BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_H20
(316 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071319-1|AAL48941.1| 167|Drosophila melanogaster RE34144p pro... 64 5e-11
AE014298-2427|AAF48626.1| 167|Drosophila melanogaster CG4443-PA... 64 5e-11
AJ277746-1|CAB90824.1| 200|Drosophila melanogaster ubiquitin co... 51 4e-07
AY071574-1|AAL49196.1| 168|Drosophila melanogaster RE63412p pro... 42 1e-04
AE014296-3785|EAA46069.1| 168|Drosophila melanogaster CG40045-P... 42 1e-04
BT001441-1|AAN71196.1| 180|Drosophila melanogaster GH25305p pro... 41 3e-04
AE014297-1752|AAF54982.1| 168|Drosophila melanogaster CG9602-PA... 41 3e-04
BT028772-1|ABI34153.1| 178|Drosophila melanogaster IP01717p pro... 28 2.9
AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein ... 28 2.9
AF410850-1|AAL02117.1| 178|Drosophila melanogaster E2-C type ub... 28 2.9
AE014296-2152|AAF49909.1| 178|Drosophila melanogaster CG10682-P... 28 2.9
BT015283-1|AAT94512.1| 341|Drosophila melanogaster GH23746p pro... 27 3.8
BT011473-1|AAR99131.1| 319|Drosophila melanogaster RE15288p pro... 27 3.8
AE014296-2542|AAF49611.1| 341|Drosophila melanogaster CG7656-PC... 27 3.8
AY069476-1|AAL39621.1| 218|Drosophila melanogaster LD21589p pro... 27 5.0
BT010246-1|AAQ23564.1| 583|Drosophila melanogaster RE42568p pro... 27 6.7
AY069701-1|AAL39846.1| 541|Drosophila melanogaster LD47413p pro... 27 6.7
AY051915-1|AAK93339.1| 270|Drosophila melanogaster LD40324p pro... 27 6.7
AE014297-4251|AAF56804.2| 668|Drosophila melanogaster CG9988-PA... 27 6.7
AE014296-2544|AAN11776.1| 317|Drosophila melanogaster CG7656-PA... 27 6.7
AE014296-2543|AAN11777.2| 269|Drosophila melanogaster CG7656-PB... 27 6.7
AE014296-1884|AAN11895.1| 541|Drosophila melanogaster CG32075-P... 27 6.7
>AY071319-1|AAL48941.1| 167|Drosophila melanogaster RE34144p
protein.
Length = 167
Score = 63.7 bits (148), Expect = 5e-11
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +3
Query: 3 EPNDESGANVDAAKMWREDRAQFNRIAQTLVKKTLGL 113
EPNDESGANVDAA MWRE R +FN IA+ LV+KTLGL
Sbjct: 129 EPNDESGANVDAAIMWREQRDEFNAIARRLVRKTLGL 165
>AE014298-2427|AAF48626.1| 167|Drosophila melanogaster CG4443-PA
protein.
Length = 167
Score = 63.7 bits (148), Expect = 5e-11
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +3
Query: 3 EPNDESGANVDAAKMWREDRAQFNRIAQTLVKKTLGL 113
EPNDESGANVDAA MWRE R +FN IA+ LV+KTLGL
Sbjct: 129 EPNDESGANVDAAIMWREQRDEFNAIARRLVRKTLGL 165
>AJ277746-1|CAB90824.1| 200|Drosophila melanogaster ubiquitin
conjugating enzyme protein.
Length = 200
Score = 50.8 bits (116), Expect = 4e-07
Identities = 24/35 (68%), Positives = 25/35 (71%)
Frame = +3
Query: 3 EPNDESGANVDAAKMWREDRAQFNRIAQTLVKKTL 107
EPNDESGANVDAA MWRE R +FN IA K L
Sbjct: 129 EPNDESGANVDAAIMWREQRDEFNAIADGWCAKLL 163
>AY071574-1|AAL49196.1| 168|Drosophila melanogaster RE63412p
protein.
