Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_H20
(316 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 64 2e-11
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 37 0.004
U23522-3|AAC46817.1| 432|Caenorhabditis elegans Hypothetical pr... 29 0.53
Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical pr... 27 2.8
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 27 2.8
AC006662-6|AAF39892.1| 274|Caenorhabditis elegans Hypothetical ... 27 2.8
U97403-5|AAO21397.1| 268|Caenorhabditis elegans Hypothetical pr... 27 3.8
U97403-4|AAB52474.2| 445|Caenorhabditis elegans Hypothetical pr... 27 3.8
AC084161-3|AAK29731.2| 249|Caenorhabditis elegans Hypothetical ... 27 3.8
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 25 8.7
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 25 8.7
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 64.1 bits (149), Expect = 2e-11
Identities = 30/40 (75%), Positives = 33/40 (82%)
Frame = +3
Query: 3 EPNDESGANVDAAKMWREDRAQFNRIAQTLVKKTLGLETS 122
EPNDES ANV AAKMWREDRAQF +IA +LV+KTL L S
Sbjct: 129 EPNDESPANVSAAKMWREDRAQFEKIADSLVRKTLCLPAS 168
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +3
Query: 3 EPNDESGANVDAAKMWREDRAQFNRIAQTLVKKT 104
+PN ES ANVDAAKM RE+ A+F + V+++
Sbjct: 128 DPNFESPANVDAAKMQRENYAEFKKKVAQCVRRS 161
>U23522-3|AAC46817.1| 432|Caenorhabditis elegans Hypothetical
protein W06B4.1 protein.
Length = 432
Score = 29.5 bits (63), Expect = 0.53
Identities = 11/31 (35%), Positives = 24/31 (77%)
Frame = -2
Query: 243 GVDAILKRNTGKINTK*MHLIRQLIILFSES 151
GV+A +++ TGK N + +IR++++LF+++
Sbjct: 107 GVEAAMRKATGKDNWREKGVIRRVVVLFAQT 137
>Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical
protein R09D1.4 protein.
Length = 410
Score = 27.1 bits (57), Expect = 2.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 92 EGLRDPIELRAVLPPHLGRVDVGAAL 15
EGLRDP+ L V+P ++ + G ++
Sbjct: 230 EGLRDPLTLSVVVPHYINHREAGYSI 255
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 3/23 (13%)
Frame = +3
Query: 3 EPNDESGANVDAAKM---WREDR 62
EPN S ANVDA+ M W+ED+
Sbjct: 134 EPNTSSPANVDASVMYRKWKEDQ 156
>AC006662-6|AAF39892.1| 274|Caenorhabditis elegans Hypothetical
protein H23L24.1 protein.
Length = 274
Score = 27.1 bits (57), Expect = 2.8
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +3
Query: 192 FILYLFYLCSFLKWRRL 242
+ +YLF LCSFLK++++
Sbjct: 41 YCVYLFQLCSFLKFQKI 57
>U97403-5|AAO21397.1| 268|Caenorhabditis elegans Hypothetical
protein T10E9.7b protein.
Length = 268
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 76 GSRKPSSRKPSVWKHLNSSSRFNLSRFTK 162
G +K S +KP++WK ++ R L+ F K
Sbjct: 33 GDKKESPKKPTIWK-IDEHKRERLANFGK 60
>U97403-4|AAB52474.2| 445|Caenorhabditis elegans Hypothetical
protein T10E9.7a protein.
Length = 445
Score = 26.6 bits (56), Expect = 3.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 76 GSRKPSSRKPSVWKHLNSSSRFNLSRFTK 162
G +K S +KP++WK ++ R L+ F K
Sbjct: 210 GDKKESPKKPTIWK-IDEHKRERLANFGK 237
>AC084161-3|AAK29731.2| 249|Caenorhabditis elegans Hypothetical
protein Y92H12A.3 protein.
Length = 249
Score = 26.6 bits (56), Expect = 3.8
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +3
Query: 6 PNDESGANVDAAKMWREDRAQFNRIAQ---TLVKKTLG 110
PN + +DA K+ ED Q ++A+ L+KK LG
Sbjct: 73 PNKDDTFTIDAMKVLIEDSEQCQKVAEIVAQLIKKLLG 110
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 25.4 bits (53), Expect = 8.7
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 27 NVDAAKMWREDRAQFNRIAQTLVKK 101
N+ AA+MW ++R FN + + +
Sbjct: 154 NIQAAQMWSQNRESFNHRVREYISR 178
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 165 ILLIDELNAFILYLFYLCSFLKWR 236
+LL ++ ++ LCSFLKWR
Sbjct: 102 LLLAFCVSKLFFWILSLCSFLKWR 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,290,769
Number of Sequences: 27780
Number of extensions: 107476
Number of successful extensions: 286
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 286
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 355337994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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