Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_G19
(553 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85; E... 211 9e-54
UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3; Schi... 169 5e-41
UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3; Acon... 169 5e-41
UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10; V... 168 6e-41
UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3; Bi... 168 9e-41
UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB... 166 3e-40
UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6; Tr... 163 2e-39
UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2; Cry... 151 8e-36
UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1; Ostr... 146 2e-34
UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1; ... 142 6e-33
UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8; Euka... 133 3e-30
UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chai... 127 1e-28
UniRef50_UPI000155FE5D Cluster: PREDICTED: similar to Proteasome... 126 3e-28
UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2; Gi... 123 3e-27
UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1; En... 118 7e-26
UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10... 68 1e-10
UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2... 66 7e-10
UniRef50_UPI000155D394 Cluster: PREDICTED: similar to Proteasome... 65 1e-09
UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1; Guil... 64 3e-09
UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1; ... 64 3e-09
UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 62 6e-09
UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5; Thermopr... 60 3e-08
UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2; ... 60 3e-08
UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;... 60 3e-08
UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1; ... 60 4e-08
UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome... 59 6e-08
UniRef50_A2BN27 Cluster: Proteasome beta; n=3; Desulfurococcales... 58 1e-07
UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum... 54 2e-06
UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precurso... 53 4e-06
UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;... 52 7e-06
UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;... 52 7e-06
UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;... 52 9e-06
UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:... 50 4e-05
UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7; Halobac... 46 4e-04
UniRef50_Q9VNA5 Cluster: Probable proteasome subunit beta type-4... 46 6e-04
UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;... 46 8e-04
UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of str... 45 0.001
UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3; Fung... 45 0.001
UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;... 45 0.001
UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precurso... 45 0.001
UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1; ... 44 0.002
UniRef50_Q980L4 Cluster: Proteasome subunit; n=4; Sulfolobaceae|... 44 0.002
UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1; En... 44 0.003
UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2; Desulfuro... 44 0.003
UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giar... 42 0.010
UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2; Cryp... 42 0.013
UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4; The... 41 0.022
UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7; Tr... 41 0.022
UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core ... 40 0.038
UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7; Vi... 40 0.038
UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, wh... 40 0.051
UniRef50_A6R393 Cluster: Proteasome component C5; n=5; Ascomycot... 39 0.067
UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Or... 39 0.067
UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type fam... 39 0.089
UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome... 38 0.15
UniRef50_Q08058 Cluster: Coenzyme Q-binding protein COQ10, mitoc... 38 0.15
UniRef50_A1R6Q7 Cluster: Putative 20S proteasome beta-subunit; n... 37 0.27
UniRef50_Q9ZRY9 Cluster: 20S proteasome beta subunit; n=8; Magno... 37 0.27
UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1; ... 37 0.27
UniRef50_P28062 Cluster: Proteasome subunit beta type-8 precurso... 37 0.27
UniRef50_Q7R530 Cluster: Proteasome subunit beta type; n=1; Giar... 37 0.36
UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2; Dict... 37 0.36
UniRef50_A6R7Q1 Cluster: Proteasome component PRE3; n=1; Ajellom... 37 0.36
UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A precur... 37 0.36
UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2; Cryp... 36 0.47
UniRef50_UPI0000499449 Cluster: proteasome beta subunit; n=1; En... 36 0.63
UniRef50_P23724 Cluster: Proteasome component C5; n=23; Fungi/Me... 36 0.63
UniRef50_Q59PN5 Cluster: Putative uncharacterized protein; n=2; ... 36 0.83
UniRef50_Q4P203 Cluster: Proteasome subunit beta type; n=1; Usti... 36 0.83
UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2; Ca... 36 0.83
UniRef50_P28065 Cluster: Proteasome subunit beta type-9 precurso... 35 1.4
UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;... 34 1.9
UniRef50_Q6BWC7 Cluster: Similar to CA2356|IPF12282 Candida albi... 34 2.5
UniRef50_Q9USQ9 Cluster: Probable proteasome subunit beta type-4... 34 2.5
UniRef50_Q7R9U3 Cluster: Proteasome subunit beta type; n=5; Plas... 33 3.3
UniRef50_Q6FMY8 Cluster: Similar to sp|P14681 Saccharomyces cere... 33 3.3
UniRef50_P22141 Cluster: Proteasome component C11; n=36; Ascomyc... 33 3.3
UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1; Plas... 33 4.4
UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1; Tric... 33 4.4
UniRef50_Q09544 Cluster: ATP synthase delta chain, mitochondrial... 33 5.8
UniRef50_Q4WYZ1 Cluster: Fungal specific transcription factor, p... 32 7.7
UniRef50_A1L020 Cluster: RNA-binding protein MEX3A; n=19; Eutele... 32 7.7
>UniRef50_P49720 Cluster: Proteasome subunit beta type-3; n=85;
Eukaryota|Rep: Proteasome subunit beta type-3 - Homo
sapiens (Human)
Length = 205
Score = 211 bits (515), Expect = 9e-54
Identities = 92/142 (64%), Positives = 116/142 (81%)
Frame = +2
Query: 38 ASEIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCN 217
A +KFR+NLYELKE R +KP T +M++NLLYEKRFGPY+ EPVIAGLDP P++C+
Sbjct: 64 AQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICS 123
Query: 218 MDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGW 397
+DLIGCP +DFVVSGTC+EQ+YGMCE+LWEPN+ PD LFETISQA++ A D DA+SG
Sbjct: 124 LDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAVSGM 183
Query: 398 GAVVYIIEXDKITEKHVQTRMD 463
G +V+IIE DKIT + ++ RMD
Sbjct: 184 GVIVHIIEKDKITTRTLKARMD 205
>UniRef50_Q86E06 Cluster: Proteasome subunit beta type; n=3;
Schistosoma japonicum|Rep: Proteasome subunit beta type
- Schistosoma japonicum (Blood fluke)
Length = 209
Score = 169 bits (410), Expect = 5e-41
Identities = 75/118 (63%), Positives = 93/118 (78%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDL 226
++FR N+YEL+ENR +KP+T + MLSNLLYE+RFGPYF+EPV+AG+D + PYV MDL
Sbjct: 67 LQFRKNMYELRENRTIKPQTITTMLSNLLYERRFGPYFVEPVVAGIDHTTSKPYVACMDL 126
