Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_I08
         (569 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    24   1.2  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           23   2.1  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           23   2.1  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    22   4.9  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   4.9  

>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -2

Query: 403 K*YCSNFRIILYEIRY-NDMTMVILISISSFNP 308
           K YC+N+R + Y I Y   + + + I   +F P
Sbjct: 98  KLYCNNYRKLYYNINYIEQIPIPVPIYCGNFPP 130


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 556 YERLMEEAMKSPLNAEPVNESFHKY 482
           Y+R     M +PLN  P N+ F  +
Sbjct: 61  YQRYFTAFMDTPLNELPANKRFQAH 85


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 556 YERLMEEAMKSPLNAEPVNESFHKY 482
           Y+R     M +PLN  P N+ F  +
Sbjct: 61  YQRYFTAFMDTPLNELPANKRFQAH 85


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -3

Query: 153 CLK*CLVLVKVGGGCE 106
           C   CL L K GG CE
Sbjct: 60  CAANCLSLGKAGGHCE 75


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -3

Query: 153 CLK*CLVLVKVGGGCE 106
           C   CL L K GG CE
Sbjct: 60  CAANCLSLGKAGGHCE 75


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,297
Number of Sequences: 438
Number of extensions: 3133
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)