Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_I22
(399 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0625 - 21331209-21331273,21331364-21331555,21332348-213325... 31 0.34
12_02_0518 - 19937507-19938481,19938805-19939151,19939246-19939387 29 1.4
09_06_0344 - 22419152-22419250,22419460-22419554,22419952-224201... 28 2.4
06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281 28 2.4
06_01_0682 + 5002036-5002573,5002875-5002966 28 2.4
04_03_0280 + 13854758-13855585 28 3.1
08_02_1426 + 27009720-27010787,27011846-27012517,27012999-270137... 27 4.1
06_03_0821 - 25003001-25003336,25004248-25004376,25004984-250050... 27 5.5
06_01_0680 + 4983054-4983080,4983243-4983590 27 5.5
02_03_0202 + 16359539-16359763,16360113-16360193,16361362-163616... 27 5.5
11_03_0099 - 9983044-9983052,9983145-9983939,9984031-9984301,998... 27 7.2
10_08_0836 - 20922861-20923096,20923193-20923340,20923541-209236... 27 7.2
10_08_0230 + 16023569-16024177 27 7.2
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 27 7.2
04_04_0958 - 29690164-29690622 27 7.2
04_04_0064 + 22446902-22447045,22448323-22448380,22448398-224485... 27 7.2
02_05_0192 + 26602247-26602617,26602701-26603016 27 7.2
06_01_0738 + 5458182-5458374,5460512-5461766,5461861-5462053,546... 26 9.5
06_01_0267 - 1972988-1973148,1973275-1973403,1973881-1974024,197... 26 9.5
05_03_0378 - 13278428-13279310,13279411-13279500,13279787-13279866 26 9.5
01_06_1616 + 38670457-38670885,38670989-38671365,38672593-386726... 26 9.5
>12_02_0625 -
21331209-21331273,21331364-21331555,21332348-21332558,
21333600-21333700,21333839-21333844,21333956-21334051,
21334485-21334497
Length = 227
Score = 31.1 bits (67), Expect = 0.34
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -2
Query: 197 VPHTGSTCRQVWSSAYLLADIKGSVCILIRPIQP 96
VP TG+ +W SA+L AD+ GS +IRP +P
Sbjct: 25 VPATGALRVWIWDSAHLQADLLGSP--VIRPSEP 56
>12_02_0518 - 19937507-19938481,19938805-19939151,19939246-19939387
Length = 487
Score = 29.1 bits (62), Expect = 1.4
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Frame = +3
Query: 3 QFFNDDRGKLEGQAYGTRVLGPAGDTSN---FGGRLDWSNKNANA---ALDISKQIGGRP 164
QFF G YG RVL AG SN G + + A++ A+ ++ ++G RP
Sbjct: 288 QFFQQASGIDSVVLYGPRVLAAAGVASNTLLLGLNVVFGVAKASSILVAMALTDRVGRRP 347
Query: 165 NLSASGAGVWNFDKNTRLSAGGSLSTMGRGKPDVA 269
L AS G+ + L+ G + G + D A
Sbjct: 348 LLLASTGGM----TASLLALGSVFAAFGGARDDAA 378
>09_06_0344 -
22419152-22419250,22419460-22419554,22419952-22420108,
22420825-22420869,22421080-22421211,22421496-22421594,
22421690-22421785,22421968-22422149,22422242-22422494,
22422867-22422974,22423037-22423094,22423462-22423613,
22423698-22423792,22424172-22424287,22424369-22424495,
22424565-22424661,22424745-22424913,22425879-22426027
Length = 742
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 8/55 (14%)
Frame = -3
Query: 181 PLADRFGLPPICLLISRAAFAFLL--------DQSNLPPKFEVSPAGPKTLVPYA 41
PL+ +G P+C L++ F FLL D S+L P +V+P L+ +A
Sbjct: 9 PLSGAYGEGPLCYLLAVDGFRFLLDCGWTDLCDPSHLQPLAKVAPTIDAVLLSHA 63
>06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281
Length = 518
