Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_I07
(494 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0061 + 25274693-25274794,25274982-25275069,25275186-252752... 90 1e-18
02_02_0624 - 12323702-12323777,12324219-12324304,12324360-123244... 87 7e-18
02_05_1357 + 35899480-35899578,35900247-35900334,35900438-359005... 85 2e-17
02_01_0155 - 1080923-1081024,1081111-1081176,1081306-1081370,108... 85 2e-17
06_01_0907 + 7001946-7002050,7002389-7002476,7002606-7002679,700... 84 5e-17
02_05_0708 - 31103246-31103359,31104146-31104178,31104297-311043... 81 4e-16
01_01_0909 - 7163886-7163931,7164148-7164254,7164370-7164435,716... 49 8e-13
07_01_0926 - 7775536-7775616,7775695-7775787,7775903-7775965,777... 54 8e-08
03_06_0475 + 34193951-34194023,34195414-34195486,34195572-341956... 53 1e-07
01_05_0340 - 21139885-21139978,21140169-21140272,21140379-211405... 52 2e-07
08_02_1318 - 26111031-26111276,26112139-26112427,26112936-261130... 51 4e-07
02_05_0161 + 26384079-26384086,26386173-26386226,26386376-263864... 51 4e-07
01_01_0565 - 4159946-4160042,4160140-4160243,4160378-4160533,416... 51 4e-07
06_03_0414 - 20548577-20549006,20553521-20553744 50 8e-07
05_06_0082 - 25425050-25425479,25426551-25426783 49 2e-06
10_03_0038 - 7297210-7297248,7297361-7297429,7297524-7297731,729... 48 3e-06
07_03_1397 + 26269186-26269525,26269727-26269932,26270225-262703... 48 3e-06
05_07_0127 - 27872803-27873238,27873842-27874059 48 4e-06
05_03_0590 - 15884485-15884489,15884702-15884790,15885086-158852... 48 4e-06
09_02_0464 - 9591139-9591571,9592601-9592818 48 5e-06
01_06_0712 + 31397167-31397402,31399823-31400252 48 5e-06
01_01_0893 + 7043130-7043182,7043309-7043335,7043461-7043560,704... 47 7e-06
05_01_0036 + 253734-253904,255216-255707 47 1e-05
01_06_1343 - 36461476-36461961,36463355-36463519 47 1e-05
06_03_1387 - 29820358-29821035 46 1e-05
11_03_0182 + 11307275-11307368,11307485-11307594,11307654-113078... 45 3e-05
05_05_0118 - 22504483-22504566,22504650-22504742,22504852-225049... 45 3e-05
03_01_0365 - 2839190-2839251,2839637-2839694,2839946-2840032,284... 44 5e-05
03_01_0326 + 2535800-2535938,2536891-2536959,2537310-2537375,253... 44 5e-05
04_04_0191 + 23468410-23468455,23468560-23468699,23469119-234692... 44 7e-05
10_08_0165 + 15356748-15356811,15357113-15357186,15357311-153573... 44 9e-05
09_02_0222 + 5968232-5968467,5970811-5971187,5972216-5972256,597... 44 9e-05
02_04_0402 + 22618998-22619043,22619206-22619345,22620067-226201... 44 9e-05
05_03_0286 - 11623575-11624063,11625098-11625262 43 2e-04
01_06_0186 + 27294973-27295211,27295610-27296045 42 3e-04
09_06_0029 + 20336634-20336881,20337737-20338208 41 5e-04
03_05_0601 + 26039326-26039367,26039958-26040035,26040136-260403... 40 0.001
12_02_1213 + 27058329-27058370,27058634-27058711,27058807-270589... 40 0.001
05_07_0205 - 28402436-28402505,28402604-28402681,28402789-284029... 40 0.001
07_03_0473 - 18525712-18525858,18526049-18526162,18526442-185265... 39 0.002
03_06_0501 - 34380155-34380637,34380961-34381029,34382206-343822... 31 0.002
01_05_0673 + 24183512-24183514,24183625-24183694,24184203-241842... 39 0.003
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 38 0.004
10_08_0250 - 16179646-16179759,16180197-16180325,16180519-161806... 37 0.008
05_01_0037 - 256891-256998,257347-257502,257753-257824,258737-25... 36 0.014
03_02_0046 - 5255513-5255630,5255715-5255876,5256579-5256733,525... 33 0.095
07_03_0638 + 20196216-20196650,20196810-20196930,20197072-201971... 32 0.22
07_01_0685 - 5177340-5177363,5177770-5177865,5177991-5178053,517... 30 0.89
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 30 0.89
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 30 1.2
