Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_G19
(553 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0614 - 4599035-4599083,4599209-4599303,4599410-4599494,460... 163 6e-41
06_03_0903 - 25816395-25816493,25816695-25816779,25817390-258174... 162 2e-40
08_02_1353 + 26335306-26335448,26336025-26336106,26336322-263364... 40 0.001
09_04_0656 + 19267392-19267432,19267530-19267637,19269114-192691... 39 0.002
06_01_0387 - 2770387-2770514,2770963-2771063,2771152-2771255,277... 33 0.11
02_02_0522 - 11161385-11161537,11162513-11162668,11164176-111642... 31 0.46
07_01_1106 - 10187609-10190041,10190292-10191932 30 1.1
01_06_1596 - 38514278-38514346,38514547-38514705,38514776-385148... 29 2.5
02_05_0822 + 32025992-32026696,32027237-32027314,32027547-320277... 29 3.3
01_03_0185 - 13565903-13565932,13565933-13566013,13566104-135661... 28 4.3
11_06_0203 + 21186905-21187986,21189022-21189398,21189735-21189850 28 5.7
03_01_0398 + 3092577-3093857 28 5.7
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120... 27 7.5
04_04_0601 + 26532487-26532553,26532732-26532797,26533440-265335... 27 10.0
>02_01_0614 -
4599035-4599083,4599209-4599303,4599410-4599494,
4600107-4600196,4600772-4600879,4600983-4601197
Length = 213
Score = 163 bits (397), Expect = 6e-41
Identities = 73/137 (53%), Positives = 101/137 (73%)
Frame = +2
Query: 53 FRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIG 232
FR LY+L+E R MKP+ F++++S LLYEKRFGPYF +PVIAGL D P++C MD IG
Sbjct: 78 FRHKLYQLREERDMKPQAFASLVSALLYEKRFGPYFCQPVIAGLGDNDE-PFICTMDCIG 136
Query: 233 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVY 412
+DFVVSGT SE LYG CE++++P+++P+ELFETISQAL + D D +SGWG V
Sbjct: 137 AKELAKDFVVSGTASESLYGACESMYKPSMEPEELFETISQALQASVDRDCLSGWGGYVL 196
Query: 413 IIEXDKITEKHVQTRMD 463
++ ++ E+ ++ RMD
Sbjct: 197 LVTPTEVQERVIKGRMD 213
>06_03_0903 -
25816395-25816493,25816695-25816779,25817390-25817479,
25818566-25818673,25818771-25818952,25819032-25819216,
25820812-25820971
Length = 302
Score = 162 bits (393), Expect = 2e-40
Identities = 72/122 (59%), Positives = 94/122 (77%)
Frame = +2
Query: 53 FRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIG 232
FR LY+L+E R MKP+TF++++S LLYEKRFGPYF +PVIAGL DN P++C MD IG
Sbjct: 182 FRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGE-DNEPFICTMDCIG 240
Query: 233 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVY 412
+DFVVSGT SE LYG CE++++PN++P+ELFETISQAL + D D +SGWG V
Sbjct: 241 AKELAKDFVVSGTASESLYGACESMYKPNMEPEELFETISQALQSSVDRDCLSGWGGFVL 300
Query: 413 II 418
++
Sbjct: 301 LV 302
>08_02_1353 +
26335306-26335448,26336025-26336106,26336322-26336451,
26336486-26336548,26336549-26336691,26336827-26336913,
26337014-26337088
Length = 240
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +2
Query: 65 LYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLD 187
LYE N+ M + +LSN LY KRF PY+ V+ GLD
Sbjct: 76 LYEHNHNKKMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLD 116
>09_04_0656 +
19267392-19267432,19267530-19267637,19269114-19269195,
19269637-19269766,19269882-19270024,19270198-19270284,
19270384-19270458
Length = 221
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +2
Query: 65 LYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLD 187
LY+ + N+ M + +LSN LY KRF PY+ V+ GLD
Sbjct: 78 LYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLD 118
>06_01_0387 -
2770387-2770514,2770963-2771063,2771152-2771255,
2771345-2771507,2771550-2771596,2772818-2772946
Length = 223
Score = 33.5 bits (73), Expect = 0.11
Identities = 34/120 (28%), Positives = 52/120 (43%)
Frame = +2
Query: 53 FRMNLYELKENRIMKPKTFSAMLSNLLYEKRFGPYFIEPVIAGLDPYDNTPYVCNMDLIG 232
F+ L+EL R + S +L+N+LY R I +IAG D + P + +D G
Sbjct: 67 FQCRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWD--EKGPGLYYVDSEG 124
Query: 233 CPNEPEDFVVSGTCSEQLYGMCEALWEPNLKPDELFETISQALVXAAD*DAISGWGAVVY 412
F V G+ S YG+ + + + +E E +A+ A D SG VY
Sbjct: 125 ARLMGSRFSV-GSGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCVSVY 183
>02_02_0522 -
11161385-11161537,11162513-11162668,11164176-11164298,