Length = 168
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +3
Query: 3 EPNDESGANVDAAKMWREDRAQFNRIAQTLVKKT 104
+PNDES ANVDAAK WRE F R V+K+
Sbjct: 130 DPNDESPANVDAAKEWRESYTDFKRKVARCVRKS 163
>AE014296-3785|EAA46069.1| 168|Drosophila melanogaster CG40045-PA
protein.
Length = 168
Score = 42.3 bits (95), Expect = 1e-04
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +3
Query: 3 EPNDESGANVDAAKMWREDRAQFNRIAQTLVKKT 104
+PNDES ANVDAAK WRE F R V+K+
Sbjct: 130 DPNDESPANVDAAKEWRESYTDFKRKVARCVRKS 163
>BT001441-1|AAN71196.1| 180|Drosophila melanogaster GH25305p
protein.
Length = 180
Score = 41.1 bits (92), Expect = 3e-04
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 3 EPNDESGANVDAAKMWREDRAQFNRIAQTLVKKT 104
+PNDES ANVDAAK +RE+ A+F R V+++
Sbjct: 142 DPNDESAANVDAAKEYRENYAEFKRKVTRCVRRS 175
>AE014297-1752|AAF54982.1| 168|Drosophila melanogaster CG9602-PA
protein.
Length = 168
Score = 41.1 bits (92), Expect = 3e-04
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +3
Query: 3 EPNDESGANVDAAKMWREDRAQFNRIAQTLVKKT 104
+PNDES ANVDAAK +RE+ A+F R V+++
Sbjct: 130 DPNDESAANVDAAKEYRENYAEFKRKVTRCVRRS 163
>BT028772-1|ABI34153.1| 178|Drosophila melanogaster IP01717p
protein.
Length = 178
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 3 EPNDESGANVDAAKMWREDRAQFNRIAQTLVKK 101
EPN+ES N AA MW D+ ++ + +K
Sbjct: 143 EPNNESPLNAQAAMMW-NDQKEYKKYLDAFYEK 174
>AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein
protein.
Length = 1571
Score = 27.9 bits (59), Expect = 2.9
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = -3
Query: 164 YLVNRERLKRDELLRCFQTEGFLDEGLRDPIELRAVLPPH 45
+L N +RLK+DE L+ + + + E L D +R VLP H
Sbjct: 743 FLKNEQRLKKDEALKA-RYDSVIQEYL-DLKHMRQVLPTH 780
>AF410850-1|AAL02117.1| 178|Drosophila melanogaster E2-C type
ubiquitin conjugatingenzyme protein.
Length = 178
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 3 EPNDESGANVDAAKMWREDRAQFNRIAQTLVKK 101
EPN+ES N AA MW D+ ++ + +K
Sbjct: 143 EPNNESPLNAQAAMMW-NDQKEYKKYLDAFYEK 174
>AE014296-2152|AAF49909.1| 178|Drosophila melanogaster CG10682-PA
protein.
Length = 178
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 3 EPNDESGANVDAAKMWREDRAQFNRIAQTLVKK 101
EPN+ES N AA MW D+ ++ + +K
Sbjct: 143 EPNNESPLNAQAAMMW-NDQKEYKKYLDAFYEK 174
>BT015283-1|AAT94512.1| 341|Drosophila melanogaster GH23746p
protein.
Length = 341
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +3
Query: 3 EPNDESGANVDAAKM---WREDRAQFNRIAQTLVKKTL 107
EPN S ANVDA+ M WR+ + + N + K+ L
Sbjct: 187 EPNTFSPANVDASVMYRRWRDSQGKDNEYPNIIRKQAL 224
>BT011473-1|AAR99131.1| 319|Drosophila melanogaster RE15288p
protein.
Length = 319
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +3
Query: 3 EPNDESGANVDAAKM---WREDRAQFNRIAQTLVKKTL 107
EPN S ANVDA+ M WR+ + + N + K+ L
Sbjct: 165 EPNTFSPANVDASVMYRRWRDSQGKDNEYPNIIRKQAL 202
>AE014296-2542|AAF49611.1| 341|Drosophila melanogaster CG7656-PC,
isoform C protein.