05_06_0217 + 26457847-26457902,26458336-26458435,26458551-264586... 30 1.2
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 30 1.2
03_06_0637 - 35219212-35219754,35220405-35220587 30 1.2
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 30 1.2
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 30 1.2
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 30 1.2
10_06_0181 - 11532765-11533203,11536867-11537036 29 1.6
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 29 2.7
09_03_0056 - 11936264-11939677 28 4.7
01_05_0537 - 23019590-23020126,23020841-23021022,23021141-230213... 28 4.7
10_05_0108 - 9247498-9247854 27 6.3
08_02_0648 - 19694538-19696569,19697151-19697998 27 6.3
08_02_0627 + 19449196-19449651,19449723-19449861,19450260-194503... 27 6.3
05_04_0033 - 17369134-17369321,17369522-17370355,17370429-17373042 27 8.3
04_03_0596 - 17775203-17775247,17775772-17775830,17776093-17776609 27 8.3
03_05_0406 + 23895593-23896141 27 8.3
01_06_1448 - 37434159-37434242,37434875-37434968,37435077-374352... 27 8.3
>05_06_0061 +
25274693-25274794,25274982-25275069,25275186-25275295,
25275542-25275605,25275713-25275777,25275864-25275929,
25276084-25276199,25276382-25276415
Length = 214
Score = 89.8 bits (213), Expect = 1e-18
Identities = 37/63 (58%), Positives = 45/63 (71%)
Frame = +3
Query: 306 GTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQIDVDGEEVEMALWDT 485
G TK +K VGDG VGKTC+L YT N+FP +Y+PTVFDN+ + VDG V + LWDT
Sbjct: 3 GATKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWDT 62
Query: 486 AGQ 494
AGQ
Sbjct: 63 AGQ 65
>02_02_0624 -
12323702-12323777,12324219-12324304,12324360-12324425,
12324650-12324762,12324793-12324856,12324950-12325059,
12325473-12325560,12325651-12325749
Length = 233
Score = 87.0 bits (206), Expect = 7e-18
Identities = 37/64 (57%), Positives = 44/64 (68%)
Frame = +3
Query: 303 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQIDVDGEEVEMALWD 482
M T + +K VGDG VGKTC+L YT N FP +YVPTVFDN+ + VDG V + LWD
Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
Query: 483 TAGQ 494
TAGQ
Sbjct: 61 TAGQ 64
>02_05_1357 +
35899480-35899578,35900247-35900334,35900438-35900592,
35900652-35900715,35902910-35902974,35903061-35903126,
35903644-35903745
Length = 212
Score = 85.4 bits (202), Expect = 2e-17
Identities = 36/64 (56%), Positives = 44/64 (68%)
Frame = +3
Query: 303 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQIDVDGEEVEMALWD 482
M ++ +K VGDG VGKTC+L YT N FP +YVPTVFDN+ + VDG V + LWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
Query: 483 TAGQ 494
TAGQ
Sbjct: 61 TAGQ 64
>02_01_0155 -
1080923-1081024,1081111-1081176,1081306-1081370,
1081938-1082001,1082359-1082507,1082591-1082678,
1083757-1083855
Length = 210
Score = 85.4 bits (202), Expect = 2e-17
Identities = 36/64 (56%), Positives = 44/64 (68%)
Frame = +3
Query: 303 MGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQIDVDGEEVEMALWD 482
M ++ +K VGDG VGKTC+L YT N FP +YVPTVFDN+ + VDG V + LWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
Query: 483 TAGQ 494
TAGQ
Sbjct: 61 TAGQ 64
>06_01_0907 +
7001946-7002050,7002389-7002476,7002606-7002679,
7002829-7002892,7004355-7004419,7004557-7004622,
7004725-7004757,7004968-7005045,7005295-7005303
Length = 193
Score = 84.2 bits (199), Expect = 5e-17
Identities = 35/58 (60%), Positives = 42/58 (72%)
Frame = +3
Query: 321 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQIDVDGEEVEMALWDTAGQ 494
+K VGDG VGKTC+L YT N+FP +YVPTVFDN+ + VDG V + LWDTAGQ
Sbjct: 9 IKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVVVDGTTVNLGLWDTAGQ 66
>02_05_0708 -
31103246-31103359,31104146-31104178,31104297-31104362,
31104532-31104596,31105456-31105519,31105629-31105738,
