Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_G17
         (541 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    24   1.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    24   1.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.0  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   3.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   4.6  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   8.1  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 326 RNFLKTILDRWIHEFY 373
           R F +T+LD+ +H FY
Sbjct: 48  RGFPRTVLDKEVHVFY 63


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 326 RNFLKTILDRWIHEFY 373
           R F +T+LD+ +H FY
Sbjct: 48  RGFPRTVLDKEVHVFY 63


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -3

Query: 455 SETFAVEKTEAILNCV*WPTTANVLEICKTHESNGRE 345
           ++ +A+    AIL CV     A+ +++   H   G E
Sbjct: 110 NKEYAIRGNSAILKCVVPSFVADFVKVLSWHTDQGEE 146


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 11/50 (22%), Positives = 25/50 (50%)
 Frame = +1

Query: 211 SLTTKTVTNFFSQYYVLNNYK*TVVYTNGNESLSTVHLT*LFKNNSRPLD 360
           SLT + + +  +  Y+++N    ++Y N ++S   +    L  N+ +  D
Sbjct: 189 SLTVQAMDSTNTMVYMVDNKNTLIIYQNADDSFHRLSSHTLNHNSDKMSD 238


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 374 CKTHESNGRELFLKS 330
           C T++SNG E+ L++
Sbjct: 153 CSTYQSNGEEVCLEN 167


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 216 HNENRYKFFFTILCTK 263
           HN N YK+ +   C K
Sbjct: 91  HNNNNYKYNYNNNCKK 106


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,610
Number of Sequences: 438
Number of extensions: 3209
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)