Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_I23
         (600 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    25   0.43 
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   3.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   4.0  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   9.2  

>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 201 FRMAHCTISVKFCSRLKCKITIY 133
           +R A+CT + K+C  LK  +  Y
Sbjct: 45  YRCANCTYATKYCHSLKLHLRKY 67


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 374 LHQLQTLYDHRLH 412
           L +LQT YD RLH
Sbjct: 109 LRELQTDYDRRLH 121


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 159 YCKILLKWCNVPSEMFRIVGDSIMS 233
           YC   +KW N    +F++V    +S
Sbjct: 473 YCPRYIKWTNRERGVFKLVDSKAVS 497


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = -3

Query: 250 AIDNCGDIMESPTILNISDGTLHH 179
           A+D+ G +++ P    + +  +HH
Sbjct: 147 AVDHQGSVLDGPDSPPLVESQMHH 170


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,529
Number of Sequences: 438
Number of extensions: 3731
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)