31105886-31105973,31106328-31106432
Length = 214
Score = 81.4 bits (192), Expect = 4e-16
Identities = 33/58 (56%), Positives = 41/58 (70%)
Frame = +3
Query: 321 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQIDVDGEEVEMALWDTAGQ 494
+K VGDG VGKTC+L YT N+FP +Y+PTVFDN+ + VD V + LWDTAGQ
Sbjct: 9 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVDSTTVNLGLWDTAGQ 66
>01_01_0909 -
7163886-7163931,7164148-7164254,7164370-7164435,
7164720-7164784,7164937-7165000,7165685-7165794,
7165972-7166059,7166100-7166297
Length = 247
Score = 48.8 bits (111), Expect(2) = 8e-13
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +3
Query: 402 EYVPTVFDNYVGQIDVDGEEVEMALWDTAGQ 494
+Y+PTVFDN+ + VDG V + LWDTAGQ
Sbjct: 67 DYIPTVFDNFSANVSVDGSVVNLGLWDTAGQ 97
Score = 41.5 bits (93), Expect(2) = 8e-13
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 312 TKRLKITVVGDGMVGKTCLLYVYTRNEFP 398
T+ +K VGDG VGKTC+L YT N+FP
Sbjct: 8 TRFIKCVTVGDGAVGKTCMLICYTCNKFP 36
>07_01_0926 -
7775536-7775616,7775695-7775787,7775903-7775965,
7776326-7776423,7776661-7776761,7776865-7776937,
7778575-7778647
Length = 193
Score = 53.6 bits (123), Expect = 8e-08
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +3
Query: 321 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGQIDVDGEEVEMALWDTAGQ 494
+K+ ++GD VGK+CLL ++ F ++ T+ D + I++DG+ +++ +WDTAGQ
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
>03_06_0475 +
34193951-34194023,34195414-34195486,34195572-34195672,
34195912-34196009,34196326-34196388,34196534-34196626,
34196697-34196774
Length = 192
Score = 53.2 bits (122), Expect = 1e-07
Identities = 20/59 (33%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +3
Query: 321 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGQIDVDGEEVEMALWDTAGQ 494
+K+ ++GD VGK+CLL ++ F ++ T+ D + +++DG+ +++ +WDTAGQ
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
>01_05_0340 -
21139885-21139978,21140169-21140272,21140379-21140534,
21140622-21140693,21140782-21140829,21140923-21140970,
21141807-21141879,21142333-21142346
Length = 202
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGQIDVDGEEVEMALWDTAGQ 494
K+ ++GD VGK+CLL + + + E Y+ T+ D + ++ DG+ +++ +WDTAGQ
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
>08_02_1318 -
26111031-26111276,26112139-26112427,26112936-26113036,
26113628-26113878,26114842-26114865,26115793-26116129
Length = 415
Score = 51.2 bits (117), Expect = 4e-07
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQ-IDVDGEEVEMALWDTAGQ 494
K+ ++GD VGK+ LL Y RNEF T+ + Q +D++G++V+ +WDTAGQ
Sbjct: 15 KVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTAGQ 72
>02_05_0161 +
26384079-26384086,26386173-26386226,26386376-26386448,
26386775-26386822,26386906-26386953,26387990-26388061,
26388156-26388311,26388428-26388531,26388628-26388724
Length = 219
Score = 51.2 bits (117), Expect = 4e-07
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGQIDVDGEEVEMALWDTAGQ 494
K+ ++GD VGK+CLL + + + + Y+ T+ D + ++ DG+ +++ +WDTAGQ
Sbjct: 26 KLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 83
>01_01_0565 -
4159946-4160042,4160140-4160243,4160378-4160533,
4160629-4160700,4161796-4161843,4161923-4161970,
4162295-4162367,4163188-4163201
Length = 203
Score = 51.2 bits (117), Expect = 4e-07
Identities = 20/58 (34%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGQIDVDGEEVEMALWDTAGQ 494
K+ ++GD VGK+CLL + + + + Y+ T+ D + ++ DG+ +++ +WDTAGQ
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
>06_03_0414 - 20548577-20549006,20553521-20553744
Length = 217
Score = 50.4 bits (115), Expect = 8e-07
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQ-IDVDGEEVEMALWDTAGQ 494
K+ ++GD VGK+ LL +TRNEF E T+ + + + VDG+ V+ +WDTAGQ
Sbjct: 16 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
