Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_J03
         (571 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    24   0.92 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   2.8  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   8.6  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   8.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.6  

>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 24.2 bits (50), Expect = 0.92
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -2

Query: 537 IVTLTYLWIKXXXXXXHLKFSLNILAH 457
           ++TLT LW+        +  S+N++ H
Sbjct: 268 LLTLTVLWLDSRSTERMIAASVNLICH 294


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 120 MNKLLDTDKW 149
           MN LLDTD+W
Sbjct: 61  MNYLLDTDQW 70


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/26 (34%), Positives = 10/26 (38%)
 Frame = +2

Query: 392 RLVSRYFCIKYCNVNITGGIY*CAKI 469
           R     F   YCN     G Y C K+
Sbjct: 208 RFTLEKFFTDYCNSKTNTGEYSCLKV 233


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/26 (34%), Positives = 10/26 (38%)
 Frame = +2

Query: 392 RLVSRYFCIKYCNVNITGGIY*CAKI 469
           R     F   YCN     G Y C K+
Sbjct: 208 RFTLEKFFTDYCNSKTNTGEYSCLKV 233


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -1

Query: 472 KYFGALIYTSCYIYITIL 419
           K+ G  +YT+C I++  +
Sbjct: 706 KFIGFTMYTTCIIWLAFV 723


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -1

Query: 472 KYFGALIYTSCYIYITIL 419
           K+ G  +YT+C I++  +
Sbjct: 796 KFIGFTMYTTCIIWLAFV 813


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,253
Number of Sequences: 438
Number of extensions: 2969
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)