Query: 227 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWG 400
IGC E DFVVSGTC+EQ+YGMCE LWE N+ ELFE ISQ ++ A + DAISG G
Sbjct: 127 IGCVCEANDFVVSGTCTEQMYGMCETLWEENMDSKELFECISQCILNALNRDAISGLG 184
>UniRef50_Q4U969 Cluster: Proteasome subunit beta type; n=3;
Aconoidasida|Rep: Proteasome subunit beta type -
Theileria annulata
Length = 220
Score = 169 bits (410), Expect = 5e-41
Identities = 72/140 (51%), Positives = 107/140 (76%)
Frame = +2
Query: 44 EIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMD 223
EI F++N+Y+L+ ++ M KT S M+ ++LY +RFGP+F++ VIAGLD D++PY+ D
Sbjct: 82 EIMFKVNMYKLRGDKEMSVKTLSNMVGSMLYSRRFGPWFVDSVIAGLDT-DSSPYITCFD 140
Query: 224 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGA 403
L+G P P DFVV+GTCSEQLYG+CEAL++P + P++LFET+SQ L+ D D +SGWGA
Sbjct: 141 LVGAPCTPTDFVVAGTCSEQLYGVCEALFKPGMDPEQLFETVSQCLMAGIDRDCLSGWGA 200
Query: 404 VVYIIEXDKITEKHVQTRMD 463
V++I D++ + ++TRMD
Sbjct: 201 EVHVITPDRVISRSLKTRMD 220
>UniRef50_Q9LST7 Cluster: Proteasome subunit beta type-3; n=10;
Viridiplantae|Rep: Proteasome subunit beta type-3 -
Oryza sativa subsp. japonica (Rice)
Length = 204
Score = 168 bits (409), Expect = 6e-41
Identities = 76/137 (55%), Positives = 102/137 (74%)
Frame = +2
Query: 53 FRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIG 232
FR LY+L+E R MKP+TF++++S LLYEKRFGPYF +PVIAGL DN P++C MD IG
Sbjct: 69 FRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGE-DNEPFICTMDCIG 127
Query: 233 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVY 412
+DFVVSGT SE LYG CE++++PN++P+ELFETISQAL + D D +SGWG V
Sbjct: 128 AKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQSSVDRDCLSGWGGFVL 187
Query: 413 IIEXDKITEKHVQTRMD 463
++ ++ E ++ RMD
Sbjct: 188 LVTPTEVKECVIKGRMD 204
>UniRef50_Q23237 Cluster: Proteasome subunit beta type-3; n=3;
Bilateria|Rep: Proteasome subunit beta type-3 -
Caenorhabditis elegans
Length = 204
Score = 168 bits (408), Expect = 9e-41
Identities = 76/140 (54%), Positives = 96/140 (68%)
Frame = +2
Query: 44 EIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMD 223
+I FR NLYEL+ENR +KP+ S M+SNL Y+ RFG YF EP++AGLD N PY+C MD
Sbjct: 66 KIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDD-TNKPYICCMD 124
Query: 224 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGA 403
IGC + P DFV GT E L G+CE W N+KPDELFE +Q+++ + DA SGWGA
Sbjct: 125 TIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCLERDAASGWGA 184
Query: 404 VVYIIEXDKITEKHVQTRMD 463
VVY I DK+ ++ RMD
Sbjct: 185 VVYTITKDKVNVSTIKARMD 204
>UniRef50_Q2VIK4 Cluster: RcPSMB3; n=15; Euteleostomi|Rep: RcPSMB3 -
Homo sapiens (Human)
Length = 204
Score = 166 bits (404), Expect = 3e-40
Identities = 73/138 (52%), Positives = 105/138 (76%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDL 226
+KF++NLYELKE + +KP TF++M++N LYEK FGPY+ +PVIAGLD P+ C++DL
Sbjct: 67 LKFQLNLYELKEGQQIKPYTFTSMVANFLYEKHFGPYYTDPVIAGLDLKTFKPFSCSLDL 126
Query: 227 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAV 406
IG P +DFVV+G+ +EQ+YGMCE+LWEPN+ P+ FETIS A++ A D A SG G +
Sbjct: 127 IGFPMVTDDFVVNGSYAEQMYGMCESLWEPNMDPEHPFETISPAMLNAVDWGAGSGMGVI 186
Query: 407 VYIIEXDKITEKHVQTRM 460
++I + DKIT + ++ +M
Sbjct: 187 IHITKKDKITTRTLKAQM 204
>UniRef50_Q9NDA1 Cluster: Proteasome subunit beta type-3; n=6;
Trypanosomatidae|Rep: Proteasome subunit beta type-3 -
Trypanosoma brucei brucei
Length = 205
Score = 163 bits (397), Expect = 2e-39
Identities = 70/142 (49%), Positives = 102/142 (71%)
Frame = +2
Query: 38 ASEIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCN 217
A ++ FR +Y+L+E R + K F+A++S++LYE RFGP+F+EPVI +D Y+C
Sbjct: 64 AQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVYLCA 123
Query: 218 MDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGW 397
DLIG P EPED+V +GTC+E L+GMCEALW P L+P+ELFE +QA++ A D D++SG+
Sbjct: 124 TDLIGAPCEPEDYVCAGTCAESLHGMCEALWRPGLEPEELFEVAAQAMLSACDRDSLSGY 183
Query: 398 GAVVYIIEXDKITEKHVQTRMD 463
GAV I+ DK+ + ++ R D
Sbjct: 184 GAVAAIVTKDKLVTRLIKGRKD 205
>UniRef50_Q5CU29 Cluster: Possible proteasome component; n=2;
Cryptosporidium|Rep: Possible proteasome component -
Cryptosporidium parvum Iowa II
Length = 204
Score = 151 bits (367), Expect = 8e-36
Identities = 65/139 (46%), Positives = 96/139 (69%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDL 226
IKF+ NLY L+E R + K S M +++LY KRF PYF+EP++AGLD +N P++ DL
Sbjct: 67 IKFKTNLYHLREEREIGVKALSHMTASILYSKRFSPYFVEPIVAGLDN-NNVPFIAGYDL 125
Query: 227 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAV 406
IGC + +F +SGT QL+G+CE+ + P+L+PDEL E +SQ ++ D DA SGWG
Sbjct: 126 IGCLSVCSEFAISGTADNQLFGICESYYRPDLEPDELMEIVSQCMLSGIDRDAFSGWGCK 185
Query: 407 VYIIEXDKITEKHVQTRMD 463
VY++ +K+ K +++RMD
Sbjct: 186 VYLLTPEKLVTKTLKSRMD 204
>UniRef50_Q01FQ8 Cluster: Proteasome subunit beta type; n=1;
Ostreococcus tauri|Rep: Proteasome subunit beta type -
Ostreococcus tauri
Length = 203
Score = 146 bits (355), Expect = 2e-34
Identities = 65/142 (45%), Positives = 96/142 (67%)
Frame = +2
Query: 38 ASEIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCN 217
A +++F+ ++YEL+ENR+M PK F++++S LYEKRF PY+ EPV+AGLD D PY+ +
Sbjct: 63 AQKLRFKHDMYELRENRVMSPKVFASVVSTTLYEKRFQPYYTEPVVAGLDK-DGKPYITS 121
Query: 218 MDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGW 397
MDLIG +DFVV+G E L+G+CE+ + +L+PDELF I L + D +SGW
Sbjct: 122 MDLIGADASADDFVVAGDNVESLFGVCESFYRKDLEPDELFNVIGNCLNAGVNRDCLSGW 181
Query: 398 GAVVYIIEXDKITEKHVQTRMD 463
G +V +I D + ++ RMD
Sbjct: 182 GGIVTLITKDGPITRTLKNRMD 203
>UniRef50_Q8GZE1 Cluster: Beta 3 subunit of 20S proteasome; n=1;
Pyrocystis lunula|Rep: Beta 3 subunit of 20S proteasome
- Pyrocystis lunula (Dinoflagellate)
Length = 214
Score = 142 bits (343), Expect = 6e-33
Identities = 61/118 (51%), Positives = 87/118 (73%)
Frame = +2
Query: 38 ASEIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCN 217
A + FR+ L+ L+E R M+P+T ++S++LYEKRFGPYF EPV+AGLD D+ P++C
Sbjct: 66 AQLLDFRIKLFSLREERTMQPQTVGNLISSILYEKRFGPYFTEPVVAGLDK-DHNPFLCA 124
Query: 218 MDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAIS 391
D IG ++ +DFVVSGT SEQL+G+CE+ W P + DELFET++Q L+ A D D ++
Sbjct: 125 FDFIGAMSKAQDFVVSGTSSEQLFGVCESFWRPKMNKDELFETLAQCLLSAVDRDCLA 182
>UniRef50_A5K9T5 Cluster: Proteasome subunit beta type; n=8;
Eukaryota|Rep: Proteasome subunit beta type - Plasmodium
vivax
Length = 218
Score = 133 bits (321), Expect = 3e-30
Identities = 68/150 (45%), Positives = 94/150 (62%), Gaps = 11/150 (7%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAG------LDPYDNT-- 202
+++R+NLYE+++ M F+ MLS++LY RF PYF+ P++ G LD
Sbjct: 69 LRYRVNLYEIRQETPMDIDCFANMLSSILYANRFSPYFVNPIVVGFRVQHTLDDEGKKVC 128
Query: 203 ---PYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAA 373
PY+ DLIG E +DFVV+G SEQLYGMCE+L+ + D LFETISQ L+ A
Sbjct: 129 SFEPYLTAYDLIGAKCETKDFVVNGVTSEQLYGMCESLYIKDQDKDGLFETISQCLLSAL 188
Query: 374 D*DAISGWGAVVYIIEXDKITEKHVQTRMD 463
D D +SGWGA VY++ D I +K ++ RMD
Sbjct: 189 DRDCLSGWGAEVYVLTPDTIMKKKLKARMD 218
>UniRef50_Q8SSI0 Cluster: 26S PROTEASOME BETA SUBUNIT, theta chain;
n=1; Encephalitozoon cuniculi|Rep: 26S PROTEASOME BETA
SUBUNIT, theta chain - Encephalitozoon cuniculi
Length = 205
Score = 127 bits (307), Expect = 1e-28
Identities = 61/140 (43%), Positives = 87/140 (62%)
Frame = +2
Query: 44 EIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMD 223