>05_06_0082 - 25425050-25425479,25426551-25426783
Length = 220
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQ-IDVDGEEVEMALWDTAGQ 494
K+ ++GD VGK+ LL +T+NEF E T+ + + + VDG+ ++ +WDTAGQ
Sbjct: 19 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQ 76
>10_03_0038 -
7297210-7297248,7297361-7297429,7297524-7297731,
7297829-7297911,7298859-7298998,7299132-7299183
Length = 196
Score = 48.4 bits (110), Expect = 3e-06
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +3
Query: 318 RLKITVVGDGMVGKTCLLYVYTRNEFPE-EYVPTVFDNYVGQIDVDGEEVEMALWDTAGQ 494
R K +GD VGK+CLL +T F E E + T + + VDG+ ++ +WDTAGQ
Sbjct: 8 RFKFVTIGDAGVGKSCLLLQFTDKRFREVEDLTTGVEYGACVVAVDGKNTKLQIWDTAGQ 67
>07_03_1397 +
26269186-26269525,26269727-26269932,26270225-26270327,
26270570-26270577
Length = 218
Score = 48.4 bits (110), Expect = 3e-06
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQ-IDVDGEEVEMALWDTAGQ 494
KI ++GD VGK+ LL + RNEF T+ + Q + +DG+E++ +WDTAGQ
Sbjct: 16 KIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTAGQ 73
>05_07_0127 - 27872803-27873238,27873842-27874059
Length = 217
Score = 48.0 bits (109), Expect = 4e-06
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQ-IDVDGEEVEMALWDTAGQ 494
K+ ++GD VGK+ LL +TRNEF E T+ + + I VD + V+ +WDTAGQ
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
>05_03_0590 -
15884485-15884489,15884702-15884790,15885086-15885251,
15885333-15885393,15886256-15886392,15887936-15888002
Length = 174
Score = 48.0 bits (109), Expect = 4e-06
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYV-GQIDVDGEEVEMALWDTAGQ 494
K+ ++GDG VGKT L+ Y + F ++ TV +Y+ ++ V+G + +++WDTAGQ
Sbjct: 16 KLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIWDTAGQ 73
>09_02_0464 - 9591139-9591571,9592601-9592818
Length = 216
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQ-IDVDGEEVEMALWDTAGQ 494
K+ ++GD VGK+ LL +TRNEF E T+ + + I VD + V+ +WDTAGQ
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQ 71
>01_06_0712 + 31397167-31397402,31399823-31400252
Length = 221
Score = 47.6 bits (108), Expect = 5e-06
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQ-IDVDGEEVEMALWDTAGQ 494
K ++GD VGK+ LL +T+NEF E T+ + + I VDG+ V+ +WDTAGQ
Sbjct: 20 KTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQIWDTAGQ 77
>01_01_0893 +
7043130-7043182,7043309-7043335,7043461-7043560,
7045110-7045256,7045342-7045422,7045509-7045654,
7046030-7046099
Length = 207
Score = 47.2 bits (107), Expect = 7e-06
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 321 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGQIDVDGEEVEMALWDTAGQ 494
LK+ ++GD VGKT L+ Y +F +Y T+ D ++ +D + +WDTAGQ
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 67
>05_01_0036 + 253734-253904,255216-255707
Length = 220
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/58 (39%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQ-IDVDGEEVEMALWDTAGQ 494
K+ ++GD VGK+ LL +TRNEF E T+ + + + V+G+ ++ +WDTAGQ
Sbjct: 16 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQ 73
>01_06_1343 - 36461476-36461961,36463355-36463519
Length = 216
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQ-IDVDGEEVEMALWDTAGQ 494
KI ++GD VGK+ +L +TRNEF E T+ + + + ++G+ ++ +WDTAGQ
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQIWDTAGQ 71
>06_03_1387 - 29820358-29821035
Length = 225
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGQIDVDGEEVEMALWDTAGQ 494
K+ V+GD VGKT LL +T++EF + T+ + +++ G+ V+ +WDTAGQ
Sbjct: 9 KVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIWDTAGQ 66
>11_03_0182 +
11307275-11307368,11307485-11307594,11307654-11307856,
11307879-11307964,11308861-11308934,11308936-11309078,
11309485-11309594,11309645-11309787
Length = 320
