Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_J06
(611 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 44 2e-06
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 38 6e-05
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 35 7e-04
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 1.8
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 1.8
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 4.1
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 21 7.2
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 9.5
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 43.6 bits (98), Expect = 2e-06
Identities = 45/178 (25%), Positives = 66/178 (37%), Gaps = 8/178 (4%)
Frame = +3
Query: 102 LKDQPAEVLFKENNPTVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRK--DEGSLVF 275
+K+ P V F V+EC GN Q + DG + LR+ G+LVF
Sbjct: 6 VKEPPNRVDFSNGTGAVVECQARGNPQPDIIWVRADGSAVG---DVPGLRQVLPNGNLVF 62
Query: 276 LRPQASDEGQ------YQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQL 437
+A D Q Y C A +PAG SR ++ R +++ I G L
Sbjct: 63 PPFRAEDYRQEVHAQVYSCLARSPAGSVHSRDVNVRAVVAQYYDTDVNKEYAIRGNSAIL 122
Query: 438 DCVQPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYK 611
CV P+ + + D+D + P G L+ V ED Y+
Sbjct: 123 KCVVPSFVADFVKVLSWHTDQGEEFVPGDDYDGKYLVLPSGELHIRDVGPEDGYKTYQ 180
Score = 43.6 bits (98), Expect = 2e-06
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Frame = +3
Query: 153 LECLIEGNDQGVKYSWQKDGKSFNWQEHNAALR-KDEGSLVFLRP-QASDEGQYQCFAET 326
L+C++ D + W G+ A + D S++ + A G+Y C AE
Sbjct: 603 LQCIVPTGDLPLNIRWSYPGEEMGGSSGVLAKKVADRVSMLMISVITARHAGEYVCTAEN 662
Query: 327 PAGVAS-SRVISFR-KTYLIASPAKTHEKTPIEGRPFQLDCVQPNAYPKPLITWKKRLSG 500
AG AS S ++ I P +K +G +++C + + +PKP +TWKK +
Sbjct: 663 AAGTASHSTTLTVNVPPRWILEPT---DKAFAQGSDARVEC-KADGFPKPQVTWKK--AA 716
Query: 501 ADPNADVTD 527
D D TD
Sbjct: 717 GDTPGDYTD 725
Score = 36.3 bits (80), Expect = 2e-04
Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 6/142 (4%)
Frame = +3
Query: 111 QPAEVLFKENNPTVLECLIEGNDQGVKYSWQK-----DGKSFNWQEHNAALRKDEGSLVF 275
+P + F + + +EC +G + + +W+K G + + N + ++G+L
Sbjct: 684 EPTDKAFAQGSDARVECKADGFPKP-QVTWKKAAGDTPGDYTDLKLSNPDISVEDGTLSI 742
Query: 276 LRPQASDEGQYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVQPN 455
Q ++EG Y C A G S VI K +T G P L C
Sbjct: 743 NNIQKTNEGYYLCEAVNGIGAGLSAVIFISVQAPPHFEIKLKNQTARRGEPAVLQCEAQG 802
Query: 456 AYPKPL-ITWKKRLSGADPNAD 518
KP+ I W DP +D
Sbjct: 803 --EKPIGILWNMNNKRLDPKSD 822
Score = 33.5 bits (73), Expect = 0.002
Identities = 39/139 (28%), Positives = 54/139 (38%), Gaps = 7/139 (5%)
Frame = +3
Query: 111 QPAEVLFKENNPTVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDEGSLVFLRPQA 290
+P+ P C + GN SW KDGK +E A LR + +
Sbjct: 313 EPSTQTIDFGRPATFTCNVRGNPIKT-VSWLKDGKPLGLEE--AVLRIES-------VKK 362
Query: 291 SDEGQYQCFAETPAGVASSRVISFRKTYLIASPAKTH----EKTPIEGRPFQLDCVQPNA 458
D+G YQCF S++ + K P + E+T G L CV +
Sbjct: 363 EDKGMYQCFVRNDQ--ESAQATAELKLGGRFEPPQIRQAFAEETLQPGPSMFLKCV-ASG 419
Query: 459 YPKPLITWK---KRLSGAD 506
P P ITW+ KRLS +
Sbjct: 420 NPTPEITWELDGKRLSNTE 438
Score = 29.5 bits (63), Expect = 0.027
Identities = 19/84 (22%), Positives = 32/84 (38%)
Frame = +3
Query: 237 NAALRKDEGSLVFLRPQASDEGQYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPI 416
N +R+ G+L+ + D G+Y C G S + T + + + +T
Sbjct: 262 NERVRQVSGTLIIREARVEDSGKYLCIVNNSVGGESVETV-LTVTAPLGAEIEPSTQTID 320
Query: 417 EGRPFQLDCVQPNAYPKPLITWKK 488
GRP C P ++W K
Sbjct: 321 FGRPATFTC-NVRGNPIKTVSWLK 343
Score = 25.8 bits (54), Expect = 0.33
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +3
Query: 258 EGSLVFLRPQASDEGQYQCFAETPAG 335
EGSL +D G+Y C+ E G
Sbjct: 1328 EGSLFIKEVDRTDAGEYSCYVENTFG 1353
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 38.3 bits (85), Expect = 6e-05
Identities = 31/118 (26%), Positives = 44/118 (37%), Gaps = 4/118 (3%)
Frame = +3
Query: 147 TVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDE-GSLVFLRPQASD-EGQYQCFA 320
T L C + D + SW KDG++ E D+ S++ + + D G Y C A
