Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_H06
         (317 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    27   0.055
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   2.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   4.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   4.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   4.7  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    20   6.3  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    20   6.3  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    20   8.3  

>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 27.1 bits (57), Expect = 0.055
 Identities = 10/49 (20%), Positives = 27/49 (55%)
 Frame = -3

Query: 162 LTNGMISIWLQDNHIAHISISECGKMIYHIFCIVYVSYSDAYQNLRYPS 16
           +T  ++++WL+ +    + I+     I H+FC++ V +   +  ++ P+
Sbjct: 258 MTMTLMTLWLEPSSTERMIIANLN-FILHLFCLLDVQWRIPFNGIQMPN 305


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 156 NGMISIWLQDNHIAHISISECGK 88
           NG ++ W+  NH  H   S  G+
Sbjct: 342 NGSVTNWVSGNHDNHRVASRFGR 364


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +2

Query: 104 IEMCAMWLSC 133
           I +C +WL+C
Sbjct: 106 IHLCKLWLTC 115


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +2

Query: 104 IEMCAMWLSC 133
           I +C +WL+C
Sbjct: 106 IHLCKLWLTC 115


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +2

Query: 104 IEMCAMWLSC 133
           I +C +WL+C
Sbjct: 106 IHLCKLWLTC 115


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = +2

Query: 176 QEDYWNWPHASLENCQKAFPQWFQGRKTYT*KSRRFV 286
           ++D  + PHAS+ + +   P++         K  RF+
Sbjct: 421 EDDARHIPHASVTDSENTVPRYLSPDVISALKGVRFI 457


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 242 FQGRKTYT*KSRRFVVNLLIC 304
           F   K+    S  FVVNL IC
Sbjct: 73  FCAAKSLRTPSNMFVVNLAIC 93


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 179 EDYWNWPHASLENC 220
           E Y NW  A  +NC
Sbjct: 106 EPYPNWSWAKNQNC 119


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,580
Number of Sequences: 438
Number of extensions: 1649
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)