Score = 45.2 bits (102), Expect = 3e-05
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +3
Query: 402 EYVPTVFDNYVGQIDVDGEEVEMALWDTAGQ 494
+Y+PTVFDN+ + VDG + + LW TAGQ
Sbjct: 3 DYIPTVFDNFSANVSVDGNIINLGLWGTAGQ 33
>05_05_0118 -
22504483-22504566,22504650-22504742,22504852-22504914,
22505048-22505145,22505378-22505478,22505581-22505653,
22505872-22505910,22506946-22507018
Length = 207
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Frame = +3
Query: 351 VGKTCLLYVYTRNEFPEEYVPTV-FDNYVGQIDVDGEEVEMALWDTAGQ 494
VGK+CLL ++ F ++ T+ D + I++DG+ +++ +WDTAGQ
Sbjct: 39 VGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 87
>03_01_0365 -
2839190-2839251,2839637-2839694,2839946-2840032,
2840117-2840206,2840575-2840650,2840877-2840971,
2841090-2841173,2841270-2841343,2841803-2841827
Length = 216
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +3
Query: 276 NLSDVAARTMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQIDV-- 449
N+S+ + T R K+ ++GD VGK+C++ + R +F TV +++ Q
Sbjct: 17 NISNDNSATDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALE 76
Query: 450 DGEEVEMALWDTAGQ 494
D V+ +WDTAGQ
Sbjct: 77 DSTIVKFEIWDTAGQ 91
>03_01_0326 +
2535800-2535938,2536891-2536959,2537310-2537375,
2537979-2538100,2538501-2538629,2540462-2540569
Length = 210
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/59 (35%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVY-TRNEFPEEYVPTV-FDNYVGQIDVDGEEVEMALWDTAGQ 494
KI ++GD VGK+ LL + + + +E PT+ D + + V+G+++++ +WDTAGQ
Sbjct: 14 KILLIGDSAVGKSSLLVSFVSASHIDDEIAPTIGVDFKIKFLTVNGKKLKLTIWDTAGQ 72
>04_04_0191 +
23468410-23468455,23468560-23468699,23469119-23469201,
23469346-23469550,23469632-23469735,23470290-23470449
Length = 245
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNY-VGQIDVDGEEVEMALWDTAGQ 494
K ++GD VGK+CLL +T F + T+ + I VD V++ +WDTAGQ
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITVDSRPVKLQIWDTAGQ 65
>10_08_0165 +
15356748-15356811,15357113-15357186,15357311-15357394,
15357508-15357602,15357737-15357790,15357791-15357896,
15358236-15358277,15358585-15358674,15358788-15358984,
15359355-15359413,15360166-15362252
Length = 983
Score = 43.6 bits (98), Expect = 9e-05
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +3
Query: 318 RLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQIDV--DGEEVEMALWDTAG 491
R+K+ ++GD VGK+C++ + R +F TV +++ Q D V+ +WDTAG
Sbjct: 44 RVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKFEIWDTAG 103
Query: 492 Q 494
Q
Sbjct: 104 Q 104
>09_02_0222 +
5968232-5968467,5970811-5971187,5972216-5972256,
5972808-5972843
Length = 229
Score = 43.6 bits (98), Expect = 9e-05
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGQIDVDGEEVEMALWDTAGQ 494
K+ ++GD VGK+ LL + RNEF + T+ + + +D V+ +WDTAGQ
Sbjct: 20 KVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQ 77
>02_04_0402 +
22618998-22619043,22619206-22619345,22620067-22620149,
22620234-22620438,22620524-22620592,22621099-22621188
Length = 210
Score = 43.6 bits (98), Expect = 9e-05
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNY-VGQIDVDGEEVEMALWDTAGQ 494
K ++GD VGK+CLL +T F + T+ + I +D + +++ +WDTAGQ
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQ 65
>05_03_0286 - 11623575-11624063,11625098-11625262
Length = 217
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQ-IDVDGEEVEMALWDTAGQ 494
K+ ++GD VGK+ +L +TRN F + T+ + + + ++G+ ++ +WDTAGQ
Sbjct: 14 KMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQ 71
>01_06_0186 + 27294973-27295211,27295610-27296045
Length = 224
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQ-IDVDGEEVEMALWDTAGQ 494
K+ ++GD VGK+ LL + R+EF E T+ + + + VD V+ +WDTAGQ
Sbjct: 21 KVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKAQIWDTAGQ 78