11164404-11164466,11164512-11164577,11165128-11165232,
11165336-11165435,11165520-11165590,11166037-11166093,
11167215-11167292,11167367-11167441,11168490-11168540,
11169015-11169094,11169560-11169660,11169749-11169810,
11170084-11170590
Length = 615
Score = 31.5 bits (68), Expect = 0.46
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 341 ETISQALVXAAD*DAISGWGAVVYIIEXDKITEK 442
E+I L+ AAD D + +VYI E DKIT+K
Sbjct: 259 ESILYKLLAAADFDVAAAQQGIVYIDEVDKITKK 292
>07_01_1106 - 10187609-10190041,10190292-10191932
Length = 1357
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = -1
Query: 328 GLQIGFPEGFTHSVQ--LFRACSRHYKILGLIGATD-QIHITNIWSVIVRIKTSYHWFNE 158
G + F G + + + LF R IL +G +D Q+HI ++ ++VR++T F +
Sbjct: 149 GDMVSFYRGASEATRDRLFIHSKRRMHILPTLGYSDPQVHINRLFQLLVRVRTMVSSFGK 208
Query: 157 IWSES 143
S S
Sbjct: 209 SGSPS 213
>01_06_1596 -
38514278-38514346,38514547-38514705,38514776-38514898,
38514985-38515047,38515248-38515352,38515487-38515586,
38515716-38515786,38516329-38516385,38516830-38516907,
38516975-38517049,38517180-38517230,38517453-38517466,
38517516-38517616,38517703-38517764,38518346-38518372,
38518901-38519581
Length = 611
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 341 ETISQALVXAAD*DAISGWGAVVYIIEXDKITEK 442
E+I Q L+ AA+ + + +VYI E DKIT+K
Sbjct: 304 ESILQKLLVAAEYNVQAAQQGIVYIDEVDKITKK 337
>02_05_0822 +
32025992-32026696,32027237-32027314,32027547-32027713,
32027811-32027885,32028624-32028742,32028908-32029204,
32029275-32029362,32029467-32029572,32029727-32029837,
32030520-32030683,32031237-32031357,32031958-32032182,
32032267-32032457,32032658-32032825,32032911-32033016,
32033301-32033438,32033533-32033697,32033777-32033980,
32034341-32034535,32034603-32034674,32034797-32034949
Length = 1215
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 487 HISYKNILVHSRLDMFLCDFVLFYDVDD 404
HI +N+++H L +F L+Y V D
Sbjct: 604 HIQQRNLILHGSWKWLLTEFALYYGVSD 631
>01_03_0185 -
13565903-13565932,13565933-13566013,13566104-13566175,
13566800-13566932,13567068-13567107,13567192-13567258,
13567453-13567719
Length = 229
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 182 LDPYDNTPYVCNMDLIGCPNEPEDFVVSGTCSEQLYGMCEA 304
LD ++ +D+ PN+ E+ + C QLYG+ EA
Sbjct: 123 LDRFEEGAEQFRLDVAANPNDTEESIWCFLCEAQLYGVDEA 163
>11_06_0203 + 21186905-21187986,21189022-21189398,21189735-21189850
Length = 524
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/73 (21%), Positives = 35/73 (47%)
Frame = -2
Query: 237 GQPIKSILQTYGVLS*GSRPAITGSMKYGPNLFSYNKFDSIAEKVLGFIILFSFSSYKFI 58
G+P+++I +G+ G P + + + N + + S+ E+ GF++ F +
Sbjct: 20 GRPLETIEAYFGLREAGGLPNVVSACAFF-NACAGAMYLSLGEQFHGFVVKCGFEMDVSV 78
Query: 57 LNLISEARFVCQC 19
LN + + C+C
Sbjct: 79 LNSMVDFYGKCRC 91
>03_01_0398 + 3092577-3093857
Length = 426
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 218 MDLIGCPNEPEDFVVSGTCSEQLY 289
++L P++P DFVVSG+ S++ +
Sbjct: 146 LNLCASPSDPADFVVSGSWSDKAF 169
>07_01_0172 -
1201595-1201912,1202637-1202723,1202836-1202895,
1203007-1203106,1203227-1203633,1204728-1204883,
1204981-1205106,1205503-1205572,1205679-1205767
Length = 470
Score = 27.5 bits (58), Expect = 7.5
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = -2
Query: 360 KACEIVSKSSSGFRLGSQRASHIPYNCSEHVPDTTKSSGSLGQPIKSILQTYGVL 196
K + S+ + FR+ Q+ PYN VP ++ L + ++ +LQTY ++
Sbjct: 232 KEATLDSRLINPFRVEGQKEFSGPYNTMVEVPSISRDRRRL-REVEDLLQTYKLI 285
>04_04_0601 +
26532487-26532553,26532732-26532797,26533440-26533566,
26533861-26533975,26534377-26534436
Length = 144
Score = 27.1 bits (57), Expect = 10.0
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +2
Query: 161 IEPVIAGLDPYDNTPYVCNMD---LIGC-PNEPEDFVVSGTCSE 280
+E ++ G +NT Y+CNMD ++ C E + V SG S+
Sbjct: 6 LEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSD 49
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,486,340
Number of Sequences: 37544
Number of extensions: 269155
Number of successful extensions: 601
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1245816180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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