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 105 WSNKNANAALDISKQIGGRPNLSASGAGVW-NFDKNT-RLSAGGS 233
WSN N+N+ + IG N + S +G W N NT LS GS
Sbjct: 416 WSNSNSNSGSTMPSGIGVASN-AGSSSGSWSNAGSNTGTLSGAGS 459
>06_01_0682 + 5002036-5002573,5002875-5002966
Length = 209
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -3
Query: 229 PPADKRVFLSKFHTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLV 50
P + KR++L ++TP A F ICL A +S PP P+ ++
Sbjct: 34 PNSRKRIWLGSYYTPEKAARAFDAAFICLRGGEAIAGLNFTES--PPAVVARTTDPREVL 91
Query: 49 PYA 41
+A
Sbjct: 92 AFA 94
>04_03_0280 + 13854758-13855585
Length = 275
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 136 SRAAFAFLLDQSNLPPKFEVSPAGPKTLVPYACPSNL 26
S F ++D+S L P+ + A P +VP+ C L
Sbjct: 144 SGGRFVVIVDESKLVPRLGCTGAVPVEVVPFGCDHTL 180
>08_02_1426 +
27009720-27010787,27011846-27012517,27012999-27013793,
27014914-27014943,27018095-27019987
Length = 1485
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 96 CLRSLRCRLPDPKPWCRMLALPTYRDRH 13
CL+ RL P W R L+ T R+RH
Sbjct: 82 CLQDYVVRLEKPSWWRRRLSCTTLRERH 109
>06_03_0821 -
25003001-25003336,25004248-25004376,25004984-25005040,
25005435-25005539
Length = 208
Score = 27.1 bits (57), Expect = 5.5
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +3
Query: 54 RVLGPAGDTSNFGGRLDWSNKNANAALDISKQIGGRPNLSASGAGVWN--FDKNTRLSAG 227
R+ P G S+FGG W A KQI GR + + SGA WN D ++ LS+
Sbjct: 150 RIRAPTG-WSSFGG-CGWLEDRPPATR--LKQIEGRSSAAWSGAREWNTSSDNSSTLSSS 205
Query: 228 GS 233
+
Sbjct: 206 NA 207
>06_01_0680 + 4983054-4983080,4983243-4983590
Length = 124
Score = 27.1 bits (57), Expect = 5.5
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = -3
Query: 229 PPADKRVFLSKFHTPAPLADRFGLPPICLLISRAAFAFLLDQSNLPPKFEVSPAGPKTLV 50
P + KR++L + +P A F ICL A +S PP + P+ ++
Sbjct: 40 PNSLKRIWLGSYDSPEKAARAFDAAFICLRGGEAIAGLNFPES--PPTVVARTSDPREVL 97
Query: 49 PYACPSNLPRSSLKNC 2
YA S+ R +C
Sbjct: 98 AYA-TSHANRLGCHHC 112
>02_03_0202 +
16359539-16359763,16360113-16360193,16361362-16361600,
16361828-16362029,16362108-16362188,16362272-16362455,
16362625-16362791,16363020-16363802
Length = 653
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 34 KGKHTAPGFWVRQATPQTSEAGWIGL 111
KG H PG W+ A + G IGL
Sbjct: 598 KGPHDVPGHWLVTAAKLVKDGGKIGL 623
>11_03_0099 -
9983044-9983052,9983145-9983939,9984031-9984301,
9984857-9985056
Length = 424
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +1
Query: 31 WKGKHTAPGFWVRQATPQTSEAGWIGLIRMQTLPLISASK*AEDQT 168
W+G APG W A PQ +A + P ++ K D++
Sbjct: 10 WQGTAAAPGGWQGMAPPQPPQAPLFAYGANTSAPHLAQMKQGSDRS 55
>10_08_0836 -
20922861-20923096,20923193-20923340,20923541-20923621,
20924407-20924532
Length = 196
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -3
Query: 187 PAPLADRFGLPPICLLISRAAFAFLLDQSNLPPK--FEVSPAGP 62
PAP+ GL P+C +S + A + QS+ PP F + GP
Sbjct: 53 PAPI----GLVPVCSAVSASQVANPISQSSTPPMWFFNFNRNGP 92
>10_08_0230 + 16023569-16024177
Length = 202
Score = 26.6 bits (56), Expect = 7.2
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +3
Query: 24 GKLEGQAYGTRVLGPAGDTSNFGGRLDWSNKNANAALDISKQIGGRPNLSASGAG 188
G + G G+ A +TS+ GG SN +ANA S GG SG+G
Sbjct: 44 GSVSGAGSGSGGGFGASNTSSSGGYFGTSNAHANAGGGGSGDGGGPLGSVGSGSG 98