+I+ NL+ L+ R M+P+ S+M+S LLY KR PY P++AGL D PY+ MD
Sbjct: 67 KIRKNYNLFRLEHQREMEPEELSSMISFLLYSKRETPYITAPIVAGLTS-DGKPYISGMD 125
Query: 224 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGA 403
IG P DFV GT + L G+CEAL+ P++ + LF T QA + A D DA+SGWGA
Sbjct: 126 CIGSIASPGDFVAVGTADKNLMGICEALYRPDMDEENLFVTCVQAFLNAIDRDALSGWGA 185
Query: 404 VVYIIEXDKITEKHVQTRMD 463
Y+I +K+T++ ++ R D
Sbjct: 186 DCYVIGKNKVTKRSIKGRCD 205
>UniRef50_UPI000155FE5D Cluster: PREDICTED: similar to Proteasome
(prosome, macropain) subunit, beta type, 3; n=1; Equus
caballus|Rep: PREDICTED: similar to Proteasome (prosome,
macropain) subunit, beta type, 3 - Equus caballus
Length = 168
Score = 126 bits (304), Expect = 3e-28
Identities = 64/142 (45%), Positives = 95/142 (66%)
Frame = +2
Query: 38 ASEIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCN 217
A +KF++NL EL E +KP T ++++NLLY+K+FGP + EPVIA LD TP++C+
Sbjct: 31 AQHLKFQLNLCELNEGSQIKPYTLMSVMANLLYKKQFGPCYTEPVIAWLDLKTFTPFLCS 90
Query: 218 MDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGW 397
+DLI CP +DFVVS TC+EQ+ GMCE+L + L ET+SQA++ A D DA +
Sbjct: 91 LDLISCPVVTDDFVVSSTCAEQMCGMCESLGAHHA---HLLETVSQAMLNAVDGDA-ARC 146
Query: 398 GAVVYIIEXDKITEKHVQTRMD 463
+ ++ E DK T + ++ +MD
Sbjct: 147 KSHFHLAEEDKTTTRILKAQMD 168
>UniRef50_Q9N9W8 Cluster: Proteasome subunit beta type-3; n=2;
Giardia intestinalis|Rep: Proteasome subunit beta type-3
- Giardia lamblia (Giardia intestinalis)
Length = 207
Score = 123 bits (296), Expect = 3e-27
Identities = 58/141 (41%), Positives = 91/141 (64%), Gaps = 1/141 (0%)
Frame = +2
Query: 44 EIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMD 223
+I+ + NLY L+E+R ++P+ + M+S+ LY+ RFGPYFI P+IAG + D PY+ MD
Sbjct: 68 QIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEA-DGKPYLGAMD 126
Query: 224 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGA 403
IGC ++ +F ++GT S+ L G+CE +P++ DE+ + Q + A + DA SGWGA
Sbjct: 127 TIGCLDDCTNFQIAGTASDFLLGLCETHVKPDMSEDEILPLMEQIIRSATNRDAYSGWGA 186
Query: 404 VVYIIEXDKIT-EKHVQTRMD 463
V ++ D T + + TRMD
Sbjct: 187 HVVVLRRDGTTSDIPISTRMD 207
>UniRef50_UPI000049A243 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 205
Score = 118 bits (285), Expect = 7e-26
Identities = 55/142 (38%), Positives = 89/142 (62%)
Frame = +2
Query: 38 ASEIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCN 217
A ++K+ NLY L+E + P+ +++LY+KRF PY++ P+IAG+D N+ YVC+
Sbjct: 66 AEKVKYHANLYRLREGHDIGPEQLLNSTAHMLYKKRFQPYYMSPIIAGIDDNGNS-YVCS 124
Query: 218 MDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGW 397
D IG P + V GT S +L GMC++ ++ ++P+EL E + Q L+ A + DA SGW
Sbjct: 125 YDYIGSPEISQVGCV-GTGSNELMGMCDSFYKEGMEPEELVEAVGQCLLAAENRDAFSGW 183
Query: 398 GAVVYIIEXDKITEKHVQTRMD 463
G VY++ D +T +++ R D
Sbjct: 184 GVEVYLLTRDNLTIYNMKPRQD 205
>UniRef50_Q9P996 Cluster: Proteasome subunit beta precursor; n=10;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Archaeoglobus fulgidus
Length = 213
Score = 68.1 bits (159), Expect = 1e-10
Identities = 42/128 (32%), Positives = 65/128 (50%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDL 226
IK NLYE++ R + + + SNLL R+ PY ++ +I G+D + Y ++D
Sbjct: 70 IKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIY--SIDP 127
Query: 227 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAV 406
IG E +D V +G+ S YG+ E + P + DE E +A+ A D+ SG G
Sbjct: 128 IGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGID 187
Query: 407 VYIIEXDK 430
V I D+
Sbjct: 188 VVKITEDE 195
>UniRef50_Q8TW10 Cluster: Protease subunit of the proteasome; n=2;
Euryarchaeota|Rep: Protease subunit of the proteasome -
Methanopyrus kandleri
Length = 210
Score = 65.7 bits (153), Expect = 7e-10
Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Frame = +2
Query: 65 LYELKENRIMKPKTFSAMLSNLLYE--KRFGPYFIEPVIAGLDPYDNTPYVCNMDLIGCP 238
LYEL+ NR++ + + M+S++L+ K F PY ++ ++ G + D+ P + N+D G
Sbjct: 75 LYELRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGFN--DDDPALYNLDPSGSI 132
Query: 239 NEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVYII 418
E ED+ +G+ S YG+ EA +E + D+ E +A+ A + D +G G V I
Sbjct: 133 IE-EDYTATGSGSPTAYGVLEAEYEEGMSLDDAIEVAVRAVKSALERDTGTGEGVTVVTI 191
Query: 419 EXDK 430
++
Sbjct: 192 TREE 195
>UniRef50_UPI000155D394 Cluster: PREDICTED: similar to Proteasome
(prosome, macropain) subunit, beta type, 3, partial;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED: similar to
Proteasome (prosome, macropain) subunit, beta type, 3,
partial - Ornithorhynchus anatinus
Length = 104
Score = 64.9 bits (151), Expect = 1e-09
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = +2
Query: 143 RFGPYFIEPVIAGLDPYDNTPYVCNMDLIGCPNEPEDFVV 262
RFGPY+ EPVIAGLDP P++C++DLIGCP +DFVV
Sbjct: 65 RFGPYYTEPVIAGLDPTTFEPFICSLDLIGCPMVTDDFVV 104
>UniRef50_Q98S25 Cluster: Proteasome subunit beta type; n=1;
Guillardia theta|Rep: Proteasome subunit beta type -
Guillardia theta (Cryptomonas phi)
Length = 200
Score = 63.7 bits (148), Expect = 3e-09
Identities = 28/105 (26%), Positives = 59/105 (56%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDL 226
+++ +++ KE + M+P +++S LLY+KRF PY +E ++AG + P++ +D
Sbjct: 64 LEYEISIVTKKEQKKMEPIEILSLISTLLYKKRFNPYLLEILVAGFTE-NGKPFLGTVDC 122
Query: 227 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQAL 361
IG + ++ G E ++ + + LW P + EL +S+++
Sbjct: 123 IGAISYISNYACIGNLCENIFPLIQFLWRPGMDLKELIILVSKSM 167
>UniRef50_A1RX71 Cluster: Proteasome endopeptidase complex; n=1;
Thermofilum pendens Hrk 5|Rep: Proteasome endopeptidase
complex - Thermofilum pendens (strain Hrk 5)
Length = 204
Score = 63.7 bits (148), Expect = 3e-09
Identities = 41/132 (31%), Positives = 69/132 (52%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDL 226
++ M LYEL N K T + +LS +LYE+R PY+ E V+ GLD + ++ ++D
Sbjct: 64 VEAEMRLYELDSNISPKVWTVAKLLSYILYERRLFPYYAEIVVGGLD--EEGSHLYSLDP 121
Query: 227 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAV 406
IG E +D+V G+ ++ + E+ ++ ++ DE +++ A DA SG G
Sbjct: 122 IGAIIE-DDYVALGSGTQLAISIVESNYKKDMSLDEALSLALKSVYAAMKRDAASGDGVD 180
Query: 407 VYIIEXDKITEK 442
V +I EK
Sbjct: 181 VLVIGKSGTLEK 192
>UniRef50_Q9YER0 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 219
Score = 62.5 bits (145), Expect = 6e-09
Identities = 37/134 (27%), Positives = 67/134 (50%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDL 226
++ + LYE+ + +++LSN+L+ +F PY ++ ++ G YD P + +DL
Sbjct: 84 LREEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGG---YDTQPRLYTLDL 140
Query: 227 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAV 406
G E + + +G+ S YG+ E + +L +E + + A+ A DA SG GA
Sbjct: 141 FGSITE-DKYTATGSGSPIAYGVLEERYREDLSVEEAIKVATTAIRSAVLRDAASGDGAD 199
Query: 407 VYIIEXDKITEKHV 448
V +I EK +
Sbjct: 200 VVVIGPQGYEEKFI 213
>UniRef50_Q8ZST5 Cluster: Proteasome, beta subunit; n=5;
Thermoproteaceae|Rep: Proteasome, beta subunit -
Pyrobaculum aerophilum
Length = 203
Score = 60.5 bits (140), Expect = 3e-08
Identities = 35/141 (24%), Positives = 74/141 (52%)
Frame = +2
Query: 38 ASEIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCN 217
A +K YEL+ R + + +LS +++ +RF P+F E ++ G+D + P++
Sbjct: 64 AKILKLNAKAYELEMKRKPSTHSMARLLSVIMFSRRFMPFFAEVLVGGID--EEGPHLIV 121
Query: 218 MDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGW 397
MD +G E +++ GT ++ + + + P++ +E + QAL A + D +SG
Sbjct: 122 MDPLGSLIE-DNYAALGTGAKLAVAVLDTGYRPDITVEEAKKLAVQALKAAIERDPVSGG 180