>09_06_0029 + 20336634-20336881,20337737-20338208
Length = 239
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGQIDVDGEEVEMALWDTAGQ 494
K+ VVGD VGKT LL +T++EF + T+ + + + + V+ +WDTAGQ
Sbjct: 24 KVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWDTAGQ 81
>03_05_0601 +
26039326-26039367,26039958-26040035,26040136-26040303,
26040994-26041042,26041502-26041575,26041940-26041948
Length = 139
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +3
Query: 288 VAARTMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQ-IDVDGEEV 464
+AA + K+ ++GD GK+ L+ + + +F E T+ + Q + V+ E V
Sbjct: 1 MAANAGNKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETV 60
Query: 465 EMALWDTAGQ 494
+ +WDTAGQ
Sbjct: 61 KFEIWDTAGQ 70
>12_02_1213 +
27058329-27058370,27058634-27058711,27058807-27058974,
27059834-27059882,27060084-27060157,27060692-27060785,
27060924-27061003,27061311-27061322
Length = 198
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +3
Query: 288 VAARTMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQ-IDVDGEEV 464
+AA + K+ ++GD GK+ L+ + + +F E T+ + Q + V+ E V
Sbjct: 1 MAANPGNKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETV 60
Query: 465 EMALWDTAGQ 494
+ +WDTAGQ
Sbjct: 61 KFEIWDTAGQ 70
>05_07_0205 -
28402436-28402505,28402604-28402681,28402789-28402968,
28403051-28403140,28403258-28403375,28403461-28403517,
28404155-28404224,28404317-28404319
Length = 221
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGQIDVDGEEVEMALWDTAGQ 494
K+ +VGDG GKT + + EF ++Y PT+ + + + ++ WDTAGQ
Sbjct: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQ 72
>07_03_0473 -
18525712-18525858,18526049-18526162,18526442-18526522,
18526787-18526865,18526902-18526996,18527092-18527170,
18527339-18527450,18527682-18527770,18527868-18527938,
18528846-18528962
Length = 327
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 318 RLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQ-IDVDGEEVEMALWDTAGQ 494
+ K+ +GD VGKT ++ + ++F Y T+ +++ + + ++ V + LWDTAGQ
Sbjct: 9 KYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 68
>03_06_0501 -
34380155-34380637,34380961-34381029,34382206-34382229,
34382622-34382786
Length = 246
Score = 31.5 bits (68), Expect(2) = 0.002
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV 419
KI ++GD VGK+ +L +TRNEF E T+
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTI 45
Score = 26.6 bits (56), Expect(2) = 0.002
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +3
Query: 435 GQIDVDGEEVEMALWDTAGQ 494
G+ ++G+ ++ +WDTAGQ
Sbjct: 83 GRKGIEGQTIKAQIWDTAGQ 102
>01_05_0673 +
24183512-24183514,24183625-24183694,24184203-24184259,
24184348-24184465,24185044-24185133,24185209-24185388,
24185474-24185551,24185642-24185711
Length = 221
Score = 38.7 bits (86), Expect = 0.003
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV-FDNYVGQIDVDGEEVEMALWDTAGQ 494
K+ +VGDG GKT + + EF ++Y PT+ + + + ++ WDTAGQ
Sbjct: 15 KLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQ 72
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQID--VDGEEVEMALWDTAGQ 494
K+ +VGDG GKT + + EF + Y PT+ V +D +V WDTAGQ
Sbjct: 443 KLILVGDGGTGKTTFVKRHITGEFEKRYEPTI-GVEVRPLDFHTSRGKVRFCCWDTAGQ 500
>10_08_0250 -
16179646-16179759,16180197-16180325,16180519-16180640,
16181073-16181138,16182202-16182270,16182989-16183157
Length = 222
Score = 37.1 bits (82), Expect = 0.008
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYT----RNEFPEEYVPTV-FDNYVGQIDVDGEEVEMALWDTA 488
KI ++GD VGK+ LL + ++ PT+ D + + + G+++++ +WDTA
Sbjct: 21 KILLIGDSGVGKSSLLVSFVVAAAAAHLDDDIAPTIGVDFKIKFLTIGGKKLKLTIWDTA 80
Query: 489 GQ 494
GQ
Sbjct: 81 GQ 82
>05_01_0037 -
256891-256998,257347-257502,257753-257824,258737-258784,
259071-259143,259237-259250
Length = 156