>07_03_0965 - 22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +3
Query: 39 QAYGTRVLGPAGDTSNFGGRLDWSNK----NANAALDISKQIGGRPNLSASGAGV 191
Q + +GP + S GG L S+ + + + +SK GG P S S GV
Sbjct: 1360 QPQSSSKMGPVTNMSTGGGDLSRSSNAPVASGSPSNSVSKSTGGSPPASGSAKGV 1414
>04_04_0958 - 29690164-29690622
Length = 152
Score = 26.6 bits (56), Expect = 7.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 109 DQSNLPPKFEVSPAGPKTLVPYAC 38
+ S+LPP E P P+++ PY C
Sbjct: 32 EASSLPPPPEPVPVFPRSVSPYVC 55
>04_04_0064 +
22446902-22447045,22448323-22448380,22448398-22448528,
22449267-22449332,22449423-22449510,22450088-22450158,
22450243-22450302,22450418-22450523,22450649-22450686,
22450990-22451082,22451156-22451220,22451633-22451645,
22451733-22451813,22452200-22452308,22452423-22452544
Length = 414
Score = 26.6 bits (56), Expect = 7.2
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 24 GKLEGQAYGTRVLGPAGDTSNFGGRLDWSNKNANAALDIS 143
GK+ G AYGT + P F RL+ SNK +A+ I+
Sbjct: 376 GKMSGHAYGTWNIPPLIRDEEF-FRLERSNKRDASAITIT 414
>02_05_0192 + 26602247-26602617,26602701-26603016
Length = 228
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 25 VSWKGKHTAPGFWVRQATPQTSEAG 99
V W+G+ +A W R+A P +EAG
Sbjct: 147 VGWRGRRSA---WRREAQPMAAEAG 168
>06_01_0738 +
5458182-5458374,5460512-5461766,5461861-5462053,
5462151-5462344,5462443-5462601,5462683-5463025
Length = 778
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 75 DTSNFGGRL-DWSNKNANAALDISKQIGGRPNLSASGAGVWNFDKNTRLSAG 227
DT+ G + SN+ A+ A+ ++K+ GG P+ + + N + SAG
Sbjct: 306 DTNKASGNVASTSNQTASTAM-VAKKAGGSPSKNQTSVASTNSKNQNQTSAG 356
>06_01_0267 -
1972988-1973148,1973275-1973403,1973881-1974024,
1974368-1974493,1974595-1974720,1975149-1975241,
1975465-1975606,1976747-1976878,1976943-1977080,
1977431-1977523,1978186-1978389,1978568-1978656,
1978839-1978988,1979088-1979253,1979355-1979576,
1979687-1979872,1980289-1980411,1980511-1980611,
1982005-1982155
Length = 891
Score = 26.2 bits (55), Expect = 9.5
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 108 SNKNANAALDISKQIGGRPNLSASGAGVWNFDKNTRL-SAGG 230
S K ANA K G+P LSA+G G + + L SAGG
Sbjct: 2 SGKVANAT---PKAAAGKPRLSAAGGGAYRRTSSGPLPSAGG 40
>05_03_0378 - 13278428-13279310,13279411-13279500,13279787-13279866
Length = 350
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = -3
Query: 229 PPADKRVFLSKFHTPAPLADRFGLPPICLLISRAA 125
PP F KF P + D GLP C +A
Sbjct: 108 PPHKVEEFWQKFRPPGTMMDSMGLPFSCFTFRASA 142
>01_06_1616 +
38670457-38670885,38670989-38671365,38672593-38672640,
38673200-38673242,38673673-38673786,38674049-38674348
Length = 436
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 138 ISKQIGGRPNLSASGAGVWNFDKNTRLSAGGSLSTMG 248
+S+ G P G G + F +T ++ GG +S +G
Sbjct: 210 LSRSYEGEPIARLGGNGGYEFGYSTSMAGGGHMSGLG 246
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,745,859
Number of Sequences: 37544
Number of extensions: 280364
Number of successful extensions: 779
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 682720236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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