Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_H04
         (397 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    24   1.8  
CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    24   2.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   9.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   9.4  

>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
            protein.
          Length = 1087

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +3

Query: 12   DYTFNPKMRIILILLVSLGLCHADDIAQAAGQIFNSILPNL 134
            ++ F+P   ++ I  + + LC  D    A  Q   S  P L
Sbjct: 889  EFEFDPARTVLEICRIYVNLCECDAFCLAVSQDGRSYSPQL 929


>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 6   LLDYTFNPKMRIILILLVSLGLC 74
           +L+Y   PK R  ++ L+ LG+C
Sbjct: 253 VLEYVSAPKRRREMMTLIKLGVC 275


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = +3

Query: 75   HADDIAQAAGQIFNSILPNLISNSVTGQQGNTAQNTLQQ 191
            + DDI  A     NS+   L +  + G + N +   + Q
Sbjct: 2339 YKDDIPDAIADTCNSVWTILSNEGLIGPKSNFSMTAINQ 2377


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.8 bits (44), Expect = 9.4
 Identities = 10/39 (25%), Positives = 17/39 (43%)
 Frame = +3

Query: 75   HADDIAQAAGQIFNSILPNLISNSVTGQQGNTAQNTLQQ 191
            + DDI  A     NS+   L +  + G + N +   + Q
Sbjct: 2340 YKDDIPDAIADTCNSVWTILSNEGLIGPKSNFSMTAINQ 2378


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 386,015
Number of Sequences: 2352
Number of extensions: 6318
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31212099
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)