Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_H09
         (684 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    26   0.38 
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    25   0.89 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   3.6  
AY739659-1|AAU85298.1|  288|Apis mellifera hyperpolarization-act...    22   4.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   6.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   6.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.3  

>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +2

Query: 440 YGMAKGAVHQLTKSLGGKDSGLPENSLVVAIMPVTLDTEMNRKWM 574
           Y  +K A+  LT  L  + +    N  V++I P  ++T+M  +W+
Sbjct: 161 YLASKCALTTLTDCLRSELAQCESNIKVISISPDLVETDMTAQWL 205


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = -1

Query: 639 IHLSNN*ATKVNGVHELKSALGIHFLFISVSSVTGIIATTSEFSGRPESLPPR 481
           I  S    T +  V  L+  LG H     + S   ++ +   F  +PE++P R
Sbjct: 193 IEYSTGNFTCIQIVFNLRRRLGYHLFHTYIPSALIVVMSWIAFWIKPEAIPAR 245


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -1

Query: 654 RSSPLIHLSNN*ATKVNGVHELKSAL 577
           R +  + L+ N ATKVN VHE +S+L
Sbjct: 26  RGAADLSLAGN-ATKVNTVHEEESSL 50


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 172 VGTTGATCSQRTK*RFARSESECCY 246
           +G    TC+ +TK  FA+ +  C Y
Sbjct: 433 IGCECKTCNSKTKCCFAQDDGLCPY 457


>AY739659-1|AAU85298.1|  288|Apis mellifera
           hyperpolarization-activated ion channelvariant T
           protein.
          Length = 288

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/49 (22%), Positives = 23/49 (46%)
 Frame = -2

Query: 398 QSRQVIHPAPSILQLMWLRLSNSRPIAATSSLPAYSGPWQRFRLPNHQR 252
           +S Q++H   ++  L   +L +   +   S L  Y   W+   +P +Q+
Sbjct: 194 ESFQILHAGRALRILRLAKLLSLVRLLRLSRLVRYVSQWEEVYIPLYQQ 242


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 196 YMLLLLYPRGIFR 158
           Y  LL YPR IFR
Sbjct: 382 YSSLLRYPRSIFR 394


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +2

Query: 35  IIYGGRGALGSACVNHFKSSNWWVANIDLNPNESA 139
           I+ GG  A         + SNW V  ++  P+E A
Sbjct: 72  IVVGGGAARAVVAGRLSEVSNWKVLLLEAGPDEPA 106


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -1

Query: 405 LAPVKASNPPGAKYFAANVAAIVELQ 328
           + PV    PP    F+    A+VE Q
Sbjct: 1   MGPVFVKEPPNRVDFSNGTGAVVECQ 26


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,420
Number of Sequences: 438
Number of extensions: 4206
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)