Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_J11
         (373 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC016904-1|AAH16904.1|  544|Homo sapiens ACD protein protein.          29   6.3  
AY971883-1|AAX82621.1|  458|Homo sapiens adrenocortical dysplasi...    29   6.3  
AY502940-1|AAS80318.1|  544|Homo sapiens POT1 and TIN2 interacti...    29   6.3  
AK023726-1|BAB14658.1|  541|Homo sapiens B1) mRNA.  protein.           29   6.3  
BC033882-1|AAH33882.1|  309|Homo sapiens chromosome 17 open read...    28   8.4  
AK097400-1|BAC05034.1|  172|Homo sapiens protein ( Homo sapiens ...    28   8.4  

>BC016904-1|AAH16904.1|  544|Homo sapiens ACD protein protein.
          Length = 544

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 196 TKRHYHISATT*SVLPTS*TKPTRSSHNPQPHQRSVLGPRRP 321
           T R  H S T  S L +     +  SH P PHQ  V  P++P
Sbjct: 413 TPRSPHASRTPSSPLQSCTPSLSPRSHVPSPHQALVTRPQKP 454


>AY971883-1|AAX82621.1|  458|Homo sapiens adrenocortical dysplasia
           protein.
          Length = 458

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 196 TKRHYHISATT*SVLPTS*TKPTRSSHNPQPHQRSVLGPRRP 321
           T R  H S T  S L +     +  SH P PHQ  V  P++P
Sbjct: 327 TPRSPHASRTPSSPLQSCTPSLSPRSHVPSPHQALVTRPQKP 368


>AY502940-1|AAS80318.1|  544|Homo sapiens POT1 and TIN2 interacting
           protein protein.
          Length = 544

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 196 TKRHYHISATT*SVLPTS*TKPTRSSHNPQPHQRSVLGPRRP 321
           T R  H S T  S L +     +  SH P PHQ  V  P++P
Sbjct: 413 TPRSPHASRTPSSPLQSCTPSLSPRSHVPSPHQALVTRPQKP 454


>AK023726-1|BAB14658.1|  541|Homo sapiens B1) mRNA.  protein.
          Length = 541

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 196 TKRHYHISATT*SVLPTS*TKPTRSSHNPQPHQRSVLGPRRP 321
           T R  H S T  S L +     +  SH P PHQ  V  P++P
Sbjct: 410 TPRSPHASRTPSSPLQSCTPSLSPRSHVPSPHQALVTRPQKP 451


>BC033882-1|AAH33882.1|  309|Homo sapiens chromosome 17 open reading
           frame 83 protein.
          Length = 309

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 369 HGSEHSGKRCVFCPLTWPPWTED 301
           H    S  RC  CP+ W P T+D
Sbjct: 112 HRRRGSPTRCAHCPVAWAPDTDD 134


>AK097400-1|BAC05034.1|  172|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40081 fis, clone TESTI2001823. ).
          Length = 172

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 369 HGSEHSGKRCVFCPLTWPPWTED 301
           H    S  RC  CP+ W P T+D
Sbjct: 61  HRRRGSPTRCAHCPVAWAPDTDD 83


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,471,001
Number of Sequences: 237096
Number of extensions: 746912
Number of successful extensions: 2224
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2210
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)