Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_H17
(618 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.0
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 1.4
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 1.8
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 23 1.8
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 23 3.2
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.2
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.2
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 5.5
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 21 7.3
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 7.3
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 21 9.6
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.2 bits (50), Expect = 1.0
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 26 SHKLNSRNDHIHNGEGTATENRRAPPPP 109
SH H++ NRR PPPP
Sbjct: 1678 SHSTWDPRRHMYEELNHCAPNRRCPPPP 1705
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.8 bits (49), Expect = 1.4
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 466 TLRHECISNNH*FD*NKIFINYRIYLQSNTDLYQRLLF 579
+L ++ I NN+ ++ N NY Y +N + Y++L +
Sbjct: 317 SLSNKTIHNNNNYNNNNYNNNYNNYNNNNYNNYKKLYY 354
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = -1
Query: 498 VIVANTLMPKSIEAYIT*ALTYPCLFLCTPTTSNIVNI 385
V + NTL+ +S++ +T P + + +PT + I
Sbjct: 252 VPIINTLLERSVDLVVTSTYCEPQVVIVSPTRELTIQI 289
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 536 FIFNLIQTCISGYYLSVINLY 598
+ NLI C+S YLSV+ Y
Sbjct: 238 YTVNLIVPCVSISYLSVLAFY 258
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 22.6 bits (46), Expect = 3.2
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 PPRIGVHRHRLMYLLRRSLSTWLQAASITTPTHAVVFSL*KRDA*SSVII-TWCQLFVYS 254
P +G+HR +L S A TPT+AVV S V++ +C+L+ Y+
Sbjct: 160 PISLGLHRANEPVVLDDSKEEHPTCALDLTPTYAVVSSSISFYVPCIVMLGIYCRLYCYA 219
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/15 (46%), Positives = 14/15 (93%)
Frame = -1
Query: 567 LIQVCIRLKINPIID 523
+++VCI+LK++ +ID
Sbjct: 53 VLRVCIKLKLSQLID 67
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/15 (46%), Positives = 14/15 (93%)
Frame = -1
Query: 567 LIQVCIRLKINPIID 523
+++VCI+LK++ +ID
Sbjct: 53 VLRVCIKLKLSQLID 67
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.8 bits (44), Expect = 5.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 45 GTTIYTMEKEPPPRIGVHRHRLMYLLRRSLSTWLQAASIT 164
GTT T E++P P V H + L + + +Q S T
Sbjct: 110 GTTNLTFEEDPEPFGRVRDHNISALCKELGISVVQKVSHT 149
Score = 21.4 bits (43), Expect = 7.3
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -2
Query: 86 SRWRFLLHCV 57
++WRFLL C+
Sbjct: 68 NKWRFLLQCL 77
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -3
Query: 97 CTPILGGGSFSIVY 56
C LG G F IVY
Sbjct: 69 CGTFLGSGGFGIVY 82
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 7.3
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = +2
Query: 74 TATENRRAPPPPYVSVEAQPVNVVTSSKYYDSYTCC 181
+A + + P P SV + P V + KY CC
Sbjct: 571 SAIQFKLGHPEPPESVCSLPCEVGQAKKYVAGEQCC 606
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 344 IFCSILMIFLALHLIFT 394
I C I ++FLAL+ T
Sbjct: 7 ILCGIAVLFLALYYYLT 23
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,548
Number of Sequences: 438
Number of extensions: 3947
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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