Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_I18
         (683 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70311-11|CAA94380.1|  484|Caenorhabditis elegans Hypothetical p...   245   3e-65
Z70306-6|CAA94326.1|  484|Caenorhabditis elegans Hypothetical pr...   245   3e-65
U67957-1|AAB07587.2|  324|Caenorhabditis elegans Hypothetical pr...    32   0.33 
Z66516-4|CAA91359.2|  500|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AL132943-13|CAC14396.3|  458|Caenorhabditis elegans Hypothetical...    27   9.4  
AL117207-24|CAB60398.3|  458|Caenorhabditis elegans Hypothetical...    27   9.4  
AC084197-27|AAG23467.2|  314|Caenorhabditis elegans Hypothetical...    27   9.4  
AB096637-1|BAC76737.1|  458|Caenorhabditis elegans mitochondrial...    27   9.4  

>Z70311-11|CAA94380.1|  484|Caenorhabditis elegans Hypothetical
           protein T25B9.9 protein.
          Length = 484

 Score =  245 bits (599), Expect = 3e-65
 Identities = 119/184 (64%), Positives = 145/184 (78%), Gaps = 3/184 (1%)
 Frame = +1

Query: 1   LPKIRDTAGQKGTGKWTGISALEYGVPVTLIGEAVFARCLSAIKDERVKASSTLPGSSYK 180
           +PKIRD+AGQKGTGKWT  +ALEYG+PVTLIGEAVFARCLSA+KDERV+AS  LP     
Sbjct: 250 VPKIRDSAGQKGTGKWTCFAALEYGLPVTLIGEAVFARCLSALKDERVRASKQLPRPQVS 309

Query: 181 FEG---DKKEFLEHLRKALYASKLISYAQGXMLLREAAVVNKWNLNYGSIALMWRGGCII 351
            +    DK+ F++ + KALYASK++SYAQG MLL EA+    WNLN+G+IALMWRGGCII
Sbjct: 310 PDTVVQDKRVFIKQISKALYASKIVSYAQGFMLLAEASKQFNWNLNFGAIALMWRGGCII 369

Query: 352 RSVFLGNIKDAFTKNPKLTNLLLDPFFSERISASQGSLRQVVAQAALVGVPAPAFSSGLA 531
           RS FLG+I+ AF KN +L+NLLLD FF++ I+ +Q S R VV  A  +G+P PAFSS LA
Sbjct: 370 RSRFLGDIEHAFQKNKQLSNLLLDDFFTKAITEAQDSWRVVVCAAVRLGIPVPAFSSALA 429

Query: 532 FYDG 543
           FYDG
Sbjct: 430 FYDG 433



 Score = 85.4 bits (202), Expect = 3e-17
 Identities = 36/45 (80%), Positives = 39/45 (86%)
 Frame = +2

Query: 542 GYRSNVLPANLLQAQRDYFGAHTYELLNKPGEYIHTNWTGHGGNV 676
           GY S V+PANLLQAQRDYFGAHTYELL KPG ++HTNWTG GG V
Sbjct: 433 GYTSEVVPANLLQAQRDYFGAHTYELLAKPGTWVHTNWTGTGGRV 477


>Z70306-6|CAA94326.1|  484|Caenorhabditis elegans Hypothetical
           protein T25B9.9 protein.
          Length = 484

 Score =  245 bits (599), Expect = 3e-65
 Identities = 119/184 (64%), Positives = 145/184 (78%), Gaps = 3/184 (1%)
 Frame = +1

Query: 1   LPKIRDTAGQKGTGKWTGISALEYGVPVTLIGEAVFARCLSAIKDERVKASSTLPGSSYK 180
           +PKIRD+AGQKGTGKWT  +ALEYG+PVTLIGEAVFARCLSA+KDERV+AS  LP     
Sbjct: 250 VPKIRDSAGQKGTGKWTCFAALEYGLPVTLIGEAVFARCLSALKDERVRASKQLPRPQVS 309

Query: 181 FEG---DKKEFLEHLRKALYASKLISYAQGXMLLREAAVVNKWNLNYGSIALMWRGGCII 351
            +    DK+ F++ + KALYASK++SYAQG MLL EA+    WNLN+G+IALMWRGGCII
Sbjct: 310 PDTVVQDKRVFIKQISKALYASKIVSYAQGFMLLAEASKQFNWNLNFGAIALMWRGGCII 369

