Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_I23
         (600 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AF025471-1|AAB71058.1|  379|Caenorhabditis elegans Hypothetical ...    30   1.1  
Z80221-1|CAB02309.1|  690|Caenorhabditis elegans Hypothetical pr...    29   1.9  
U39472-11|AAP86619.2|  355|Caenorhabditis elegans Serpentine rec...    29   2.5  
AL032631-11|CAB63341.1|  975|Caenorhabditis elegans Hypothetical...    29   3.3  
AF016442-9|AAB65921.1|  714|Caenorhabditis elegans Hypothetical ...    29   3.3  

>Z32681-6|CAA83605.1|  257|Caenorhabditis elegans Hypothetical
           protein F56F3.5 protein.
          Length = 257

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 22/71 (30%), Positives = 31/71 (43%)
 Frame = -2

Query: 539 DGADKTSHRVSWRIYPLWEKNRVYIKILNIHRNQYLKLEIKSDVDGDHKAFGADADDTYR 360
           D   K   +   ++YPL E   VYI+ + I +   + L    D+ GD    GAD +   R
Sbjct: 189 DSIGKDIEKTCSKLYPLQE---VYIRKVKIIKRPKVDLGRLHDLHGDSITVGADGEKVDR 245

Query: 359 HQWYLHPVLLE 327
              Y  PV  E
Sbjct: 246 PDDYEPPVQQE 256


>AF025471-1|AAB71058.1|  379|Caenorhabditis elegans Hypothetical
           protein R52.3 protein.
          Length = 379

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 263 VDSDGDRQLWGHNGVADNPEHFGWHI 186
           V  +G  +L+G   V DNP  +GWHI
Sbjct: 291 VSPNGRSELFGGTYVFDNPNIYGWHI 316


>Z80221-1|CAB02309.1|  690|Caenorhabditis elegans Hypothetical
           protein ZC247.2 protein.
          Length = 690

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = -3

Query: 202 ISDGTLHHFSKILQ*IEVQNYNLFRNMCHIMLSMYHCIPYYTLRDATYIILYK 44
           +SD  LH+ + +L  I++   N    M  ++     C PY  + D T+I+L K
Sbjct: 512 VSDPGLHYATSVLTNIQMHILNPVDIMRAVLDEGVCCFPYGVILDKTFILLDK 564


>U39472-11|AAP86619.2|  355|Caenorhabditis elegans Serpentine
           receptor, class a (alpha)protein 34 protein.
          Length = 355

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
 Frame = -3

Query: 211 ILNISDGTLHHFSKILQ*IEVQNYNLFRNM------CHIMLSMYHCIPYYT 77
           + +++ G++H F        +QN++L R++      C IM + Y C P+YT
Sbjct: 65  VASLAVGSIHEFLYGF----IQNWSLLRSLVYWDQPCKIMFNEYECYPFYT 111


>AL032631-11|CAB63341.1|  975|Caenorhabditis elegans Hypothetical
           protein Y106G6H.12 protein.
          Length = 975

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
 Frame = -2

Query: 590 LKLQLSMDNDGDRASFGDGADKTSHRVSWRIYPLWEKNRVYIKILNIHRNQ-----YLKL 426
           LK Q+   +D  R     G DK  +       P+ + +    K+LNI  N+     Y+KL
Sbjct: 2   LKRQIEFTSDSIRFRCPGGGDKEYYYTQMMYKPIADNSHTGAKLLNIELNKQCEESYIKL 61

Query: 425 EIKS 414
           E  S
Sbjct: 62  EFTS 65


>AF016442-9|AAB65921.1|  714|Caenorhabditis elegans Hypothetical
           protein K12B6.8 protein.
          Length = 714

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 413 DVDGDHKAFGADADDTYRHQWYLH 342
           D  G+H+ FG DA   Y +Q+YL+
Sbjct: 82  DFPGNHQYFGIDASVPYNNQFYLN 105


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,029,681
Number of Sequences: 27780
Number of extensions: 275229
Number of successful extensions: 615
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)