Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_I18
         (683 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   3.6  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          22   4.7  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   6.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.3  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   8.3  

>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -2

Query: 559 YIGPISHHRMRGQMRKRVPVL 497
           Y+  ISH + R +++KR+P L
Sbjct: 326 YVYAISHPKYRLELQKRLPWL 346


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 110 LVVFQLLKMNVSRRALLYQGHLTSL 184
           +V F+LL  N +  +++Y  HLT L
Sbjct: 78  IVYFELLPPNRTINSVVYIEHLTKL 102


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 55  ISALEYGVPVTLIGEAVFARCLSAIKDERVKASS 156
           I+ +EY +P +  G ++FAR L   +   V A+S
Sbjct: 168 IAVIEYRIPKSGKGFSLFARFLKNPRPCNVLATS 201


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = -1

Query: 671 SHRDRSNLYGYIHRACSRVHTCARQNNPFEPATN 570
           S  D   L   IHR    VH  +   +P  P +N
Sbjct: 296 SRFDEERLTLRIHRGRGSVHNGSNNGSPRSPESN 329


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +2

Query: 590 DYFGAHTYELLNKPGEYIHTNW 655
           DY   +   L N P  YIH  W
Sbjct: 444 DYIRRYLPVLKNFPTRYIHEPW 465


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,629
Number of Sequences: 438
Number of extensions: 4228
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)