Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_G14
(641 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical ... 29 2.8
AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical ... 29 2.8
Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 27 8.6
Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue... 27 8.6
U97190-7|AAF23185.1| 650|Caenorhabditis elegans Related to yeas... 27 8.6
U97190-6|AAV58893.1| 716|Caenorhabditis elegans Related to yeas... 27 8.6
U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeas... 27 8.6
U97190-4|AAV58894.1| 720|Caenorhabditis elegans Related to yeas... 27 8.6
U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeas... 27 8.6
U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical pr... 27 8.6
U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical pr... 27 8.6
>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
F32H2.5 protein.
Length = 2586
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 254 IGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDTHIPGFGD 376
IG +DL+ LG A LDNV+ HG+ L P GD
Sbjct: 1832 IGKVDLSQNSSLGMAKL---LDNVSVHGILLDSIMDPTVGD 1869
>AF067937-7|AAN84819.1| 392|Caenorhabditis elegans Hypothetical
protein F22F7.1b protein.
Length = 392
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 206 GVKVPFAGNDKNIVSAIGSLDLTNRQ 283
GV VPF G DK+I++ D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262
>AF067937-6|AAF99915.1| 426|Caenorhabditis elegans Hypothetical
protein F22F7.1a protein.
Length = 426
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 206 GVKVPFAGNDKNIVSAIGSLDLTNRQ 283
GV VPF G DK+I++ D T+RQ
Sbjct: 237 GVAVPFPGADKSIINRSQYYDATSRQ 262
>Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical
protein T01G9.3 protein.
Length = 603
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 398 VNLFHNDYHDITAKAFATRNMPDIANVPNFNTVGGGIDYMFKDKIGASATAAHTD--FIH 571
++L HN +ITA AF N+ + + N +G D F + + H D F H
Sbjct: 261 LDLSHNSIQEITACAFCNTNISKLD--LSHNLLGISKDSPFNEDAFRTMPLRHLDLSFNH 318
Query: 572 RNDY 583
ND+
Sbjct: 319 MNDF 322
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -3
Query: 318 SSATPAVAAPSFCLLVKSKEPIALTIFLSLPAKGTLTPAPEVPSELS--VRAPCASLRTL 145
+SATPAV AP+ + V PI T+ + L P P E++ V AP + +
Sbjct: 534 TSATPAVTAPASIVPVTPTAPIVETLIVP-----PLPPVESNPEEVTPMVTAPISIHSSF 588
Query: 144 ELVNSSGSS 118
E ++S S
Sbjct: 589 ENISSDFES 597
>Y12543-1|CAA73142.1| 897|Caenorhabditis elegans VPS34 homologue
protein.
Length = 897
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2
Query: 622 VRTLEEVQLSVQGVIVTMNEVRVSGGR 542
V +L + Q+ V+ +I+ MNE + GGR
Sbjct: 538 VDSLHQQQIFVEDLIILMNEAKARGGR 564
>U97190-7|AAF23185.1| 650|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform b
protein.
Length = 650
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2
Query: 622 VRTLEEVQLSVQGVIVTMNEVRVSGGR 542
V +L + Q+ V+ +I+ MNE + GGR
Sbjct: 291 VDSLHQQQIFVEDLIILMNEAKARGGR 317
>U97190-6|AAV58893.1| 716|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform d
protein.
Length = 716
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2
Query: 622 VRTLEEVQLSVQGVIVTMNEVRVSGGR 542
V +L + Q+ V+ +I+ MNE + GGR
Sbjct: 538 VDSLHQQQIFVEDLIILMNEAKARGGR 564
>U97190-5|AAV34807.1| 897|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform c
protein.
Length = 897
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2
Query: 622 VRTLEEVQLSVQGVIVTMNEVRVSGGR 542
V +L + Q+ V+ +I+ MNE + GGR
Sbjct: 538 VDSLHQQQIFVEDLIILMNEAKARGGR 564
>U97190-4|AAV58894.1| 720|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform e
protein.
Length = 720
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2
Query: 622 VRTLEEVQLSVQGVIVTMNEVRVSGGR 542
V +L + Q+ V+ +I+ MNE + GGR
Sbjct: 542 VDSLHQQQIFVEDLIILMNEAKARGGR 568
>U97190-3|AAF23184.1| 901|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 34, isoform a
protein.
Length = 901
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -2
Query: 622 VRTLEEVQLSVQGVIVTMNEVRVSGGR 542
V +L + Q+ V+ +I+ MNE + GGR
Sbjct: 542 VDSLHQQQIFVEDLIILMNEAKARGGR 568
>U13644-7|AAM48536.2| 700|Caenorhabditis elegans Hypothetical
protein F56D2.6b protein.
Length = 700
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 102 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 242
T+ + LNY QA+ G TEL PL +L L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525
>U13644-6|AAB52678.1| 739|Caenorhabditis elegans Hypothetical
protein F56D2.6a protein.
Length = 739
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 102 TIFNTMRSLNY*QALESAGTRTELSRSTPMVPLVLELKYPLLVTTRI 242
T+ + LNY QA+ G TEL PL +L L+ +T +
Sbjct: 479 TLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTEL 525
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,750,997
Number of Sequences: 27780
Number of extensions: 316250
Number of successful extensions: 887
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 887
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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