Score = 36.3 bits (80), Expect = 0.014
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQIDVDGEEVEMALWDTAGQ 494
K+ ++GD VGK+CLL + + + I++DG+ V++ +WDTAGQ
Sbjct: 10 KLLLIGDSSVGKSCLLLRFAK---------------IRTIELDGKTVKLQIWDTAGQ 51
>03_02_0046 -
5255513-5255630,5255715-5255876,5256579-5256733,
5256811-5256892,5257790-5257827
Length = 184
Score = 33.5 bits (73), Expect = 0.095
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +3
Query: 297 RTMGTTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQIDVDGEEVEMAL 476
R++ + ++++++G GKT L+ V F E+ +PTV N V V + L
Sbjct: 12 RSLFFKQEMELSLIGLQNAGKTSLVNVIATGGFSEDMIPTVGFN---MRKVTKGNVTIKL 68
Query: 477 WDTAGQ 494
WD GQ
Sbjct: 69 WDLGGQ 74
>07_03_0638 +
20196216-20196650,20196810-20196930,20197072-20197168,
20197284-20197323,20197648-20197731,20198966-20199130
Length = 313
Score = 32.3 bits (70), Expect = 0.22
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 321 LKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQ-IDVDGEEVEMALWDTAG 491
LK++++GD +GKT + Y ++ + + N + + + V G + ++WD AG
Sbjct: 129 LKVSLLGDCQIGKTSFMVKYVGDDEEQNGLQMTGLNLMDKTLAVRGARIAFSIWDVAG 186
>07_01_0685 -
5177340-5177363,5177770-5177865,5177991-5178053,
5178138-5178232,5178941-5179028,5179372-5179444,
5179866-5179920,5180355-5180463
Length = 200
Score = 30.3 bits (65), Expect = 0.89
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +3
Query: 432 VGQIDVDGEEVEMALWDTAGQ 494
V +++DG+ V++ +WDTAGQ
Sbjct: 80 VRTVELDGKRVKLQIWDTAGQ 100
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 30.3 bits (65), Expect = 0.89
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 312 TKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQIDVDGEEVEMALWDTAG 491
TK +K+ ++G GKT +LY E +PT+ N V+ + V +WD G
Sbjct: 14 TKEMKVLMLGLDAAGKTTILYRLHIGEVLSS-IPTIGFNVE---KVEYKNVAFTVWDVGG 69
Query: 492 Q 494
Q
Sbjct: 70 Q 70
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 315 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQIDVDGEEVEMALWDTAGQ 494
K ++I +VG GKT +LY E +PT+ N V+ + + +WD GQ
Sbjct: 139 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQ 194
>05_06_0217 +
26457847-26457902,26458336-26458435,26458551-26458697,
26459040-26459120,26459251-26459396,26459509-26459572
Length = 197
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 378 YTRNEFPEEYVPTVFDNYVG-QIDVDGEEVEMALWDTAGQ 494
Y +F ++Y T+ ++V ++ ++ V + +WDTAGQ
Sbjct: 20 YVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQ 59
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 315 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQIDVDGEEVEMALWDTAGQ 494
K ++I +VG GKT +LY E +PT+ N V+ + + +WD GQ
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQ 71
>03_06_0637 - 35219212-35219754,35220405-35220587
Length = 241
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 19/76 (25%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQI-------------------D 446
KI ++GD VGK+ LL +TRN F + T+ + +
Sbjct: 20 KIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQYYCFPKGPLLNCFNFVTQ 79
Query: 447 VDGEEVEMALWDTAGQ 494
V+G+ V+ +WDTAGQ
Sbjct: 80 VEGKIVKAQIWDTAGQ 95
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 315 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQIDVDGEEVEMALWDTAGQ 494
K ++I +VG GKT +LY E +PT+ N V+ + + +WD GQ
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQ 71
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 315 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQIDVDGEEVEMALWDTAGQ 494
K ++I +VG GKT +LY E +PT+ N V+ + + +WD GQ
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQ 71
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 315 KRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQIDVDGEEVEMALWDTAGQ 494
