Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_I15
         (583 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    22   3.8  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   5.1  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   5.1  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   6.7  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   6.7  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   6.7  

>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = +3

Query: 87  VWRYLEHFA--VPNEKLGASSAIQSTW 161
           +W Y   +   V N+K G+   +Q+TW
Sbjct: 318 IWDYDSTYIPKVKNKKAGSKHLLQNTW 344


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 172 DLFGDGFVIWYVKD 213
           DL  DGF+IW   D
Sbjct: 324 DLGADGFIIWGSSD 337


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 248 SLLPKTGPFSIRSLTYQITNPSP 180
           ++ PK   F     TY ITN +P
Sbjct: 100 NIFPKGELFDATVFTYNITNSTP 122


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 143 CNSKYMVGARTCLAMD 190
           CNSK   G  +CL +D
Sbjct: 219 CNSKTNTGEYSCLKVD 234


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 143 CNSKYMVGARTCLAMD 190
           CNSK   G  +CL +D
Sbjct: 219 CNSKTNTGEYSCLKVD 234


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
 Frame = -1

Query: 388 GCGYRPGRGHNATCRCLSSPICTGADGYELHYGCCTCLEQ-SRDR*NSPCC--RKPARFP 218
           GC  +P   +    RC S    +G+  +++   C  C E   R+   S  C   KP    
Sbjct: 42  GCVPKPIPSYACRGRCSSYLQVSGSKIWQMERSCMCCQESGEREASVSLFCPRAKPGEKK 101

Query: 217 YDL*RTKLRIHRQTGPCS 164
           +    TK  +     PC+
Sbjct: 102 FRKVITKAPLECMCRPCT 119


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,993
Number of Sequences: 438
Number of extensions: 4401
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)