Length = 341
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +3
Query: 3 EPNDESGANVDAAKM---WREDRAQFNRIAQTLVKKTL 107
EPN S ANVDA+ M WR+ + + N + K+ L
Sbjct: 187 EPNTFSPANVDASVMYRRWRDSQGKDNEYPNIIRKQAL 224
>AY069476-1|AAL39621.1| 218|Drosophila melanogaster LD21589p
protein.
Length = 218
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 70 SIGSRKPSSRKPSVWKHLNSSSRFNLSRFT 159
S+ + P +RKPS +K N+ SRF + R +
Sbjct: 114 SVWLKNPETRKPSDFKLRNALSRFYVKRIS 143
>BT010246-1|AAQ23564.1| 583|Drosophila melanogaster RE42568p
protein.
Length = 583
Score = 26.6 bits (56), Expect = 6.7
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 79 SRKPSSRKPSVWKH-LNSSSRFNLSR 153
S KPS RKPSV ++S SR NL R
Sbjct: 119 SLKPSKRKPSVLMFGIDSLSRINLRR 144
>AY069701-1|AAL39846.1| 541|Drosophila melanogaster LD47413p
protein.
Length = 541
Score = 26.6 bits (56), Expect = 6.7
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +3
Query: 6 PNDESGANVDAAKMWREDRAQFNRIAQTLVK 98
P+ E+ +N+DA K+ R+D+ +F + L++
Sbjct: 186 PHMETMSNLDAGKLHRKDKLKFEKAVTDLLE 216
>AY051915-1|AAK93339.1| 270|Drosophila melanogaster LD40324p
protein.
Length = 270
Score = 26.6 bits (56), Expect = 6.7
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 3 EPNDESGANVDAAKMWREDR-AQFNRIAQTLVKKTL 107
EPN S ANVDA+ M+R R +Q N + K+ L
Sbjct: 118 EPNTFSPANVDASVMYRRWRDSQDNEYPNIIRKQAL 153
>AE014297-4251|AAF56804.2| 668|Drosophila melanogaster CG9988-PA
protein.
Length = 668
Score = 26.6 bits (56), Expect = 6.7
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 79 SRKPSSRKPSVWKH-LNSSSRFNLSR 153
S KPS RKPSV ++S SR NL R
Sbjct: 204 SLKPSKRKPSVLMFGIDSLSRINLRR 229
>AE014296-2544|AAN11776.1| 317|Drosophila melanogaster CG7656-PA,
isoform A protein.
Length = 317
Score = 26.6 bits (56), Expect = 6.7
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 3 EPNDESGANVDAAKMWREDR-AQFNRIAQTLVKKTL 107
EPN S ANVDA+ M+R R +Q N + K+ L
Sbjct: 165 EPNTFSPANVDASVMYRRWRDSQDNEYPNIIRKQAL 200
>AE014296-2543|AAN11777.2| 269|Drosophila melanogaster CG7656-PB,
isoform B protein.
Length = 269
Score = 26.6 bits (56), Expect = 6.7
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 3 EPNDESGANVDAAKMWREDR-AQFNRIAQTLVKKTL 107
EPN S ANVDA+ M+R R +Q N + K+ L
Sbjct: 117 EPNTFSPANVDASVMYRRWRDSQDNEYPNIIRKQAL 152
>AE014296-1884|AAN11895.1| 541|Drosophila melanogaster CG32075-PA
protein.
Length = 541
Score = 26.6 bits (56), Expect = 6.7
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +3
Query: 6 PNDESGANVDAAKMWREDRAQFNRIAQTLVK 98
P+ E+ +N+DA K+ R+D+ +F + L++
Sbjct: 186 PHMETMSNLDAGKLHRKDKLKFEKAVTDLLE 216
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,071,944
Number of Sequences: 53049
Number of extensions: 196144
Number of successful extensions: 451
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 631882260
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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