Query: 398 GAVVYIIEXDKITEKHVQTRM 460
G + I++ + E+ V+ ++
Sbjct: 181 GIDLAIVDKNGAREEEVRVQL 201
>UniRef50_A7D410 Cluster: Proteasome endopeptidase complex; n=2;
Halorubrum|Rep: Proteasome endopeptidase complex -
Halorubrum lacusprofundi ATCC 49239
Length = 243
Score = 60.5 bits (140), Expect = 3e-08
Identities = 36/134 (26%), Positives = 69/134 (51%)
Frame = +2
Query: 32 NRASEIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYV 211
N S +K +LYE + + M + S + NLL F Y ++P++ G+D D ++
Sbjct: 103 NLISTLKAETSLYETRRGKDMSMEALSTLTGNLLRSGAF--YIVQPILGGVD--DEGSHI 158
Query: 212 CNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAIS 391
++D +G E E++ V+G+ S+ G+ E ++ ++ DE ++A+ A + D S
Sbjct: 159 YSIDALGGTTE-EEYTVTGSGSQYALGVLEQEYDDDVTVDEAKTMAAKAIQSAVERDLAS 217
Query: 392 GWGAVVYIIEXDKI 433
G G V ++ D +
Sbjct: 218 GNGINVAVVTDDGV 231
>UniRef50_Q58634 Cluster: Proteasome subunit beta precursor; n=9;
Euryarchaeota|Rep: Proteasome subunit beta precursor -
Methanococcus jannaschii
Length = 224
Score = 60.5 bits (140), Expect = 3e-08
Identities = 34/123 (27%), Positives = 64/123 (52%)
Frame = +2
Query: 65 LYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIGCPNE 244
LY+++ R + P + +LSN+L+ R P+ + +I G D + + ++D +G NE
Sbjct: 71 LYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAK-LFSLDPLGGMNE 129
Query: 245 PEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVYIIEX 424
+ F +G+ S YG+ EA ++ ++ +E + AL A + D SG G + +I
Sbjct: 130 EKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISLAVITK 189
Query: 425 DKI 433
D +
Sbjct: 190 DGV 192
>UniRef50_A7DSL9 Cluster: Proteasome endopeptidase complex; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Proteasome
endopeptidase complex - Candidatus Nitrosopumilus
maritimus SCM1
Length = 198
Score = 59.7 bits (138), Expect = 4e-08
Identities = 36/123 (29%), Positives = 66/123 (53%)
Frame = +2
Query: 71 ELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIGCPNEPE 250
ELK R + P T + M+SN++YE+R+ P + ++ G+ + P + +D +G P+
Sbjct: 76 ELK--RDVPPNTVAKMMSNMMYERRYFPLLTQVIVGGV---VDKPIMYTLDPLGSV-LPD 129
Query: 251 DFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVYIIEXDK 430
++ GT +E G+ + ++PN+ DE + +A+ A+ D+ SG G V +I D
Sbjct: 130 EYAAVGTGAEMALGVLDPQFKPNMTKDEAIDLAKRAVRAASLRDSASGDGVDVLVITKDG 189
Query: 431 ITE 439
E
Sbjct: 190 TEE 192
>UniRef50_UPI000155BA31 Cluster: PREDICTED: similar to proteasome
subunit RC10-II; n=2; Mammalia|Rep: PREDICTED: similar
to proteasome subunit RC10-II - Ornithorhynchus anatinus
Length = 181
Score = 59.3 bits (137), Expect = 6e-08
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = +2
Query: 275 SEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVYIIEXDKITEKHVQT 454
S+ + CE+ +P+ LFETISQA++ A D DA+SG G VV++IE +KIT + ++
Sbjct: 122 SQSPHARCES---SRREPEHLFETISQAMLNAVDRDAVSGMGVVVHVIEKNKITTRTLKA 178
Query: 455 RMD 463
RMD
Sbjct: 179 RMD 181
>UniRef50_A2BN27 Cluster: Proteasome beta; n=3;
Desulfurococcales|Rep: Proteasome beta - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 212
Score = 58.4 bits (135), Expect = 1e-07
Identities = 36/120 (30%), Positives = 58/120 (48%)
Frame = +2
Query: 68 YELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIGCPNEP 247
YE+ R M + LS +L+ +F PY ++ ++ G YD P + N+D G E
Sbjct: 81 YEIVNKRRMSIHAAAQYLSIILHSAKFYPYIVQLLLGG---YDTQPRLYNIDWFGSVTE- 136
Query: 248 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVYIIEXD 427
E +V +G+ S G+ E + PNL +E E +A+ + D +G G V +I D
Sbjct: 137 EKYVATGSGSPTAIGVIEDQYSPNLSMEEAVELAKRAVASSIRRDTFTGNGVDVVVIGKD 196
>UniRef50_Q9YES4 Cluster: Proteasome beta subunit; n=1; Aeropyrum
pernix|Rep: Proteasome beta subunit - Aeropyrum pernix
Length = 203
Score = 54.0 bits (124), Expect = 2e-06
Identities = 33/124 (26%), Positives = 66/124 (53%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDL 226
++ +M L L+ + + + LS+LLY +F P+ +E ++ G+DP P + +D
Sbjct: 64 VEGQMRLASLETGKPATVRNVAKFLSSLLYSYKFFPFNVEAIVGGIDP-GGEPKLYVLDP 122
Query: 227 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAV 406
+G E ED+V +GT + +G+ E +++ + +E + +AL + DA +G G
Sbjct: 123 LGSIIE-EDYVAAGTGATTAFGLLEHVYKRGMSLEEAKKAAVEALRASMARDAGTGDGID 181
Query: 407 VYII 418
V ++
Sbjct: 182 VLVL 185
>UniRef50_P20618 Cluster: Proteasome subunit beta type-1 precursor;
n=27; Eumetazoa|Rep: Proteasome subunit beta type-1
precursor - Homo sapiens (Human)
Length = 241
Score = 53.2 bits (122), Expect = 4e-06
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 9/148 (6%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDL 226
I+ R+ +Y+ N+ M +AMLS +LY +RF PY++ +I GLD + V + D
Sbjct: 96 IEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDE-EGKGAVYSFDP 154
Query: 227 IGCPNEPEDFVVSGTCSEQL---------YGMCEALWEPNLKPDELFETISQALVXAAD* 379
+G + + F G+ S L + + + L D + + AA+
Sbjct: 155 VG-SYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKDVFISAAER 213
Query: 380 DAISGWGAVVYIIEXDKITEKHVQTRMD 463
D +G + I+ + I E+ V R D
Sbjct: 214 DVYTGDALRICIVTKEGIREETVSLRKD 241
>UniRef50_Q4N2N3 Cluster: Proteasome beat subunit, putative; n=3;
Piroplasmida|Rep: Proteasome beat subunit, putative -
Theileria parva
Length = 218
Score = 52.4 bits (120), Expect = 7e-06
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 8/149 (5%)
Frame = +2
Query: 41 SEIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNM 220
S ++ ++ LY NR + +LS +LY +RF PY+ ++ G+D VC
Sbjct: 72 SVLERQIELYRYTHNREPTFNAIAQLLSTVLYGRRFFPYYTFNILCGIDE-QGKGVVCGY 130
Query: 221 DLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPN---LKP-----DELFETISQALVXAAD 376
D +G N E + GT S + + + L N +KP ++L + A+V A +
Sbjct: 131 DAVGNYNY-EKYTAQGTSSSLVISVLDNLLNGNNQKVKPEVNSLEDLVNLVKNAMVSAVE 189
Query: 377 *DAISGWGAVVYIIEXDKITEKHVQTRMD 463
D +G A + I + + H+ R+D
Sbjct: 190 RDICTGDSAELVICDGVVMEPVHMDLRID 218
>UniRef50_Q9IB84 Cluster: Proteasome subunit beta type-1-A; n=14;
Deuterostomia|Rep: Proteasome subunit beta type-1-A -
Carassius auratus (Goldfish)
Length = 238
Score = 52.4 bits (120), Expect = 7e-06
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDL 226
I+ R+ +Y+ N+ M +AMLS +LY +RF PY++ +I GLD + V + D
Sbjct: 93 IEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDE-EGRGAVYSFDP 151
Query: 227 IGCPNEPEDFVVSGTCSEQL---------YGMCEALWEPNLKPDELFETISQALVXAAD* 379
+G + + + G+ S L + E + + L ++ + + + AA+
Sbjct: 152 VG-SYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKDVFISAAER 210
Query: 380 DAISGWGAVVYIIEXDKITEKHVQTRMD 463
D +G + II + I E+ V R D
Sbjct: 211 DVYTGDALKICIITKEGIREEIVPLRKD 238
>UniRef50_P28061 Cluster: Proteasome subunit beta precursor; n=4;
Thermoplasmatales|Rep: Proteasome subunit beta precursor
- Thermoplasma acidophilum
Length = 211
Score = 52.0 bits (119), Expect = 9e-06
Identities = 30/116 (25%), Positives = 62/116 (53%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDL 226
+K + LY L+ M + + +LSN+L + ++ PY ++ ++ G+ D P+V ++D
Sbjct: 67 MKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGI---DTAPHVFSIDA 123
Query: 227 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISG 394
G E + + +G+ S +YG+ E+ + + DE + + +A+ A D+ SG
Sbjct: 124 AGGSVE-DIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASG 178
>UniRef50_Q74MP5 Cluster: NEQ203; n=1; Nanoarchaeum equitans|Rep:
NEQ203 - Nanoarchaeum equitans
Length = 196
Score = 50.0 bits (114), Expect = 4e-05