Query: 352 RSVFLGNIKDAFTKNPKLTNLLLDPFFSERISASQGSLRQVVAQAALVGVPAPAFSSGLA 531
           RS FLG+I+ AF KN +L+NLLLD FF++ I+ +Q S R VV  A  +G+P PAFSS LA
Sbjct: 370 RSRFLGDIEHAFQKNKQLSNLLLDDFFTKAITEAQDSWRVVVCAAVRLGIPVPAFSSALA 429

Query: 532 FYDG 543
           FYDG
Sbjct: 430 FYDG 433



 Score = 85.4 bits (202), Expect = 3e-17
 Identities = 36/45 (80%), Positives = 39/45 (86%)
 Frame = +2

Query: 542 GYRSNVLPANLLQAQRDYFGAHTYELLNKPGEYIHTNWTGHGGNV 676
           GY S V+PANLLQAQRDYFGAHTYELL KPG ++HTNWTG GG V
Sbjct: 433 GYTSEVVPANLLQAQRDYFGAHTYELLAKPGTWVHTNWTGTGGRV 477


>U67957-1|AAB07587.2|  324|Caenorhabditis elegans Hypothetical
           protein K02H8.1 protein.
          Length = 324

 Score = 32.3 bits (70), Expect = 0.33
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +2

Query: 455 KGRCDR*SLRLPSSEYRHPLSHLASHSMMGYRSNVLPANLLQAQRDYFG 601
           KGRC R +   P  +Y HP  H+    ++  R+++   NLL AQ +  G
Sbjct: 83  KGRCTREN---PKCKYLHPPQHIKDQLLINGRNHLALKNLLSAQLNQTG 128


>Z66516-4|CAA91359.2|  500|Caenorhabditis elegans Hypothetical
           protein W03C9.6 protein.
          Length = 500

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
 Frame = +1

Query: 403 LTNLLLDPFFSERISASQGSLRQ---VVAQAALVGVPAPAFSSGLAFYDGI*VQCTTG*F 573
           L+++ LD  +S+ +     S+ Q   +VA+  ++ +  P +SSG+  Y G     T    
Sbjct: 422 LSSVALDAIYSKTLGPINQSVMQGAMIVAEDVIL-ILGPIYSSGVYTYSGFETLWTINGI 480

Query: 574 VAGSKGLFWRAHV*TLEQ 627
           V     ++W A+   L Q
Sbjct: 481 VVALGSIYWIANFSRLRQ 498


>AL132943-13|CAC14396.3|  458|Caenorhabditis elegans Hypothetical
           protein Y60A3A.13 protein.
          Length = 458

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 677 EHSHRDRSNLYGYIHRACSRVHTCARQNN 591
           +H  R  S+ Y   H  C R HT A Q+N
Sbjct: 133 DHVSRRPSDTYYVNHEHCLRAHTSAHQHN 161


>AL117207-24|CAB60398.3|  458|Caenorhabditis elegans Hypothetical
           protein Y60A3A.13 protein.
          Length = 458

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 677 EHSHRDRSNLYGYIHRACSRVHTCARQNN 591
           +H  R  S+ Y   H  C R HT A Q+N
Sbjct: 133 DHVSRRPSDTYYVNHEHCLRAHTSAHQHN 161


>AC084197-27|AAG23467.2|  314|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.21 protein.
          Length = 314

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -1

Query: 458 PCEALIRSEKKGSKSRFVNFGF 393
           PC++L  + K+G ++R  N+GF
Sbjct: 110 PCKSLCMAVKQGCENRMANYGF 131


>AB096637-1|BAC76737.1|  458|Caenorhabditis elegans mitochondrial
           phenylalanyl-tRNAsynthetase protein.
          Length = 458

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 677 EHSHRDRSNLYGYIHRACSRVHTCARQNN 591
           +H  R  S+ Y   H  C R HT A Q+N
Sbjct: 133 DHVSRRPSDTYYVNHEHCLRAHTSAHQHN 161


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,152,413
Number of Sequences: 27780
Number of extensions: 333274
Number of successful extensions: 930
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)