Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_G09
         (684 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   4.7  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   4.7  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   6.3  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    22   6.3  

>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -3

Query: 574 LLITMLSIYTLCNTRIHCG 518
           +L+++L    +C+  +HCG
Sbjct: 5   ILLSLLITCLICSPSVHCG 23


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 77  LEQNSSPSDIATELPVEEA*LITLLVVL 160
           L+Q   P DIA     E+  L+TL V L
Sbjct: 163 LKQVKIPHDIAVNTTTEKGALVTLSVQL 190


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 592 NSINIMFDLQENSIFFIVLYYI 657
           +SI+I F L     FF++ YYI
Sbjct: 219 SSISITFKLAREMGFFMMDYYI 240


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 213 WLLGVYLCDVAMFV 172
           W+LGV LC +  +V
Sbjct: 107 WVLGVSLCKIRAYV 120


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,597
Number of Sequences: 438
Number of extensions: 3731
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)