Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_J01
         (562 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC609.02 |ptn1||phosphatidylinositol-3,4,5-trisphosphate3-phos...    27   2.5  
SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak...    26   4.4  
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb...    26   4.4  
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ...    25   7.6  

>SPBC609.02 |ptn1||phosphatidylinositol-3,4,
           5-trisphosphate3-phosphatase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 348

 Score = 26.6 bits (56), Expect = 2.5
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 464 DRIFISSAKTTKIIHGKVHDGHTAKVLCFHVTSF 363
           D +F +    T ++H K   G T  V+C ++ +F
Sbjct: 114 DALFQTQPLLTLVVHCKAGKGRTGTVICSYLVAF 147


>SPBC1861.03 |mak10||NatC N-acetyltransferase complex subunit Mak10
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 708

 Score = 25.8 bits (54), Expect = 4.4
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +1

Query: 97  ILILKNHPLQRHMSNYQYCIN*SRI 171
           +LIL +H L   ++ YQ+C++ +R+
Sbjct: 328 LLILNSHTLASSLAVYQFCLDFTRL 352


>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1379

 Score = 25.8 bits (54), Expect = 4.4
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 342  LRKKPRSHLHHYHQEGGRHRSLEN 271
            LR   + H H YH++ G+++S  N
Sbjct: 1190 LRVPQKKHKHFYHRDDGKYKSGTN 1213


>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 965

 Score = 25.0 bits (52), Expect = 7.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 357 RPCQDLRKKPRSHLHHYHQEGGRHRSLENN 268
           R  Q L ++  S     H++ G H S +NN
Sbjct: 102 RASQSLLRRSSSFFRRRHRKNGTHASTDNN 131


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,254,813
Number of Sequences: 5004
Number of extensions: 45241
Number of successful extensions: 104
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 104
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 236012634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)