Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_F20
         (562 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...    99   2e-21
AF022981-4|AAG24205.1|  602|Caenorhabditis elegans Hypothetical ...    33   0.14 
Z82265-1|CAB05172.1|  116|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AF067936-5|AAC19211.1|  430|Caenorhabditis elegans Hypothetical ...    27   7.0  
AF067936-4|AAC19210.1|  903|Caenorhabditis elegans Hypothetical ...    27   7.0  
Z48230-1|CAA88262.2|  587|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U46673-3|AAC48151.1|  506|Caenorhabditis elegans Aldehyde dehydr...    27   9.2  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score = 99.1 bits (236), Expect = 2e-21
 Identities = 42/63 (66%), Positives = 51/63 (80%)
 Frame = +1

Query: 370 QELWNMPFAFCTREKQPWCEFAESAEEGPTTRFLRELAVKYAMVIVSSILERDEKHADIL 549
           QE W MPFAFCTRE+ PW EFAES   GPTT+FL +LAVK+ +VI+S ILERDE+  D++
Sbjct: 120 QEAWTMPFAFCTRERLPWTEFAESVYTGPTTQFLSKLAVKHDIVIISPILERDEEKDDVI 179

Query: 550 WNT 558
           WNT
Sbjct: 180 WNT 182



 Score = 63.7 bits (148), Expect = 9e-11
 Identities = 37/117 (31%), Positives = 56/117 (47%)
 Frame = +2

Query: 41  LEAIVNNNLSGKDLEEFNRIYYGRKDHFEIKLKDTSXXXXXXXXXXXXXXXFPAKKEQTR 220
           +E  +   L G  L+E  RI YGR  +  +++   +                 A+KEQTR
Sbjct: 11  VETALAEKLDGVSLDEVERILYGRP-YRALEISSIAEKLAQDGDFQLSGYIVDAQKEQTR 69

Query: 221 PPRIVKVGIIQHSIAIPTDRPINEQKKAIFDKVKKIIDVAGQEGVNIICFKNYGTCP 391
            PR+V+V  IQ+ I  PT   + EQ+ AI  +V  +I+ A   G N+I  +   T P
Sbjct: 70  APRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMP 126


>AF022981-4|AAG24205.1|  602|Caenorhabditis elegans Hypothetical
           protein W03F9.10 protein.
          Length = 602

 Score = 33.1 bits (72), Expect = 0.14
 Identities = 25/89 (28%), Positives = 35/89 (39%)
 Frame = +2

Query: 56  NNNLSGKDLEEFNRIYYGRKDHFEIKLKDTSXXXXXXXXXXXXXXXFPAKKEQTRPPRIV 235
           N NLS K+L+E  R     K     K K++                 P K+E+      V
Sbjct: 14  NKNLSKKELQELKR-----KQQKSKKKKESKKRAKATKQAEIETREEPKKEEENGDDLDV 68

Query: 236 KVGIIQHSIAIPTDRPINEQKKAIFDKVK 322
           ++  I  +I I  D P  +   AIFD  K
Sbjct: 69  EIDYIGETIEIEPDNPHAQYFSAIFDAFK 97


>Z82265-1|CAB05172.1|  116|Caenorhabditis elegans Hypothetical
           protein F02H6.3a protein.
          Length = 116

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
 Frame = -3

Query: 71  HLSCC*RSLQGFGFRGP--CLLVCY 3
           +L CC RSL+   FRGP  CL+  Y
Sbjct: 92  YLKCCLRSLKKIKFRGPLNCLVQTY 116


>AF067936-5|AAC19211.1|  430|Caenorhabditis elegans Hypothetical
           protein C24G6.2b protein.
          Length = 430

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +1

Query: 400 CTREKQPWCEFAESAEEGPTTRFLRELAVKYAM 498
           C  E +P C   E  + G   +FLRE   KY M
Sbjct: 154 CVTESEPLCLVVEYCDNGDLLKFLRE-RCKYMM 185


>AF067936-4|AAC19210.1|  903|Caenorhabditis elegans Hypothetical
           protein C24G6.2a protein.
          Length = 903

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +1

Query: 400 CTREKQPWCEFAESAEEGPTTRFLRELAVKYAM 498
           C  E +P C   E  + G   +FLRE   KY M
Sbjct: 627 CVTESEPLCLVVEYCDNGDLLKFLRE-RCKYMM 658


>Z48230-1|CAA88262.2|  587|Caenorhabditis elegans Hypothetical
           protein F42G10.1 protein.
          Length = 587

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -2

Query: 528 VPLEDRRHDYHGVFDSQLTEKACSRSFLGRFSE 430
           +P+  R H YHG+FD        +   + +FSE
Sbjct: 155 IPISTRNHFYHGLFDEIRDIHILNIRTMSKFSE 187


>U46673-3|AAC48151.1|  506|Caenorhabditis elegans Aldehyde
           dehydrogenase protein 10 protein.
          Length = 506

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +2

Query: 299 KAIFDKVKKIIDVAGQEGVNIIC 367
           K  ++KVK  I++A +EG +I+C
Sbjct: 350 KVHYEKVKSYIELAKKEGADILC 372


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,498,125
Number of Sequences: 27780
Number of extensions: 284290
Number of successful extensions: 744
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)