K ++I +VG GKT +LY E +PT+ N V+ + + +WD GQ
Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVE---TVEYKNISFTVWDVGGQ 71
>10_06_0181 - 11532765-11533203,11536867-11537036
Length = 202
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 324 KITVVGDGMVGKTCLLYVYTRNEFPEEYVPTV 419
K+ ++GD VGK+ +L + RNEF + T+
Sbjct: 12 KVVLIGDSAVGKSQILARFARNEFSIDSKATI 43
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 309 TTKRLKITVVGDGMVGKTCLLYVYTRNEFPEEYVPTVFDNYVGQIDVDGEEVEMALWDTA 488
+T+ +++ ++G GKT +LY E VPTV N V + V +WD
Sbjct: 14 STREMRVVMLGLDAAGKTTILYRLHMGEVLST-VPTVGFNVE---KVQYKNVVFTVWDVG 69
Query: 489 GQ 494
GQ
Sbjct: 70 GQ 71
>09_03_0056 - 11936264-11939677
Length = 1137
Score = 27.9 bits (59), Expect = 4.7
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 243 FIVSYCEFVCVNLSDVAARTMGTTKRLKI-TVVGDGMVGKTCLLY 374
FI+ +S+V + K L + T+VGDG +GKT L +
Sbjct: 308 FILDKNSLTSEQVSEVPSSGRAGQKNLSVLTIVGDGGIGKTALAH 352
>01_05_0537 -
23019590-23020126,23020841-23021022,23021141-23021377,
23021460-23021567,23022107-23022257
Length = 404
Score = 27.9 bits (59), Expect = 4.7
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Frame = -1
Query: 494 LPCCIPQGHFYFLAIYVDLTDVIVEYSGNILLGKLIPSVYVE-------QAGLSDHTITD 336
LP C P Y + + D+ V+ G + K + S YVE + ++D
Sbjct: 231 LPLCSPCRGMYVVEYALFEVDLWVKMEGGVSNDKQLVSAYVEIFARGVFNKEIRGRILSD 290
Query: 335 HCYL 324
HCYL
Sbjct: 291 HCYL 294
>10_05_0108 - 9247498-9247854
Length = 118
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -2
Query: 367 RQVFPTIPSPTTVIFSLF 314
R+ PTIP+ TTVI SLF
Sbjct: 73 RRAMPTIPTTTTVIGSLF 90
>08_02_0648 - 19694538-19696569,19697151-19697998
Length = 959
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 300 TMGTTKRLKITVVGDGMVGKTCL---LYVYTRNEF 395
T T KR I++VG G +GKT L +Y R+ F
Sbjct: 180 TSDTNKRRVISIVGSGGIGKTTLANQVYQKVRSRF 214
>08_02_0627 +
19449196-19449651,19449723-19449861,19450260-19450381,
19450685-19450888,19450981-19451040,19451628-19451820,
19451880-19451998,19452189-19452413,19452534-19452728
Length = 570
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 321 LKITVVGDGMVGKTCLLYVYTRNE--FPEEYVPTVFDNYVGQIDVDGEEVEMALWDTAG 491
L++ ++G VGK+ LL ++++E E T D + + G + + L DTAG
Sbjct: 306 LQVAIIGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDVVEANVSIHG--IPITLLDTAG 362
>05_04_0033 - 17369134-17369321,17369522-17370355,17370429-17373042
Length = 1211
Score = 27.1 bits (57), Expect = 8.3
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 297 RTMGTTKRLKITVVGDGMVGKTCLL-YVYTRNEFPEEYVPTVFDNYVGQIDV 449
+T R +++VG G +GK+ L YVY E + T++ ++DV
Sbjct: 206 KTCAEASRFVVSIVGPGGMGKSTLAQYVYNDKTIQEHFDVTMWVCISRKLDV 257
>04_03_0596 - 17775203-17775247,17775772-17775830,17776093-17776609
Length = 206
Score = 27.1 bits (57), Expect = 8.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 361 PACSTYTLGMSFPRSMFPLYSTI 429
P Y ++P S FPLY+T+
Sbjct: 110 PGVDVYNYTWTYPESFFPLYATV 132
>03_05_0406 + 23895593-23896141
Length = 182
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 384 RNEFPEEYVPTVFDNYVGQID 446
+++ PEE P F+N+ GQID
Sbjct: 87 KDDKPEEETPLEFENFQGQID 107
>01_06_1448 -
37434159-37434242,37434875-37434968,37435077-37435250,
37435536-37435627,37435947-37436056,37437274-37437349,
37437445-37437537,37437617-37437817
Length = 307
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 479 PQGHFYFLAIYVDLTDVIVEYSGNILL 399
P H + L + +T+VIV+ SGN+L+
Sbjct: 120 PHSHGFKLGVEKHVTEVIVKKSGNLLI 146
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,681,400
Number of Sequences: 37544
Number of extensions: 247130
Number of successful extensions: 761
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1035514020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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