Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_I19
(382 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK128044-1|BAC87247.1| 1135|Homo sapiens protein ( Homo sapiens ... 29 3.8
BC021190-1|AAH21190.1| 215|Homo sapiens heart and neural crest ... 29 5.0
AF174498-1|AAF36539.1| 1381|Homo sapiens GR AF-1 specific protei... 29 5.0
AF063012-1|AAD19283.1| 215|Homo sapiens basic helix-loop-helix ... 29 5.0
AF061756-1|AAD19280.1| 215|Homo sapiens Hand1 protein protein. 29 5.0
AB014514-1|BAA31589.3| 3006|Homo sapiens KIAA0614 protein protein. 29 5.0
BC096748-1|AAH96748.1| 594|Homo sapiens POLR1B protein protein. 28 8.7
BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome proliferator... 28 8.7
BC063806-1|AAH63806.1| 1542|Homo sapiens PPRC1 protein protein. 28 8.7
BC002561-1|AAH02561.2| 659|Homo sapiens PPRC1 protein protein. 28 8.7
AL500527-6|CAH72219.1| 631|Homo sapiens peroxisome proliferator... 28 8.7
AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome proliferator... 28 8.7
AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activa... 28 8.7
AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein. 28 8.7
>AK128044-1|BAC87247.1| 1135|Homo sapiens protein ( Homo sapiens cDNA
FLJ46164 fis, clone TESTI4002799, highly similar to
DNA-directed RNA polymerase I 135 kDa polypeptide (EC
2.7.7.6). ).
Length = 1135
Score = 29.5 bits (63), Expect = 3.8
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 110 KDGDRIALF-IAESGPECLQE-KADSIKTCFTKLKDSFPNAEAANSLSTAEKCGKY-DEL 280
K GD +F I GP LQ+ D + KL+ P N L+T E Y
Sbjct: 786 KQGDSSLVFGIKPGGPRVLQKLDDDGLPFIGAKLQYGDPYYSYLN-LNTGESFVMYYKSK 844
Query: 281 TTCVVNSLEQCSNPT 325
CVV++++ CSN T
Sbjct: 845 ENCVVDNIKVCSNDT 859
>BC021190-1|AAH21190.1| 215|Homo sapiens heart and neural crest
derivatives expressed 1 protein.
Length = 215
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 146 SGPECLQEKADSIKTCFTKLKDSFPNAEAANSLS 247
SGP+ + + +SI + F +L++ PN A LS
Sbjct: 98 SGPKKERRRTESINSAFAELRECIPNVPADTKLS 131
>AF174498-1|AAF36539.1| 1381|Homo sapiens GR AF-1 specific protein
phosphatase protein.
Length = 1381
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -1
Query: 142 SDEQSDSVSIFVAYEVDELVGTVLD*SEMAACVR 41
S+++ D++ V +V EL+G L ++MAACV+
Sbjct: 101 SEDEPDTIPTSVLLQVVELLGNFLWTTDMAACVK 134
>AF063012-1|AAD19283.1| 215|Homo sapiens basic helix-loop-helix
protein HAND1 protein.
Length = 215
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 146 SGPECLQEKADSIKTCFTKLKDSFPNAEAANSLS 247
SGP+ + + +SI + F +L++ PN A LS
Sbjct: 98 SGPKKERRRTESINSAFAELRECIPNVPADTKLS 131
>AF061756-1|AAD19280.1| 215|Homo sapiens Hand1 protein protein.
Length = 215
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 146 SGPECLQEKADSIKTCFTKLKDSFPNAEAANSLS 247
SGP+ + + +SI + F +L++ PN A LS
Sbjct: 98 SGPKKERRRTESINSAFAELRECIPNVPADTKLS 131
>AB014514-1|BAA31589.3| 3006|Homo sapiens KIAA0614 protein protein.
Length = 3006
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -1
Query: 142 SDEQSDSVSIFVAYEVDELVGTVLD*SEMAACVR 41
S+++ D++ V +V EL+G L ++MAACV+
Sbjct: 1726 SEDEPDTIPTSVLLQVVELLGNFLWTTDMAACVK 1759
>BC096748-1|AAH96748.1| 594|Homo sapiens POLR1B protein protein.
Length = 594
Score = 28.3 bits (60), Expect = 8.7
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +2
Query: 110 KDGDRIALFIAESG-PECLQE-KADSIKTCFTKLKDSFPNAEAANSLSTAEKCGKY-DEL 280
K GD +F + G P LQE D + KL+ P N L+T E Y
Sbjct: 245 KQGDSSLVFGIKPGDPRVLQELDDDGLPFIGAKLQYGDPYYSYLN-LNTGESFVMYYKSK 303
Query: 281 TTCVVNSLEQCSNPT 325
CVV++++ CSN T
Sbjct: 304 ENCVVDNIKVCSNDT 318
>BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome
proliferator-activated receptor gamma,
coactivator-related 1 protein.
Length = 1664
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 27 HRAWTRTHAAISLQSRTVPTSSSTSYATKMETESLCSSLRAVLSACKRR 173
H+ W R+ + S +SR +SSS+S ++ + S SS S RR
Sbjct: 1462 HKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRR 1510
>BC063806-1|AAH63806.1| 1542|Homo sapiens PPRC1 protein protein.
Length = 1542
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 27 HRAWTRTHAAISLQSRTVPTSSSTSYATKMETESLCSSLRAVLSACKRR 173
H+ W R+ + S +SR +SSS+S ++ + S SS S RR
Sbjct: 1342 HKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRR 1390
>BC002561-1|AAH02561.2| 659|Homo sapiens PPRC1 protein protein.
Length = 659
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 27 HRAWTRTHAAISLQSRTVPTSSSTSYATKMETESLCSSLRAVLSACKRR 173
H+ W R+ + S +SR +SSS+S ++ + S SS S RR
Sbjct: 467 HKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRR 515
>AL500527-6|CAH72219.1| 631|Homo sapiens peroxisome
proliferator-activated receptor gamma,pus laevis)
protein.
Length = 631
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 27 HRAWTRTHAAISLQSRTVPTSSSTSYATKMETESLCSSLRAVLSACKRR 173
H+ W R+ + S +SR +SSS+S ++ + S SS S RR
Sbjct: 429 HKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRR 477
>AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome
proliferator-activated receptor gamma,pus laevis)
protein.
Length = 1664
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 27 HRAWTRTHAAISLQSRTVPTSSSTSYATKMETESLCSSLRAVLSACKRR 173
H+ W R+ + S +SR +SSS+S ++ + S SS S RR
Sbjct: 1462 HKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRR 1510
>AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activator
protein.
Length = 1664
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 27 HRAWTRTHAAISLQSRTVPTSSSTSYATKMETESLCSSLRAVLSACKRR 173
H+ W R+ + S +SR +SSS+S ++ + S SS S RR
Sbjct: 1462 HKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRR 1510
>AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein.
Length = 1666
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 27 HRAWTRTHAAISLQSRTVPTSSSTSYATKMETESLCSSLRAVLSACKRR 173
H+ W R+ + S +SR +SSS+S ++ + S SS S RR
Sbjct: 1464 HKRWRRSSCSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPRR 1512
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,683,272
Number of Sequences: 237096
Number of extensions: 990285
Number of successful extensions: 2786
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2786
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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