Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_H14
         (289 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U59431-1|AAB19187.1|  290|Homo sapiens truncated pancreatic poly...    28   4.8  
D86519-1|BAA13103.1|  290|Homo sapiens Y6 encoding protein protein.    28   4.8  
U79526-1|AAC51258.1|  373|Homo sapiens orphan G-protein coupled ...    28   6.3  

>U59431-1|AAB19187.1|  290|Homo sapiens truncated pancreatic
           polypeptide receptor PP2 protein.
          Length = 290

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 9/21 (42%), Positives = 17/21 (80%)
 Frame = +1

Query: 4   VFVVQYFIPILMIILCYKREV 66
           +F++QYF+P+  I++CY + V
Sbjct: 213 LFLLQYFVPLGFILICYLKIV 233


>D86519-1|BAA13103.1|  290|Homo sapiens Y6 encoding protein protein.
          Length = 290

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 9/21 (42%), Positives = 17/21 (80%)
 Frame = +1

Query: 4   VFVVQYFIPILMIILCYKREV 66
           +F++QYF+P+  I++CY + V
Sbjct: 213 LFLLQYFVPLGFILICYLKIV 233


>U79526-1|AAC51258.1|  373|Homo sapiens orphan G-protein coupled
           receptor Dez isoform a protein.
          Length = 373

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +1

Query: 7   FVVQYFIPILMIILCYKREV*S*HINNIMATTIKMILIASVITQIF 144
           F+  + +P+L+I  CY   V   H N +  T     +I ++I   F
Sbjct: 225 FLCGFLVPVLIITACYLTIVCKLHRNRLAKTKKPFKIIVTIIITFF 270


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,931,536
Number of Sequences: 237096
Number of extensions: 513734
Number of successful extensions: 1079
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 76,859,062
effective HSP length: 72
effective length of database: 59,788,150
effective search space used: 1375127450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)