Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_H06
(317 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83128-1|CAB05635.1| 92|Caenorhabditis elegans Hypothetical pr... 114 1e-26
Z77131-1|CAB00854.1| 91|Caenorhabditis elegans Hypothetical pr... 105 7e-24
AF098986-5|AAC67426.1| 671|Caenorhabditis elegans Hypothetical ... 31 0.18
U41275-2|AAA82465.1| 438|Caenorhabditis elegans Hypothetical pr... 31 0.24
U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical pr... 26 5.1
U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical pr... 26 5.1
U40800-3|AAA81490.1| 467|Caenorhabditis elegans Squashed vulva ... 25 8.9
L23646-5|ABD94102.1| 145|Caenorhabditis elegans Hypothetical pr... 25 8.9
L23646-4|AAA28039.1| 152|Caenorhabditis elegans Hypothetical pr... 25 8.9
AY147933-1|AAN39843.1| 467|Caenorhabditis elegans UDP-glucuroni... 25 8.9
AC024817-41|AAY86306.1| 152|Caenorhabditis elegans Hypothetical... 25 8.9
>Z83128-1|CAB05635.1| 92|Caenorhabditis elegans Hypothetical
protein W01D2.1 protein.
Length = 92
Score = 114 bits (275), Expect = 1e-26
Identities = 49/86 (56%), Positives = 61/86 (70%)
Frame = +3
Query: 12 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 191
MTKGT +FGK+ K+HTLC+RCG+SS+HIQK +CA CGYP AK R+Y+W K+
Sbjct: 1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTG 60
Query: 192 XXXMRHLKIVRRRFRNGFKEGKLTPK 269
RHL+ V RFRNGF+EG TPK
Sbjct: 61 TGRTRHLRDVNARFRNGFREG-TTPK 85
>Z77131-1|CAB00854.1| 91|Caenorhabditis elegans Hypothetical
protein C54C6.1 protein.
Length = 91
Score = 105 bits (252), Expect = 7e-24
Identities = 46/86 (53%), Positives = 58/86 (67%)
Frame = +3
Query: 12 MTKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 191
MTKGT +FGK+ K+HTLC+RCG+SS+HIQK +CA CGY AK R+Y+W K+
Sbjct: 1 MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60
Query: 192 XXXMRHLKIVRRRFRNGFKEGKLTPK 269
RHL+ V RFRNGF+ TPK
Sbjct: 61 TGRTRHLRDVNARFRNGFR--GTTPK 84
>AF098986-5|AAC67426.1| 671|Caenorhabditis elegans Hypothetical
protein C36C9.4 protein.
Length = 671
Score = 31.1 bits (67), Expect = 0.18
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 30 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 137
++ K TH C +CG+ + + KC CG P A
Sbjct: 93 TYNKNNFSTHHFCNKCGKVAQN--SKKCKHCGGPVA 126
>U41275-2|AAA82465.1| 438|Caenorhabditis elegans Hypothetical
protein T25D1.2 protein.
Length = 438
Score = 30.7 bits (66), Expect = 0.24
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 30 SFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPAA 137
++ K TH C +CG+ + + KC CG P A
Sbjct: 165 TYNKNNFSTHHFCNKCGKVAQN--SKKCKYCGGPVA 198
>U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical
protein W03B1.9 protein.
Length = 633
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 25 PQVLVSVGIRHIHYAEDVVDHLTTFRN 105
PQ L V + I+ E+++DHL + +N
Sbjct: 166 PQTLTRVCLTGIYLTENLLDHLASLKN 192
>U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical
protein W03B1.5 protein.
Length = 581
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 25 PQVLVSVGIRHIHYAEDVVDHLTTFRN 105
PQ L V + I+ E+++DHL + +N
Sbjct: 114 PQTLTRVCLTGIYLTENLLDHLASLKN 140
>U40800-3|AAA81490.1| 467|Caenorhabditis elegans Squashed vulva
protein 1 protein.
Length = 467
Score = 25.4 bits (53), Expect = 8.9
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 52 RHIHYAEDVVDHLTTFRNRNVRNVVILQPN*DHTIGQ 162
R Y D+VD L N N V + +HTIGQ
Sbjct: 345 RSFQYVTDLVDGLIKLMNSNYSLPVNIGNPEEHTIGQ 381
>L23646-5|ABD94102.1| 145|Caenorhabditis elegans Hypothetical
protein F44E2.6b protein.
Length = 145
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = +3
Query: 15 TKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPA 134
T T F K +C CG ++ A CG+PA
Sbjct: 42 TPHTGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPA 81
>L23646-4|AAA28039.1| 152|Caenorhabditis elegans Hypothetical
protein F44E2.6 protein.
Length = 152
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = +3
Query: 15 TKGTSSFGKRRNKTHTLCRRCGRSSYHIQKSKCAQCGYPA 134
T T F K +C CG ++ A CG+PA
Sbjct: 49 TPHTGGFNDHFEKGRYVCLCCGSELFNSDAKFWAGCGWPA 88
>AY147933-1|AAN39843.1| 467|Caenorhabditis elegans UDP-glucuronic
acid decarboxylase protein.
Length = 467
Score = 25.4 bits (53), Expect = 8.9
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 52 RHIHYAEDVVDHLTTFRNRNVRNVVILQPN*DHTIGQ 162
R Y D+VD L N N V + +HTIGQ
Sbjct: 345 RSFQYVTDLVDGLIKLMNSNYSLPVNIGNPEEHTIGQ 381
>AC024817-41|AAY86306.1| 152|Caenorhabditis elegans Hypothetical
protein Y54G2A.50 protein.
Length = 152
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 114 HISISECGKMIYHIFCI-VYVSYSDAYQNLR 25
H ISECGK ++C+ +S+ DA+ R
Sbjct: 49 HKPISECGKTTIGLWCMSPALSFFDAFNKTR 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,077,002
Number of Sequences: 27780
Number of extensions: 128772
Number of successful extensions: 308
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 308
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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