Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_G12
(249 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 23 0.43
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 3.1
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 20 4.0
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 20 4.0
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 20 4.0
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 20 5.3
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 20 5.3
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 19 7.1
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 19 7.1
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 19 9.3
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 19 9.3
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 19 9.3
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 23.4 bits (48), Expect = 0.43
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -2
Query: 227 VDLKNNNGVGHFVSHLVEFGPDHLAGSAPSRH 132
+D +++G+ H PDH +PS H
Sbjct: 23 LDNNDSSGIPHSAESSASNSPDHYERFSPSTH 54
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 20.6 bits (41), Expect = 3.1
Identities = 10/29 (34%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Frame = -3
Query: 139 VAMKSITTSL---SPASDSLVFKSSKSLM 62
+A+ +T +L SP+S++L + +++SLM
Sbjct: 255 MALSPVTHNLYYNSPSSENLYYVNTESLM 283
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 20.2 bits (40), Expect = 4.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 51 MSIHIKDFDDLKTRLSEAGDKLVVID 128
M +++ DL TR+S A D V+D
Sbjct: 319 MQKYVQMIHDLHTRISTAIDLGYVVD 344
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 20.2 bits (40), Expect = 4.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 51 MSIHIKDFDDLKTRLSEAGDKLVVID 128
M +++ DL TR+S A D V+D
Sbjct: 319 MQKYVQMIHDLHTRISTAIDLGYVVD 344
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.2 bits (40), Expect = 4.0
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 48 KMSIHIKDFDDLKTRLS 98
K + ++DD+KT LS
Sbjct: 293 KKEVEDMEYDDIKTELS 309
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 19.8 bits (39), Expect = 5.3
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 6 VLPGRFYCFPI*RYKMSIHIKDF--DDL 83
V P F CF + + + +HI D DDL
Sbjct: 411 VFPVCFVCFNLMYWIIYLHISDVVADDL 438
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 19.8 bits (39), Expect = 5.3
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +3
Query: 6 VLPGRFYCFPI*RYKMSIHIKDF--DDL 83
V P F CF + + + +HI D DDL
Sbjct: 411 VFPVCFVCFNLMYWIIYLHISDVVADDL 438
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 19.4 bits (38), Expect = 7.1
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +3
Query: 45 YKMSIHIKDFDDLKTRLSEAGDKLVV 122
++++ + D+D T+L+ AG+ V
Sbjct: 227 HRLTSNTFDYDPRYTKLTVAGESFTV 252
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 19.4 bits (38), Expect = 7.1
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +1
Query: 1 RVFYPVDFIVF 33
R+ +PV FI+F
Sbjct: 449 RIVFPVAFIIF 459
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 19.0 bits (37), Expect = 9.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 45 YKMSIHIKDFD 77
+K+ H KDFD
Sbjct: 112 FKLFYHAKDFD 122
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 19.0 bits (37), Expect = 9.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +3
Query: 45 YKMSIHIKDFD 77
+K+ H KDFD
Sbjct: 112 FKLFYHAKDFD 122
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 19.0 bits (37), Expect = 9.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 169 PNSTRWLTKCPTPLLFLRSTL 231
PN WL K T L ++ TL
Sbjct: 139 PNHYLWLYKDKTILYMVKLTL 159
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,528
Number of Sequences: 438
Number of extensions: 1348
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used: 4401495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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