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Frame = +2
Query: 38 ASEIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPY-VC 214
A +K + L EL R M + +LS+LLY+ RF + +IAG P ++ + +
Sbjct: 57 AKILKTELKLRELYSRRTMNVIEAANLLSHLLYQNRFYLNPLGLLIAG--PINSKEFGIY 114
Query: 215 NMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISG 394
++D IG +E +D+ G+ G EA + P++ + + +AL + D SG
Sbjct: 115 SLDGIGAISEIKDYFAEGSGGVIALGTLEAEYNPDITVRDAIKLAEKALKSSIARDVFSG 174
Query: 395 WGAVVYII 418
+G +Y I
Sbjct: 175 YGIEIYTI 182
>UniRef50_Q9HR36 Cluster: Proteasome, subunit alpha; n=7;
Halobacteriaceae|Rep: Proteasome, subunit alpha -
Halobacterium salinarium (Halobacterium halobium)
Length = 255
Score = 46.4 bits (105), Expect = 4e-04
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYF-IEPVIAGLDPYDNTPYVCNMD 223
++ NLYE + M S M SNLL R GP+F + P++ G+D D+ +V ++D
Sbjct: 120 LRAEANLYEARRGEYMSIDALSTMASNLL---RGGPFFRVVPILGGVD--DDGGHVFSLD 174
Query: 224 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGA 403
G + + + G+ G+ E + +L + + + A+ A++ D SG G
Sbjct: 175 PAG-SSMSDTYTAQGSGMPYALGVLEQEYSEDLTMADAEQVAAHAVKSASERDTASGNGI 233
Query: 404 VVYIIEXDKIT 436
+ I D +T
Sbjct: 234 HITKITHDGLT 244
>UniRef50_Q9VNA5 Cluster: Probable proteasome subunit beta type-4;
n=3; Sophophora|Rep: Probable proteasome subunit beta
type-4 - Drosophila melanogaster (Fruit fly)
Length = 268
Score = 46.0 bits (104), Expect = 6e-04
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Frame = +2
Query: 80 ENRIMKPKTFSAMLSNLLYEK--RFGPYFIEPVIAGLDPYDNTPYVCNMDLIGCPNEPED 253
+N MKPK+ ++ ++ +LY + R P +I+ V+ G+D + TPY+ N+DL G ED
Sbjct: 128 DNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVD-NEGTPYLANVDLRG--RSYED 184
Query: 254 FVVS 265
+VV+
Sbjct: 185 YVVA 188
>UniRef50_Q9V0N9 Cluster: Proteasome subunit beta precursor; n=4;
Thermococcaceae|Rep: Proteasome subunit beta precursor -
Pyrococcus abyssi
Length = 207
Score = 45.6 bits (103), Expect = 8e-04
Identities = 32/131 (24%), Positives = 62/131 (47%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDL 226
++ LY + + M K + +L+N+L R PY ++ G +D P + ++D+
Sbjct: 69 LRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGG---FDEKPRLYSVDM 125
Query: 227 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAV 406
+G E + +V +G+ E Y + ++ + +LK E + +A+ A D SG G +
Sbjct: 126 MGGITE-DKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSGDGIM 184
Query: 407 VYIIEXDKITE 439
V I + E
Sbjct: 185 VVTITEEGYRE 195
>UniRef50_Q6CA23 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 238
Score = 45.2 bits (102), Expect = 0.001
Identities = 18/47 (38%), Positives = 31/47 (65%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLD 187
IK + LY + N+ +K ++ + + ++LY KRF PY++ +IAGLD
Sbjct: 93 IKQHVELYHYQNNKPLKVQSCARAIQHMLYNKRFFPYYVHTIIAGLD 139
>UniRef50_Q5KFP2 Cluster: Proteasome subunit beta type; n=3;
Fungi/Metazoa group|Rep: Proteasome subunit beta type -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 272
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = +2
Query: 32 NRASEIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYV 211
N +K R+ YE N+ M K+ + M+ +LY KRF PY++ ++ G++ D + V
Sbjct: 85 NFVKRVKQRLEWYEHAHNKAMGLKSIARMIQTMLYGKRFFPYYVYNILGGIEE-DGSGAV 143
Query: 212 CNMDLIG 232
+ D +G
Sbjct: 144 YSFDPVG 150
>UniRef50_A0RU86 Cluster: 20S proteasome, alpha and beta subunit;
n=1; Cenarchaeum symbiosum|Rep: 20S proteasome, alpha
and beta subunit - Cenarchaeum symbiosum
Length = 193
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/118 (22%), Positives = 58/118 (49%)
Frame = +2
Query: 86 RIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIGCPNEPEDFVVS 265
R + P + + M+SN++YE+RF P + ++ G+ P + +D +G P+++
Sbjct: 75 RDIPPNSVAKMMSNMMYERRFFPLLTQVIVGGV---VGEPAIYTLDSLGSV-LPDEYAAV 130
Query: 266 GTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVYIIEXDKITE 439
GT +E G+ + ++ + + + + + AA D+ SG G + ++ + E
Sbjct: 131 GTGAEMALGVLDPQFKSGMSEKDAVDLAVRGIRSAALRDSFSGDGLDILALDANGARE 188
>UniRef50_P40304 Cluster: Proteasome subunit beta type-1 precursor;
n=6; Endopterygota|Rep: Proteasome subunit beta type-1
precursor - Drosophila melanogaster (Fruit fly)
Length = 235
Score = 45.2 bits (102), Expect = 0.001
Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 12/151 (7%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDL 226
IK RM YE R M + + MLS +Y +RF PY++ ++AG+D + V + D
Sbjct: 88 IKVRMQSYEHTHLRTMTTEAVAQMLSIAMYNRRFFPYYVSNILAGID-NEGKGVVYSYDP 146
Query: 227 IG-CPNEPEDFVVSGTCSEQLYGMCE-ALWEPN----------LKPDELFETISQALVXA 370
IG C E + GT L + + + N L + S + A
Sbjct: 147 IGHC--EKATYRAGGTAGTLLQPVLDNQIGHKNMNLEDADKIKLTKERAVSVASDTFISA 204
Query: 371 AD*DAISGWGAVVYIIEXDKITEKHVQTRMD 463
A+ D +G ++ II D I + + R D
Sbjct: 205 AERDIYTGDSVLINIITKDGIEVRTLTLRQD 235
>UniRef50_A3DN21 Cluster: 20S proteasome, A and B subunits; n=1;
Staphylothermus marinus F1|Rep: 20S proteasome, A and B
subunits - Staphylothermus marinus (strain ATCC 43588 /
DSM 3639 / F1)
Length = 213
Score = 44.4 bits (100), Expect = 0.002
Identities = 31/114 (27%), Positives = 55/114 (48%)
Frame = +2
Query: 68 YELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIGCPNEP 247
YEL+ R ++ + + +LS +LY + P E V+ G D + P + +D +G E
Sbjct: 83 YELQLGREIRVRGLAKILSLILYSYKLAPLMTEVVVGGFD--EKGPQIYVLDPVGSLIE- 139
Query: 248 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVV 409
+ +V G+ G+ E + ++ DE + A+ A + DA+SG G V
Sbjct: 140 DKYVALGSGGPIALGIIEKEYREDIDVDEAEKLAVSAIREAIERDAVSGDGVDV 193
>UniRef50_Q980L4 Cluster: Proteasome subunit; n=4;
Sulfolobaceae|Rep: Proteasome subunit - Sulfolobus
solfataricus
Length = 196
Score = 44.0 bits (99), Expect = 0.002
Identities = 29/118 (24%), Positives = 61/118 (51%)
Frame = +2
Query: 68 YELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIGCPNEP 247
YE+ + + + +LS +LY+ + P+ E + G+D + P + +D IG E
Sbjct: 70 YEVSTGKPISVHAAAKLLSVILYQYKVMPFISEILFGGVD--EKGPQLYVLDPIGSLIE- 126
Query: 248 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVYIIE 421
+++ G+ + G+ E+ ++PN+ D + I++A+ + + D SG G + II+
Sbjct: 127 DNYAAVGSGARIAIGVLESEYDPNMSLDVATQLITKAIKASIERDITSGDGIDLAIID 184
>UniRef50_UPI0000498367 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 226
Score = 43.6 bits (98), Expect = 0.003
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Frame = +2
Query: 44 EIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMD 223
+IK + Y+ + + M ++ + +LSN LY RF PY+ ++AG++ N D
Sbjct: 86 QIKAHIKNYKYENGKEMSTESVAQVLSNTLYSHRFFPYYSFSLLAGINS-KGKAVTYNYD 144
Query: 224 LIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKP---DELFETISQALVXAAD*DAISG 394
+G E + SG+ E Y + ++L + +P E + A + D +G
Sbjct: 145 AVG-SFEERKYSCSGSGEELAYPLLDSLLKDRTEPLGEQEAINIARDVMTSACERDIHTG 203
Query: 395 WGAVVYIIEXDKITEK 442
+ I+ + I ++
Sbjct: 204 DNVEIVILNSNGIRKE 219
>UniRef50_A2BN24 Cluster: Proteasome beta subunit; n=2;
Desulfurococcales|Rep: Proteasome beta subunit -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 204
Score = 43.6 bits (98), Expect = 0.003
Identities = 28/128 (21%), Positives = 63/128 (49%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDL 226
++ + Y + R + + + +L+ +LY ++ P+ E ++ GL+ D T + MD
Sbjct: 67 LRAEIEYYNIVTGRRISVRAVARLLATILYSYKYYPFLSETLVGGLEA-DGTAKLYVMDP 125
Query: 227 IGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAV 406
+G E +D+ G+ + G+ E + ++ D+ + A+ A + DA+SG G