Sbjct: 628 TTLTCSVTRGDLPLSISWLKDGRAMGPSERVHVTNMDQYNSILMIEHLSPDHNGNYSCVA 687
Query: 321 ETPAGVAS--SRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVQPNAYPKPLITWKK 488
A S R++ I P + + L C Q P P I WKK
Sbjct: 688 RNLAAEVSHTQRLVVHVPPRWIVEPTDVSVE---RNKHVALHC-QAQGVPTPTIVWKK 741
Score = 34.7 bits (76), Expect = 7e-04
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +3
Query: 294 DEGQYQCFAETPAG--VASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVQPNAYPK 467
D G+Y C AE AG ++R+ + Y+ P + T + G +L C YP
Sbjct: 493 DGGEYSCMAENRAGKVTHAARLNVYGLPYIRLIP----KVTAVAGETLRLKC-PVAGYPI 547
Query: 468 PLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIY 608
I W++ N ++ D D R PDG L T V K+ + +Y
Sbjct: 548 EEIKWER------ANRELPD-DLRQKVLPDGTLVITSVQKKGDAGVY 587
Score = 26.2 bits (55), Expect = 0.25
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = +3
Query: 96 PVLKDQPAEVLFKENNPTVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDEGSLVF 275
PV+ + V ++ T L C+ + +Y W S + + GS++
Sbjct: 238 PVILENSGVVHVAQDESTSLVCVAQACPTP-EYRWYAQTGSEPMLVLSGPRTRLLGSVLA 296
Query: 276 LRPQA-SDEGQYQCFAETPAGVASSRV 353
L D G Y+C A P G AS+ +
Sbjct: 297 LEAVTLEDNGIYRCSASNPGGEASAEI 323
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 34.7 bits (76), Expect = 7e-04
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +3
Query: 294 DEGQYQCFAETPAG--VASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLDCVQPNAYPK 467
D G+Y C AE AG ++R+ + Y+ P + T + G +L C YP
Sbjct: 493 DGGEYSCMAENRAGKVTHAARLNVYGLPYIRLIP----KVTAVAGETLRLKC-PVAGYPI 547
Query: 468 PLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIY 608
I W++ N ++ D D R PDG L T V K+ + +Y
Sbjct: 548 EEIKWER------ANRELPD-DLRQKVLPDGTLVITSVQKKGDAGVY 587
Score = 32.7 bits (71), Expect = 0.003
Identities = 37/140 (26%), Positives = 53/140 (37%), Gaps = 9/140 (6%)
Frame = +3
Query: 96 PVLKDQPAEVLFKENNPTVLECLIEGNDQGVKYSWQKDGKS-F----NWQEHNAALRKDE 260
P+++ + E T C + D + SW KDG+S F N N +
Sbjct: 611 PIIEPFTFQEGLSEGMRTRTVCGVAAGDPPLTISWLKDGQSPFPLPPNLASANISQLDPY 670
Query: 261 GSLVFLRPQASD-EGQYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPI---EGRP 428
SL+ + A++ G Y C A PA + V K + P E T + +
Sbjct: 671 SSLLSITNLAAEHSGDYTCVAANPA----AEVRYTAKLQVKVPPRWIVEPTDVSVERNKH 726
Query: 429 FQLDCVQPNAYPKPLITWKK 488
L C Q P P I WKK
Sbjct: 727 VALHC-QAQGVPTPTIVWKK 745
Score = 26.2 bits (55), Expect = 0.25
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
Frame = +3
Query: 96 PVLKDQPAEVLFKENNPTVLECLIEGNDQGVKYSWQKDGKSFNWQEHNAALRKDEGSLVF 275
PV+ + V ++ T L C+ + +Y W S + + GS++
Sbjct: 238 PVILENSGVVHVAQDESTSLVCVAQACPTP-EYRWYAQTGSEPMLVLSGPRTRLLGSVLA 296
Query: 276 LRPQA-SDEGQYQCFAETPAGVASSRV 353
L D G Y+C A P G AS+ +
Sbjct: 297 LEAVTLEDNGIYRCSASNPGGEASAEI 323
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.4 bits (48), Expect = 1.8
Identities = 12/54 (22%), Positives = 21/54 (38%)
Frame = +3
Query: 198 WQKDGKSFNWQEHNAALRKDEGSLVFLRPQASDEGQYQCFAETPAGVASSRVIS 359
W+++G ++GSL + Q G Y C A V + V++
Sbjct: 344 WRRNGADLETLNEPEIRVFNDGSLYLTKVQLIHAGNYTCHAVRNQDVVQTHVLT 397
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 309 GIGPRQTLAVSGIPGILHLCG 247
GIGP++ L GIP ++ L G
Sbjct: 334 GIGPKEHLRSLGIPVVVDLPG 354
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.2 bits (45), Expect = 4.1
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 346 ELATPAGVSAKHWYWPSSDACGLRNTRDPSSLRRAALC 233
EL+ P ++ + SSD C R + P+ ++ LC
Sbjct: 154 ELSQPGSLNG----YGSSDGCDARKKKGPTPRQQEELC 187
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = +3
Query: 60 IIVGSALPVDKYPVLKDQPAEVLFKENNPT 149
+++G+ +DK+ A + K+N PT
Sbjct: 203 VLIGAPNEIDKFYGTPGYTAPEVIKQNRPT 232
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.0 bits (42), Expect = 9.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 138 SP*RGPRPVGLSAPGIYPREALSPQ 64
SP P G S P +YP SPQ
Sbjct: 380 SPYGYPIGSGGSFPSLYPMATTSPQ 404
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,233
Number of Sequences: 438
Number of extensions: 3811
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -