SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_G20
         (675 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2150|AAF48455.1| 2030|Drosophila melanogaster CG9198-PA...    30   2.5  
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ...    29   5.8  
BT003554-1|AAO39558.1|  307|Drosophila melanogaster LP10544p pro...    29   7.7  
AY058485-1|AAL13714.1|  477|Drosophila melanogaster GM13341p pro...    29   7.7  
AE014297-338|AAF51964.1|  477|Drosophila melanogaster CG2100-PA ...    29   7.7  

>AE014298-2150|AAF48455.1| 2030|Drosophila melanogaster CG9198-PA,
           isoform A protein.
          Length = 2030

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +2

Query: 101 AFTQLIKMLAIMAPLPDSFVLPQLHSPITSVTDPSGLKLAPV 226
           AF + + ML+ + P P S+   Q H+   S+ DP+G +L  V
Sbjct: 608 AFEEELHMLSPIQPQPVSYTQRQAHNVCKSLRDPAGNRLTLV 649


>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
           protein.
          Length = 1286

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 46/177 (25%), Positives = 68/177 (38%), Gaps = 9/177 (5%)
 Frame = +1

Query: 166 TTTLTNYIGNRSLWSETRTCEFTSHQQ*VRVTGSCRWLRPAAYSLMNNV*-SCSIWTSLT 342
           TTT T+     +  S T TC  +      R T +    RP   +  +    S S  T+ T
Sbjct: 436 TTTTTSRPTTTTPRSTTTTCTCSPTTTTPRSTTTTSTSRPTTTTPRSTTTTSTSGPTTTT 495

Query: 343 PKMICLKRSRA---LHRRSNTIDYCC--TTTSQLACTHHHRPRSSRTVLISLTIFCS-S* 504
           P+      +        RS T    C  TTT+  + T     R + T   S T  C+ S 
Sbjct: 496 PRSTTTTTTSGPTTTTPRSTTTTCTCSPTTTTPRSTTTPSTSRPTTTTPRSTTTTCTCSP 555

Query: 505 TTPANQENISSNWLEEKVELPIFDHIPERVEPTPSSGCSSTDSHTLGPSTY--RSTT 669
           TT   +   +++        P          PT ++  S+T + T GP+T   RSTT
Sbjct: 556 TTTTPRSTTTTSTSRPTTTTPRSTTTTTTSRPTTTTPRSTTTTSTSGPTTTTPRSTT 612


>BT003554-1|AAO39558.1|  307|Drosophila melanogaster LP10544p
           protein.
          Length = 307

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = +3

Query: 288 GLLTDEQCLELLDLDIFNTEDDLLKTFPSAAPKI 389
           GL+ DE  L   D D   T DDLLK  P+   KI
Sbjct: 263 GLVMDELKLLWADSDFQLTHDDLLKWIPNVLKKI 296


>AY058485-1|AAL13714.1|  477|Drosophila melanogaster GM13341p
           protein.
          Length = 477

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = +3

Query: 288 GLLTDEQCLELLDLDIFNTEDDLLKTFPSAAPKI 389
           GL+ DE  L   D D   T DDLLK  P+   KI
Sbjct: 433 GLVMDELKLLWADSDFQLTHDDLLKWIPNVLKKI 466


>AE014297-338|AAF51964.1|  477|Drosophila melanogaster CG2100-PA
           protein.
          Length = 477

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = +3

Query: 288 GLLTDEQCLELLDLDIFNTEDDLLKTFPSAAPKI 389
           GL+ DE  L   D D   T DDLLK  P+   KI
Sbjct: 433 GLVMDELKLLWADSDFQLTHDDLLKWIPNVLKKI 466


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,016,055
Number of Sequences: 53049
Number of extensions: 735097
Number of successful extensions: 2253
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2251
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -