Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_J03
(571 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81086-7|CAB03118.2| 316|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 29 2.4
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 29 2.4
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 29 2.4
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 29 2.4
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 29 2.4
U53335-2|AAU87823.1| 190|Caenorhabditis elegans Hypothetical pr... 27 7.2
>Z81086-7|CAB03118.2| 316|Caenorhabditis elegans Hypothetical
protein F53B6.7 protein.
Length = 316
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = -3
Query: 278 VDGVLKIFSFPPRE*SFRSRKSVCAAVADAPILSLQKYMF*SKPF 144
VD +L+ P + +F S K A + D+PIL L K ++ KPF
Sbjct: 252 VDDILQCIKKPTCQMNFISLKKGEAQIMDSPILPLTKSLYLVKPF 296
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 290 LTPVGR-SLRLPSLNPLGNRALVSLSLNISN*IVLRLVSRYFCIK 421
+TP R L +PS PL R + L +SN I LR+ Y C++
Sbjct: 652 ITPASRRDLTIPS-RPLDERTSILLGDTVSNLISLRIPQGYRCVE 695
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 290 LTPVGR-SLRLPSLNPLGNRALVSLSLNISN*IVLRLVSRYFCIK 421
+TP R L +PS PL R + L +SN I LR+ Y C++
Sbjct: 650 ITPASRRDLTIPS-RPLDERTSILLGDTVSNLISLRIPQGYRCVE 693
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 290 LTPVGR-SLRLPSLNPLGNRALVSLSLNISN*IVLRLVSRYFCIK 421
+TP R L +PS PL R + L +SN I LR+ Y C++
Sbjct: 652 ITPASRRDLTIPS-RPLDERTSILLGDTVSNLISLRIPQGYRCVE 695
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 290 LTPVGR-SLRLPSLNPLGNRALVSLSLNISN*IVLRLVSRYFCIK 421
+TP R L +PS PL R + L +SN I LR+ Y C++
Sbjct: 652 ITPASRRDLTIPS-RPLDERTSILLGDTVSNLISLRIPQGYRCVE 695
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 290 LTPVGR-SLRLPSLNPLGNRALVSLSLNISN*IVLRLVSRYFCIK 421
+TP R L +PS PL R + L +SN I LR+ Y C++
Sbjct: 650 ITPASRRDLTIPS-RPLDERTSILLGDTVSNLISLRIPQGYRCVE 693
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 290 LTPVGR-SLRLPSLNPLGNRALVSLSLNISN*IVLRLVSRYFCIK 421
+TP R L +PS PL R + L +SN I LR+ Y C++
Sbjct: 652 ITPASRRDLTIPS-RPLDERTSILLGDTVSNLISLRIPQGYRCVE 695
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 290 LTPVGR-SLRLPSLNPLGNRALVSLSLNISN*IVLRLVSRYFCIK 421
+TP R L +PS PL R + L +SN I LR+ Y C++
Sbjct: 652 ITPASRRDLTIPS-RPLDERTSILLGDTVSNLISLRIPQGYRCVE 695
>U53335-2|AAU87823.1| 190|Caenorhabditis elegans Hypothetical
protein C55C3.7 protein.
Length = 190
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = -2
Query: 300 TGVKVQ*RGWSLENIQFPAQRVVVSIEEVCVCGGR*CTNLVPAEIY 163
T + Q GW L+N Q+ R +++ C C G+ T + Y
Sbjct: 77 TALMSQWTGWQLQNSQWARTRDCLTVSIGCPCTGQTLTQTQATDAY 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,191,783
Number of Sequences: 27780
Number of extensions: 241538
Number of successful extensions: 473
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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