Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_G02
         (581 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    25   0.54 
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    24   0.95 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    24   0.95 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   8.9  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    21   8.9  

>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 477 KMFIRILCIILMFKKRKSSRNSWQISYHN 563
           K+F++ L  ILM ++ K +R  W +   N
Sbjct: 336 KIFLKYLPTILMMRRPKKTRLRWMMEIPN 364


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 13/49 (26%), Positives = 19/49 (38%)
 Frame = +1

Query: 196 KNGSRDYGLFQINDKYWCSTGSTPGKDCHVTCNQLLTDDLRGLLRKKLQ 342
           K     Y +  + DKY   +G      CH  C   L  D+  L   ++Q
Sbjct: 454 KKNPNVYKVETVGDKYMAVSGLPEPCRCHARCIARLALDMMDLAADEVQ 502


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 13/49 (26%), Positives = 19/49 (38%)
 Frame = +1

Query: 196 KNGSRDYGLFQINDKYWCSTGSTPGKDCHVTCNQLLTDDLRGLLRKKLQ 342
           K     Y +  + DKY   +G      CH  C   L  D+  L   ++Q
Sbjct: 454 KKNPNVYKVETVGDKYMAVSGLPEPCRCHARCIARLALDMMDLAADEVQ 502


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 230 IWKRP*SRDPFLFTLPICRYRPLR 159
           +++R     P L  L + R+RPLR
Sbjct: 109 VFERTEPLSPHLLNLEVERWRPLR 132


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 172 YRQIGKVNKNGSRD 213
           YR+ GK +K  SRD
Sbjct: 278 YRKYGKTSKERSRD 291


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,398
Number of Sequences: 438
Number of extensions: 3735
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)