Sbjct: 126 LGSLIE-DDYAAIGSGAPIAIGILENGYSKDMSVDDAKKLAIAAVRAAIERDAMSGDGID 184
Query: 407 VYIIEXDK 430
+ +I ++
Sbjct: 185 LLVIRREE 192
>UniRef50_Q7QWS6 Cluster: Proteasome subunit beta type; n=1; Giardia
lamblia ATCC 50803|Rep: Proteasome subunit beta type -
Giardia lamblia ATCC 50803
Length = 254
Score = 41.9 bits (94), Expect = 0.010
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 4/143 (2%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDL 226
+K Y LK + + + F +LS ++Y +R P++ ++AG+D + V + D+
Sbjct: 114 MKIESTEYYLKTQKEIAIEQFIRLLSAMMYYRRSFPWYTSSIVAGIDS-EGRGAVYSYDV 172
Query: 227 IGCPNEPEDFVVSGTCSEQLYGMC-EALWEPN---LKPDELFETISQALVXAAD*DAISG 394
IG + +GT + + + EA+ N + + FE I A A+ D +G
Sbjct: 173 IGSTLRTR-YGSAGTGNAMICPILDEAILSKNEAEITREFAFELIQSAFRSCAERDIYTG 231
Query: 395 WGAVVYIIEXDKITEKHVQTRMD 463
V I D I E+ + R D
Sbjct: 232 DSVVAMCISADGIQERTFELRKD 254
>UniRef50_A3FQE7 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 246
Score = 41.5 bits (93), Expect = 0.013
Identities = 34/144 (23%), Positives = 66/144 (45%), Gaps = 8/144 (5%)
Frame = +2
Query: 56 RMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIGC 235
++ LYE + N+ + +LS +LY KRF PY+ +++GLD V D +G
Sbjct: 106 KVKLYEFEHNKTPSINAIAQLLSCILYSKRFFPYYSFCLLSGLDE-QGKGVVYGYDAVGS 164
Query: 236 PNEPEDFVVSGT--------CSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAIS 391
++ FV G+ Q+ G + +E ++ + + ++ A++ D +
Sbjct: 165 FDQ-HKFVALGSGGSLITSILDNQISGNNQTSFE-SIDKVGIINIVKDSITSASERDVHT 222
Query: 392 GWGAVVYIIEXDKITEKHVQTRMD 463
G A V +I+ I+ ++ R D
Sbjct: 223 GDSAEVIVIDSSGISVSSLRLRED 246
>UniRef50_Q9V247 Cluster: PsmB proteasome, subunit beta; n=4;
Thermococcaceae|Rep: PsmB proteasome, subunit beta -
Pyrococcus abyssi
Length = 197
Score = 40.7 bits (91), Expect = 0.022
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Frame = +2
Query: 68 YELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIGCPNEP 247
Y+ R M + + +LSN+L E ++ PY ++ +I G Y + P + N+D +G
Sbjct: 72 YQFTWGRPMTTRAMANLLSNILNENKWFPYLVQIIIGG---YVDEPTIANLDPLG-GLIF 127
Query: 248 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAV-VYIIEX 424
+D+ +G+ + + E + NL ++ E +A+ A D +G + V I
Sbjct: 128 DDYTATGSGTPFAIAILEEGYRKNLGIEKAKELAIKAVKAAGARDVYTGSKKIQVVTITK 187
Query: 425 DKITEKHV 448
D + E+ V
Sbjct: 188 DGMKEEFV 195
>UniRef50_Q9U794 Cluster: Proteasome subunit beta type-1; n=7;
Trypanosomatidae|Rep: Proteasome subunit beta type-1 -
Trypanosoma brucei brucei
Length = 258
Score = 40.7 bits (91), Expect = 0.022
Identities = 35/150 (23%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Frame = +2
Query: 47 IKFRMNLYELKEN-RIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVC-NM 220
+K+R+ Y+ ++ K + + S +LY++RF PY+ +I G+D + VC +
Sbjct: 112 LKYRIQWYQYNNGGKVPSTKAIAKLTSTMLYQRRFFPYYTFNMIVGID--EKGAGVCYSY 169
Query: 221 DLIGCPNEPEDFVVSGTCSEQLYGMCEALW---------EPNLKPDELFETISQALVXAA 373
D +G EP + G+ S + + + L +L +E + A AA
Sbjct: 170 DPVG-STEPFRYGTCGSASSFVEPLLDCLLTRQHMVTQAPADLTMEEALGMLKNAFTGAA 228
Query: 374 D*DAISGWGAVVYIIEXDKITEKHVQTRMD 463
+ D +G +II D + + + R D
Sbjct: 229 ERDIFTGDTVCFHIITADGVGTEMFELRKD 258
>UniRef50_Q41941 Cluster: Proteasome subunit RC5 like; n=2; core
eudicotyledons|Rep: Proteasome subunit RC5 like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 85
Score = 39.9 bits (89), Expect = 0.038
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLD 187
+K R +Y+ + N+ M + +LSN LY KRF PY+ V+ GLD
Sbjct: 3 LKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 49
>UniRef50_P42742 Cluster: Proteasome subunit beta type-1; n=7;
Viridiplantae|Rep: Proteasome subunit beta type-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 223
Score = 39.9 bits (89), Expect = 0.038
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLD 187
+K R +Y+ + N+ M + +LSN LY KRF PY+ V+ GLD
Sbjct: 74 LKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLD 120
>UniRef50_A0BPF5 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 239
Score = 39.5 bits (88), Expect = 0.051
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +2
Query: 56 RMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIG 232
R+ LYE + +T + +LS LY +RF PY+ ++AGLD +N V D IG
Sbjct: 98 RLQLYEFQNEVQASTETVAHLLSRELYSRRFFPYYTFNLLAGLDE-NNHGVVYGYDAIG 155
>UniRef50_A6R393 Cluster: Proteasome component C5; n=5;
Ascomycota|Rep: Proteasome component C5 - Ajellomyces
capsulatus NAm1
Length = 266
Score = 39.1 bits (87), Expect = 0.067
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +2
Query: 59 MNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLD 187
+ +Y+ K + M + L+ +LY KRF PY++ ++AG+D
Sbjct: 112 VKMYKYKHGKPMSVNACAQRLATILYSKRFFPYYVHAILAGMD 154
>UniRef50_O64464 Cluster: Proteasome subunit beta type-1; n=6; Oryza
sativa|Rep: Proteasome subunit beta type-1 - Oryza
sativa subsp. japonica (Rice)
Length = 221
Score = 39.1 bits (87), Expect = 0.067
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +2
Query: 65 LYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLD 187
LY+ + N+ M + +LSN LY KRF PY+ V+ GLD
Sbjct: 78 LYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLD 118
>UniRef50_UPI000150A719 Cluster: Proteasome A-type and B-type family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Proteasome A-type and B-type family protein -
Tetrahymena thermophila SB210
Length = 247
Score = 38.7 bits (86), Expect = 0.089
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +2
Query: 38 ASEIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCN 217
+ ++ R+++Y+ + + +++LS LY KRF PY+ ++AG D V N
Sbjct: 99 SKQLSARLHMYKYNNGKQANMRAIASLLSRTLYYKRFFPYYTFNLLAGFDD-KGEGLVIN 157
Query: 218 MDLIG 232
D +G
Sbjct: 158 YDAVG 162
>UniRef50_UPI0000E46471 Cluster: PREDICTED: similar to proteasome
subunit beta-type; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to proteasome subunit
beta-type - Strongylocentrotus purpuratus
Length = 104
Score = 37.9 bits (84), Expect = 0.15
Identities = 34/124 (27%), Positives = 55/124 (44%)
Frame = +2
Query: 92 MKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIGCPNEPEDFVVSGT 271
M +AMLS +LY +RF PY+ ++AGLD P + + IG N+ E +V
Sbjct: 1 MFTSAIAAMLSTILYYRRFFPYYTYNILAGLDEEGELPTISSG--IGGKNQ-EGWVK--- 54
Query: 272 CSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVYIIEXDKITEKHVQ 451
EP + D+ + + AA+ D +G G V++++ D E+
Sbjct: 55 -------------EP-IPVDKAVALVKDVFISAAERDIYTGDGIVLHVLTKDGCKEERFP 100
Query: 452 TRMD 463
R D
Sbjct: 101 LRRD 104
>UniRef50_Q08058 Cluster: Coenzyme Q-binding protein COQ10,
mitochondrial precursor; n=2; Saccharomyces
cerevisiae|Rep: Coenzyme Q-binding protein COQ10,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 207
Score = 37.9 bits (84), Expect = 0.15
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +2
Query: 56 RMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIGC 235
R Y L++ P T A +S + K F PY ++ + +P DN P + + +G
Sbjct: 42 REQRYVLRKAINAPPSTVYAAVSEVAQYKEFIPYCVDSFVDKRNPVDNKPLIAGL-RVGF 100
Query: 236 PNEPEDFVVSGTCSE 280
E+F+ + TC +
Sbjct: 101 KQYDEEFICNVTCKD 115
>UniRef50_A1R6Q7 Cluster: Putative 20S proteasome beta-subunit; n=1;
Arthrobacter aurescens TC1|Rep: Putative 20S proteasome
beta-subunit - Arthrobacter aurescens (strain TC1)
Length = 324
Score = 37.1 bits (82), Expect = 0.27
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +2
Query: 167 PVIAGLDPYDNTPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFET 346
P+ AG D + + D+ G E + G+ S G + LW+PNL ++
Sbjct: 203 PLFAGFDQVAGVGRLFSYDVTGGRYEELEHHSVGSGSVFARGALKKLWKPNLSEEDAISV 262
Query: 347 ISQALVXAAD*DAISG 394
+AL AAD D+ +G
Sbjct: 263 AVEALYDAADDDSATG 278
>UniRef50_Q9ZRY9 Cluster: 20S proteasome beta subunit; n=8;
Magnoliophyta|Rep: 20S proteasome beta subunit - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 238
Score = 37.1 bits (82), Expect = 0.27
Identities = 33/121 (27%), Positives = 57/121 (47%)
Frame = +2
Query: 56 RMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIGC 235
+ L+EL R + S +L+N+LY R + +IAG D + P + +D G
Sbjct: 83 KCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD--ETGPGLYYVDSEGG 140
Query: 236 PNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVYI 415
+ F V G+ S YG+ ++ ++ ++ +E E +A+ A D SG A VY
Sbjct: 141 RLKGTRFSV-GSGSPYAYGVLDSGYKYDMSIEEASELARRAIYHATFRDGASGGVASVYY 199
Query: 416 I 418
+
Sbjct: 200 V 200
>UniRef50_Q5B7I7 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 215
Score = 37.1 bits (82), Expect = 0.27
Identities = 23/88 (26%), Positives = 43/88 (48%)
Frame = +2
Query: 65 LYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIGCPNE 244
+Y+ + + + + + +S +LYEKRF PY ++ ++AG+D D + D GC E
Sbjct: 83 MYKYQHGKNIGLRACAQRVSTMLYEKRFFPYQLQTMVAGIDA-DGQGAIYYYDPAGC-IE 140
Query: 245 PEDFVVSGTCSEQLYGMCEALWEPNLKP 328
+G S + ++ P L+P
Sbjct: 141 KRSHCAAGEASSLMLPFLDS-QAPRLQP 167
>UniRef50_P28062 Cluster: Proteasome subunit beta type-8 precursor;
n=93; Metazoa|Rep: Proteasome subunit beta type-8
precursor - Homo sapiens (Human)
Length = 276
Score = 37.1 bits (82), Expect = 0.27
Identities = 30/121 (24%), Positives = 56/121 (46%)
Frame = +2
Query: 65 LYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIGCPNE 244
LY L+ + S +LSN++ + R + +I G D P + +D G
Sbjct: 137 LYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDK--KGPGLYYVDEHGTRLS 194
Query: 245 PEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVYIIEX 424
F +G+ + YG+ ++ + PNL P+E ++ +A+ A D+ SG +Y ++
Sbjct: 195 GNMFS-TGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSYSGGVVNMYHMKE 253
Query: 425 D 427
D
Sbjct: 254 D 254
>UniRef50_Q7R530 Cluster: Proteasome subunit beta type; n=1; Giardia
lamblia ATCC 50803|Rep: Proteasome subunit beta type -
Giardia lamblia ATCC 50803
Length = 191
Score = 36.7 bits (81), Expect = 0.36
Identities = 23/83 (27%), Positives = 36/83 (43%)
Frame = +2
Query: 194 DNTPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAA 373
DNT + C +IG ED+ +SG+ + G+ + L+ P L E + L A
Sbjct: 104 DNTGFHCINSMIGGSVLEEDYAISGSGGVFIKGLMKELYRPELTRTEAINLAHKLLKTAI 163
Query: 374 D*DAISGWGAVVYIIEXDKITEK 442
D SG +E D + E+
Sbjct: 164 SLDTKSGGFMRFVAVEQDGLAEE 186
>UniRef50_Q1ZXN1 Cluster: Proteasome subunit beta type; n=2;
Dictyostelium discoideum|Rep: Proteasome subunit beta
type - Dictyostelium discoideum AX4
Length = 236
Score = 36.7 bits (81), Expect = 0.36
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDL 226
+K + +E + + M + LSN LY KRF PY+ ++AG+D ++ D
Sbjct: 90 LKSMLESFEKEHGKPMSTPAIAQFLSNTLYYKRFFPYYTFNLVAGVDE-QGEGWIWTYDA 148
Query: 227 IG 232
+G
Sbjct: 149 VG 150
>UniRef50_A6R7Q1 Cluster: Proteasome component PRE3; n=1;
Ajellomyces capsulatus NAm1|Rep: Proteasome component
PRE3 - Ajellomyces capsulatus NAm1
Length = 174
Score = 36.7 bits (81), Expect = 0.36
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +2
Query: 248 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVYIIEXD 427
+ + + G+ S +YG C+A W + +E E + +L A D SG G + ++ +
Sbjct: 96 QSYAIGGSGSTYIYGYCDANWREGMTEEEGIEFVKNSLQEAIKWDGSSG-GVIRMVVLTE 154
Query: 428 KITEKHV 448
K +H+
Sbjct: 155 KGAVRHL 161
>UniRef50_O23717 Cluster: Proteasome subunit beta type-5-A
precursor; n=13; Viridiplantae|Rep: Proteasome subunit
beta type-5-A precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 274
Score = 36.7 bits (81), Expect = 0.36
Identities = 32/119 (26%), Positives = 57/119 (47%)
Frame = +2
Query: 56 RMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIGC 235
+ L+EL R + S +L+N+LY R + +IAG D + P + +D G
Sbjct: 119 KCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWD--ETGPGLYYVDNEGG 176
Query: 236 PNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVY 412
+ + F V G+ S YG+ ++ ++ ++ +E E +++ A D SG A VY
Sbjct: 177 RLKGDRFSV-GSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVY 234
>UniRef50_Q5CQ43 Cluster: Proteasome subunit beta type; n=2;
Cryptosporidium|Rep: Proteasome subunit beta type -
Cryptosporidium parvum Iowa II
Length = 290
Score = 36.3 bits (80), Expect = 0.47
Identities = 35/128 (27%), Positives = 60/128 (46%)
Frame = +2
Query: 65 LYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIGCPNE 244
LYEL+ + S M++N+ + R +IAG D + P++ +D G +
Sbjct: 144 LYELRNGERISVAGASKMITNIFFHYRAYDLSAGIMIAGFD--KDGPHLYYVDNEGSRVK 201
Query: 245 PEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVYIIEX 424
F V G+ S YG+ ++ + +L +E + +A+V A + D SG VY I
Sbjct: 202 DCKFSV-GSGSLYAYGVLDSGYRYDLTDEEAIDLGKRAIVIATNRDGGSGGLVRVYQINK 260
Query: 425 DKITEKHV 448
+ + KHV
Sbjct: 261 NGVI-KHV 267
>UniRef50_UPI0000499449 Cluster: proteasome beta subunit; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: proteasome beta
subunit - Entamoeba histolytica HM-1:IMSS
Length = 252
Score = 35.9 bits (79), Expect = 0.63
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Frame = +2
Query: 44 EIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNT-PYVCNM 220
E+ + L+EL+ + S ML+N+LY+ R + +I G YD T P++ +
Sbjct: 96 ELTRQCRLFELRNKPPISVAAASKMLANILYQYRNYNLSVGSMICG---YDKTGPHIFYV 152
Query: 221 DLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWG 400
+ G P G+ S + ++ ++ N+ ++ E +A+ A D SG
Sbjct: 153 E-DGGVRIPGHLFSVGSGSPYAVSLIDSEYDYNMPKEKAIELARRAIFHATHRDVASGGN 211
Query: 401 AVVYIIEXD 427
V I+ D
Sbjct: 212 VNVIFIDKD 220
>UniRef50_P23724 Cluster: Proteasome component C5; n=23;
Fungi/Metazoa group|Rep: Proteasome component C5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 241
Score = 35.9 bits (79), Expect = 0.63
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +2
Query: 119 LSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIG 232
+ +LLY KRF PY++ +IAGLD D V + D +G
Sbjct: 112 IQHLLYGKRFFPYYVHTIIAGLDE-DGKGAVYSFDPVG 148
>UniRef50_Q59PN5 Cluster: Putative uncharacterized protein; n=2;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 124
Score = 35.5 bits (78), Expect = 0.83
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = -2
Query: 204 GVLS*GSRPAITGSMKYGPNLFSYNKFDSIAEKVLGFIILFSFSSYKFILNL 49
G+LS PA G GPNL SYN + V G I+ S + YK +LNL
Sbjct: 3 GLLSLLLNPATMGLTNQGPNLLSYNDELTKFANVDGSILRSSRNLYKLVLNL 54
>UniRef50_Q4P203 Cluster: Proteasome subunit beta type; n=1;
Ustilago maydis|Rep: Proteasome subunit beta type -
Ustilago maydis (Smut fungus)
Length = 266
Score = 35.5 bits (78), Expect = 0.83
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +2
Query: 92 MKPKTFSAMLSNLLYEKR--FGPYFIEPVIAGLDPYDNTPYVCNMDLIG 232
+ P A L+ ++Y++R P + V+ G+DP D TP++ +DL+G
Sbjct: 123 LTPTQIYAYLARVMYQRRSKINPLWNSFVLGGVDPKDGTPFLGYVDLLG 171
>UniRef50_P34286 Cluster: Proteasome subunit beta type-1; n=2;
Caenorhabditis|Rep: Proteasome subunit beta type-1 -
Caenorhabditis elegans
Length = 258
Score = 35.5 bits (78), Expect = 0.83
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +2
