Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_H04
(397 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 30 0.52
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 30 0.52
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 29 0.91
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 29 0.91
U46753-12|AAM98047.2| 539|Caenorhabditis elegans Dishevelled re... 27 4.9
U46753-11|AAM98048.1| 425|Caenorhabditis elegans Dishevelled re... 27 4.9
U46753-10|AAM98049.1| 623|Caenorhabditis elegans Dishevelled re... 27 4.9
U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical pr... 27 6.4
AL033514-25|CAA22109.1| 570|Caenorhabditis elegans Hypothetical... 26 8.5
AF039044-12|AAG24130.2| 405|Caenorhabditis elegans Hypothetical... 26 8.5
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 30.3 bits (65), Expect = 0.52
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 237 SYDDMLRQVQDSTTDDDLLRISEEMFNADINNAFNYIQS 353
+YDD+LR +++ DD+ L + A+++NA +Q+
Sbjct: 1568 NYDDILRSIENEIRDDNELTAKNQEILAELSNAEQTLQN 1606
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 30.3 bits (65), Expect = 0.52
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 237 SYDDMLRQVQDSTTDDDLLRISEEMFNADINNAFNYIQS 353
+YDD+LR +++ DD+ L + A+++NA +Q+
Sbjct: 1568 NYDDILRSIENEIRDDNELTAKNQEILAELSNAEQTLQN 1606
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 29.5 bits (63), Expect = 0.91
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 135 ISNSVTGQQGNTAQNTLQQIGTVVGGVVD 221
+S ++ Q GN+AQ L +GT+V VD
Sbjct: 414 VSPTIMYQSGNSAQGVLNSLGTMVDNTVD 442
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 29.5 bits (63), Expect = 0.91
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 135 ISNSVTGQQGNTAQNTLQQIGTVVGGVVD 221
+S ++ Q GN+AQ L +GT+V VD
Sbjct: 396 VSPTIMYQSGNSAQGVLNSLGTMVDNTVD 424
>U46753-12|AAM98047.2| 539|Caenorhabditis elegans Dishevelled
related protein 1,isoform a protein.
Length = 539
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 129 NLISNSVTGQQGNTAQNTLQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDD 284
N + S+ GQ N N + + GG V + DM+ QV +++ ++
Sbjct: 312 NFLGISIVGQTSNCGDNGIYVANIMKGGAVALDGRIEAGDMILQVNETSFEN 363
>U46753-11|AAM98048.1| 425|Caenorhabditis elegans Dishevelled
related protein 1,isoform b protein.
Length = 425
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 129 NLISNSVTGQQGNTAQNTLQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDD 284
N + S+ GQ N N + + GG V + DM+ QV +++ ++
Sbjct: 180 NFLGISIVGQTSNCGDNGIYVANIMKGGAVALDGRIEAGDMILQVNETSFEN 231
>U46753-10|AAM98049.1| 623|Caenorhabditis elegans Dishevelled
related protein 1,isoform c protein.
Length = 623
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +3
Query: 129 NLISNSVTGQQGNTAQNTLQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDD 284
N + S+ GQ N N + + GG V + DM+ QV +++ ++
Sbjct: 312 NFLGISIVGQTSNCGDNGIYVANIMKGGAVALDGRIEAGDMILQVNETSFEN 363
>U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical
protein F46H5.4 protein.
Length = 2018
Score = 26.6 bits (56), Expect = 6.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 240 YDDMLRQVQDSTTDDDLLRISEEM 311
+ +RQ D T+D+D+ RI EM
Sbjct: 505 FSSFIRQEGDKTSDEDIYRICSEM 528
>AL033514-25|CAA22109.1| 570|Caenorhabditis elegans Hypothetical
protein Y75B8A.25 protein.
Length = 570
Score = 26.2 bits (55), Expect = 8.5
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +3
Query: 27 PKMRIILILLVSL--GLCHADDIA--QAAGQIFNSILPNLISNSVTGQQGNTAQNTLQQI 194
PK IL+ L++ H D + G I N+I+P L SNS G + +Q L Q+
Sbjct: 507 PKASFILLQLITTCKPRLHTDYARWNEMLGSIQNAIIPELESNSFEGDEAIVSQ--LAQM 564
Query: 195 GTVV 206
V+
Sbjct: 565 AAVL 568
>AF039044-12|AAG24130.2| 405|Caenorhabditis elegans Hypothetical
protein F48G7.11 protein.
Length = 405
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 108 FDQPLELCHRHDIALEKPVILKLFSFWD 25
FD L C H + KP +L S WD
Sbjct: 267 FDMDLSFCTHHSMDQLKPFLLAGISSWD 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,451,002
Number of Sequences: 27780
Number of extensions: 156833
Number of successful extensions: 475
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 475
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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