Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_G17
         (541 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92804-1|CAB07252.1|  338|Caenorhabditis elegans Hypothetical pr...    31   0.70 
Z49966-5|CAA90245.1|  445|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AF106577-8|AAC78184.1|  288|Caenorhabditis elegans Hypothetical ...    27   6.5  
Z81512-4|CAB04170.1|  550|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AF067936-2|AAC19213.1|  527|Caenorhabditis elegans Hypothetical ...    27   8.6  

>Z92804-1|CAB07252.1|  338|Caenorhabditis elegans Hypothetical
           protein K05D4.2 protein.
          Length = 338

 Score = 30.7 bits (66), Expect = 0.70
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -1

Query: 277 FIYNYLVHNIVKKNL*RFSL*EKNIFILVYCQNFIIWINPCFV 149
           F Y Y+     KK L RFSL    ++IL+   NF IW   C++
Sbjct: 113 FYYRYICVACPKKLL-RFSLRNCFLWILLVLSNFSIWFYCCYI 154


>Z49966-5|CAA90245.1|  445|Caenorhabditis elegans Hypothetical
           protein F35C11.5 protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 494 IFFCLNSFLIVHYSETFAVEKTE 426
           IF C NSFL++++ E+F   K E
Sbjct: 49  IFVCCNSFLLLNFVESFLFYKKE 71


>AF106577-8|AAC78184.1|  288|Caenorhabditis elegans Hypothetical
           protein F46F5.4 protein.
          Length = 288

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 410 HNSRWPPFFQQRMFQNNEQLRKSLNK 487
           HNS W   +  R+  NNE+++KSL++
Sbjct: 243 HNSTWN--YDARLLGNNEEIQKSLHR 266


>Z81512-4|CAB04170.1|  550|Caenorhabditis elegans Hypothetical
           protein F25C8.4 protein.
          Length = 550

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +2

Query: 338 KTILDRWIHEFYKFREHSLWSAIIHNSRWPPFFQQRMFQNNEQLRKSL 481
           KT  D   HE+ KFRE     A+I N  +  F  Q + Q  + + KSL
Sbjct: 15  KTFHDFLFHEWEKFRED---VALIDNDTFAQFTFQDVMQKADFIAKSL 59


>AF067936-2|AAC19213.1|  527|Caenorhabditis elegans Hypothetical
           protein C24G6.6 protein.
          Length = 527

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 115 DNSFFYITNCRLQNKDLSRL*NFDNKLK*KYFSL 216
           DN+ F   N  +Q KD+    +F +KL  KY S+
Sbjct: 116 DNAHFAFGNQNVQEKDIKTFLDFTSKLDPKYRSI 149


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,892,728
Number of Sequences: 27780
Number of extensions: 254811
Number of successful extensions: 557
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)