Query: 47 IKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDL 226
++ R++ Y M + +LS LY +RF PY+ ++AG+D + V + D
Sbjct: 111 LQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHGKGA-VFSYDP 169
Query: 227 IGC 235
IGC
Sbjct: 170 IGC 172
>UniRef50_P28065 Cluster: Proteasome subunit beta type-9 precursor;
n=79; Eumetazoa|Rep: Proteasome subunit beta type-9
precursor - Homo sapiens (Human)
Length = 219
Score = 34.7 bits (76), Expect = 1.4
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 248 EDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVYII 418
+ F + G+ S +YG +A ++P + P+E + A+ A D S G V+Y++
Sbjct: 142 QPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSS--GGVIYLV 196
>UniRef50_Q8SRH6 Cluster: 20S PROTEASOME ALPHA-TYPE SUBUNIT; n=1;
Encephalitozoon cuniculi|Rep: 20S PROTEASOME ALPHA-TYPE
SUBUNIT - Encephalitozoon cuniculi
Length = 290
Score = 34.3 bits (75), Expect = 1.9
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Frame = +2
Query: 44 EIKFRMNLYELKENRI---MKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVC 214
E+ +M +YE+++ + + + + +LS +LY KRF PY+ V++G + PYV
Sbjct: 143 EVYVKM-VYEIRQYEVDDSINIHSAANLLSKILYSKRFFPYYSFCVLSGFE--KGKPYVY 199
Query: 215 NMDLIG 232
+ D IG
Sbjct: 200 SYDPIG 205
>UniRef50_Q6BWC7 Cluster: Similar to CA2356|IPF12282 Candida
albicans IPF12282 unknown function; n=1; Debaryomyces
hansenii|Rep: Similar to CA2356|IPF12282 Candida
albicans IPF12282 unknown function - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 1242
Score = 33.9 bits (74), Expect = 2.5
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +2
Query: 11 LVLH*HTNRASEIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDP 190
L+L T++ E + R+ Y+L + + TFS M+ L+ + RF ++ V L P
Sbjct: 489 LLLSVFTSKKEEYRERVVNYKLSDTKSKHQHTFSQMVFELIDDYRFVLIQVQLVHRILYP 548
Query: 191 YDNTPYVCNMDL 226
DNT V D+
Sbjct: 549 KDNTKKVSGQDI 560
>UniRef50_Q9USQ9 Cluster: Probable proteasome subunit beta type-4;
n=17; Ascomycota|Rep: Probable proteasome subunit beta
type-4 - Schizosaccharomyces pombe (Fission yeast)
Length = 262
Score = 33.9 bits (74), Expect = 2.5
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 92 MKPKTFSAMLSNLLYEKR--FGPYFIEPVIAGLDPYDNTPYVCNMDLIG 232
++P LS +LY +R PY+ + ++AG+D + PYV DL G
Sbjct: 118 LQPSYIHEYLSKVLYARRNKLDPYWNQLIVAGVDGENKEPYVAFADLRG 166
>UniRef50_Q7R9U3 Cluster: Proteasome subunit beta type; n=5;
Plasmodium|Rep: Proteasome subunit beta type -
Plasmodium yoelii yoelii
Length = 287
Score = 33.5 bits (73), Expect = 3.3
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 2/122 (1%)
Frame = +2
Query: 59 MNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIGCP 238
+ +YEL+ N + + S +LSN+LY+ + +++G YD+T + NM I
Sbjct: 122 IKIYELRNNEKISVRAASTILSNILYQYKGYGLCCGIILSG---YDHTGF--NMFYIDDE 176
Query: 239 NEPED--FVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVY 412
+ + G+ S Y + ++ ++ NL ++ E A+ A D SG V+
Sbjct: 177 GKKVEGNLFSCGSGSTYAYSILDSAYDYNLSVEQAVELGRNAIYHATFRDGGSGGKVRVF 236
Query: 413 II 418
I
Sbjct: 237 YI 238
>UniRef50_Q6FMY8 Cluster: Similar to sp|P14681 Saccharomyces
cerevisiae YGR040w KSS1; n=1; Candida glabrata|Rep:
Similar to sp|P14681 Saccharomyces cerevisiae YGR040w
KSS1 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 398
Score = 33.5 bits (73), Expect = 3.3
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -1
Query: 472 NILVHSRLDMFLCDFVL--FYDVDDGAPTRYGVSIG 371
NIL++S D+ +CDF L YD DD A T G ++G
Sbjct: 166 NILLNSNCDLKICDFGLARTYDPDDDASTMNGNNVG 201
>UniRef50_P22141 Cluster: Proteasome component C11; n=36;
Ascomycota|Rep: Proteasome component C11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 198
Score = 33.5 bits (73), Expect = 3.3
Identities = 26/136 (19%), Positives = 58/136 (42%), Gaps = 2/136 (1%)
Frame = +2
Query: 38 ASEIKFRMNLYELKENRIMKPKTFSAMLSNLLYE--KRFGPYFIEPVIAGLDPYDNTPYV 211
A I+ + LY ++E+ + P+ S+ + L + + PY + +I G D N P +
Sbjct: 57 AEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPEL 116
Query: 212 CNMDLIGCPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAIS 391
+D +G E + G + + + + P++ +E + + + +
Sbjct: 117 YQIDYLGTKVE-LPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMD 175
Query: 392 GWGAVVYIIEXDKITE 439
G +V I++ D I +
Sbjct: 176 FKGVIVKIVDKDGIRQ 191
>UniRef50_A5K9H5 Cluster: Proteasome subunit beta type; n=1;
Plasmodium vivax|Rep: Proteasome subunit beta type -
Plasmodium vivax
Length = 241
Score = 33.1 bits (72), Expect = 4.4
Identities = 31/148 (20%), Positives = 63/148 (42%), Gaps = 7/148 (4%)
Frame = +2
Query: 41 SEIKFRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNM 220
S +K ++ L+ L+ + +L +LY +RF PY+ ++AG+ D+ + N
Sbjct: 95 SLLKKKIELFVLEHAHYPDIHVIARLLCVILYSRRFFPYYTFNLLAGVS-NDSKGVLYNY 153
Query: 221 DLIGCPNE-PEDFVVSGTC------SEQLYGMCEALWEPNLKPDELFETISQALVXAAD* 379
D IG E V SG+ ++ + + N + + + A+ A +
Sbjct: 154 DAIGSYCEATHSCVGSGSALILPILDNRMEQKNQLIKNLNFNLRDDLDFVKDAITSATER 213
Query: 380 DAISGWGAVVYIIEXDKITEKHVQTRMD 463
D +G +YII+ + ++ + D
Sbjct: 214 DIYTGDSTEIYIIDQMGVNTTSLELKQD 241
>UniRef50_A2F716 Cluster: Proteasome subunit beta type; n=1;
Trichomonas vaginalis G3|Rep: Proteasome subunit beta
type - Trichomonas vaginalis G3
Length = 224
Score = 33.1 bits (72), Expect = 4.4
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 68 YELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLD 187
YE + M ++ + +SN LY KRF PY+I ++ G++
Sbjct: 86 YENQHFHEMSVESVARCVSNTLYSKRFFPYYINILVGGIN 125
>UniRef50_Q09544 Cluster: ATP synthase delta chain, mitochondrial
precursor; n=2; Caenorhabditis|Rep: ATP synthase delta
chain, mitochondrial precursor - Caenorhabditis elegans
Length = 163
Score = 32.7 bits (71), Expect = 5.8
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +2
Query: 254 FVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVV 409
FV SGT S + G C+ L E LK +E+ E+ ++A + AA SG G+ V
Sbjct: 91 FVSSGTLSVNIDGSCQVLAEEVLKVEEIDESAARAELDAA--QRASGEGSEV 140
>UniRef50_Q4WYZ1 Cluster: Fungal specific transcription factor,
putative; n=3; Trichocomaceae|Rep: Fungal specific
transcription factor, putative - Aspergillus fumigatus
(Sartorya fumigata)
Length = 786
Score = 32.3 bits (70), Expect = 7.7
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -2
Query: 231 PIKSILQTYGVLS*GSRPAITGSMKYGPNLFSYNKFDSIAEKVLGFIILF 82
P+ SI T G L+ GS ++ YG + FDS+A + LG +LF
Sbjct: 711 PMSSITSTSGELARGSDEFLSQLRSYGKSAPGNEHFDSLAMEALGESVLF 760
>UniRef50_A1L020 Cluster: RNA-binding protein MEX3A; n=19;
Euteleostomi|Rep: RNA-binding protein MEX3A - Homo
sapiens (Human)
Length = 520
Score = 32.3 bits (70), Expect = 7.7
Identities = 16/65 (24%), Positives = 28/65 (43%)
Frame = -2
Query: 399 PQPDMASQSAAXTKACEIVSKSSSGFRLGSQRASHIPYNCSEHVPDTTKSSGSLGQPIKS 220
PQP A + A+ K C + ++ + S +P SEHV + G + +++
Sbjct: 101 PQPPTAPKGASDAKLCALYKEAELRLKGSSNTTECVPVPTSEHVAEIVGRQGCKIKALRA 160
Query: 219 ILQTY 205
TY
Sbjct: 161 KTNTY 165
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,015,217
Number of Sequences: 1657284
Number of extensions: 10274719
Number of successful extensions: 25823
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 25098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25797
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36238783989
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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