BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_G20
(675 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-2150|AAF48455.1| 2030|Drosophila melanogaster CG9198-PA... 30 2.5
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ... 29 5.8
BT003554-1|AAO39558.1| 307|Drosophila melanogaster LP10544p pro... 29 7.7
AY058485-1|AAL13714.1| 477|Drosophila melanogaster GM13341p pro... 29 7.7
AE014297-338|AAF51964.1| 477|Drosophila melanogaster CG2100-PA ... 29 7.7
>AE014298-2150|AAF48455.1| 2030|Drosophila melanogaster CG9198-PA,
isoform A protein.
Length = 2030
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 101 AFTQLIKMLAIMAPLPDSFVLPQLHSPITSVTDPSGLKLAPV 226
AF + + ML+ + P P S+ Q H+ S+ DP+G +L V
Sbjct: 608 AFEEELHMLSPIQPQPVSYTQRQAHNVCKSLRDPAGNRLTLV 649
>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
protein.
Length = 1286
Score = 29.1 bits (62), Expect = 5.8
Identities = 46/177 (25%), Positives = 68/177 (38%), Gaps = 9/177 (5%)
Frame = +1
Query: 166 TTTLTNYIGNRSLWSETRTCEFTSHQQ*VRVTGSCRWLRPAAYSLMNNV*-SCSIWTSLT 342
TTT T+ + S T TC + R T + RP + + S S T+ T
Sbjct: 436 TTTTTSRPTTTTPRSTTTTCTCSPTTTTPRSTTTTSTSRPTTTTPRSTTTTSTSGPTTTT 495
Query: 343 PKMICLKRSRA---LHRRSNTIDYCC--TTTSQLACTHHHRPRSSRTVLISLTIFCS-S* 504
P+ + RS T C TTT+ + T R + T S T C+ S
Sbjct: 496 PRSTTTTTTSGPTTTTPRSTTTTCTCSPTTTTPRSTTTPSTSRPTTTTPRSTTTTCTCSP 555
Query: 505 TTPANQENISSNWLEEKVELPIFDHIPERVEPTPSSGCSSTDSHTLGPSTY--RSTT 669
TT + +++ P PT ++ S+T + T GP+T RSTT
Sbjct: 556 TTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTTSTSGPTTTTPRSTT 612
>BT003554-1|AAO39558.1| 307|Drosophila melanogaster LP10544p
protein.
Length = 307
Score = 28.7 bits (61), Expect = 7.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 288 GLLTDEQCLELLDLDIFNTEDDLLKTFPSAAPKI 389
GL+ DE L D D T DDLLK P+ KI
Sbjct: 263 GLVMDELKLLWADSDFQLTHDDLLKWIPNVLKKI 296
>AY058485-1|AAL13714.1| 477|Drosophila melanogaster GM13341p
protein.
Length = 477
Score = 28.7 bits (61), Expect = 7.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 288 GLLTDEQCLELLDLDIFNTEDDLLKTFPSAAPKI 389
GL+ DE L D D T DDLLK P+ KI
Sbjct: 433 GLVMDELKLLWADSDFQLTHDDLLKWIPNVLKKI 466
>AE014297-338|AAF51964.1| 477|Drosophila melanogaster CG2100-PA
protein.
Length = 477
Score = 28.7 bits (61), Expect = 7.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 288 GLLTDEQCLELLDLDIFNTEDDLLKTFPSAAPKI 389
GL+ DE L D D T DDLLK P+ KI
Sbjct: 433 GLVMDELKLLWADSDFQLTHDDLLKWIPNVLKKI 466
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,016,055
Number of Sequences: 53049
Number of extensions: 735097
Number of successful extensions: 2253
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2251
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -