Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_F19
(601 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 122 1e-28
Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical pr... 31 0.83
Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical ... 28 5.9
AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical ... 28 5.9
AF067936-5|AAC19211.1| 430|Caenorhabditis elegans Hypothetical ... 27 7.7
AF067936-4|AAC19210.1| 903|Caenorhabditis elegans Hypothetical ... 27 7.7
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 122 bits (295), Expect = 1e-28
Identities = 53/80 (66%), Positives = 64/80 (80%)
Frame = +2
Query: 362 ELWNMPFAFCTREKQPWCEFAESAEEGPTTRFLRELAVKYAMVIVSSILERDEKHADILW 541
E W MPFAFCTRE+ PW EFAES GPTT+FL +LAVK+ +VI+S ILERDE+ D++W
Sbjct: 121 EAWTMPFAFCTRERLPWTEFAESVYTGPTTQFLSKLAVKHDIVIISPILERDEEKDDVIW 180
Query: 542 NTTVIISDTGNVIGKHRKNH 601
NT V+IS TG VIG+ RKNH
Sbjct: 181 NTAVVISHTGRVIGRSRKNH 200
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +3
Query: 147 KEADFEIAAYAFPAKKGANPPSEDR*VGIIQHSIAIPTDRPINEQKKAIFDKVKKIIDVA 326
++ DF+++ Y A+K V IQ+ I PT + EQ+ AI +V +I+ A
Sbjct: 50 QDGDFQLSGYIVDAQKEQTRAPRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAA 109
Query: 327 GQEGVNII 350
G N+I
Sbjct: 110 ASAGANVI 117
>Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical
protein C37A5.1 protein.
Length = 512
Score = 30.7 bits (66), Expect = 0.83
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -2
Query: 591 RCFPITFPVSLIITVVFQRMSACFSSLSRIEDT 493
+C P+TF ++ +T++ R F+++ IE+T
Sbjct: 75 KCVPLTFMLAFFVTIIVDRWKNMFANIGFIENT 107
>Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 27.9 bits (59), Expect = 5.9
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 72 RSSTGFIMDGKTISKSIKRYINCRCKEADFEIAAYAFPAKKGANPPSEDR*VGIIQHSIA 251
R +GF D K ISK + Y++ K D P+K NP S++ +G + HS A
Sbjct: 510 RLYSGFNTDDKGISKVMMHYVSNFVKSGD--------PSK--PNPMSKNFPMGDVFHSTA 559
Query: 252 IPT-DRPINEQKKAIFDK 302
P D+P E I D+
Sbjct: 560 WPQFDQPNREAYLEITDR 577
>Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 27.9 bits (59), Expect = 5.9
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 72 RSSTGFIMDGKTISKSIKRYINCRCKEADFEIAAYAFPAKKGANPPSEDR*VGIIQHSIA 251
R +GF D K ISK + Y++ K D P+K NP S++ +G + HS A
Sbjct: 510 RLYSGFNTDDKGISKVMMHYVSNFVKSGD--------PSK--PNPMSKNFPMGDVFHSTA 559
Query: 252 IPT-DRPINEQKKAIFDK 302
P D+P E I D+
Sbjct: 560 WPQFDQPNREAYLEITDR 577
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 368 IVLWKPNYI-NSLLTGDIDYLFYLIENCFFLLVNWT 264
+V+WKP I S + DI+Y Y + C+ WT
Sbjct: 136 LVVWKPPSIYKSFCSIDIEYFPYDTQTCWMKFGGWT 171
>AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 27.9 bits (59), Expect = 5.9
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 72 RSSTGFIMDGKTISKSIKRYINCRCKEADFEIAAYAFPAKKGANPPSEDR*VGIIQHSIA 251
R +GF D K ISK + Y++ K D P+K NP S++ +G + HS A
Sbjct: 510 RLYSGFNTDDKGISKVMMHYVSNFVKSGD--------PSK--PNPMSKNFPMGDVFHSTA 559
Query: 252 IPT-DRPINEQKKAIFDK 302
P D+P E I D+
Sbjct: 560 WPQFDQPNREAYLEITDR 577
>AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 27.9 bits (59), Expect = 5.9
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +3
Query: 72 RSSTGFIMDGKTISKSIKRYINCRCKEADFEIAAYAFPAKKGANPPSEDR*VGIIQHSIA 251
R +GF D K ISK + Y++ K D P+K NP S++ +G + HS A
Sbjct: 510 RLYSGFNTDDKGISKVMMHYVSNFVKSGD--------PSK--PNPMSKNFPMGDVFHSTA 559
Query: 252 IPT-DRPINEQKKAIFDK 302
P D+P E I D+
Sbjct: 560 WPQFDQPNREAYLEITDR 577
>AF067936-5|AAC19211.1| 430|Caenorhabditis elegans Hypothetical
protein C24G6.2b protein.
Length = 430
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 389 CTREKQPWCEFAESAEEGPTTRFLRELAVKYAM 487
C E +P C E + G +FLRE KY M
Sbjct: 154 CVTESEPLCLVVEYCDNGDLLKFLRE-RCKYMM 185
>AF067936-4|AAC19210.1| 903|Caenorhabditis elegans Hypothetical
protein C24G6.2a protein.
Length = 903
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 389 CTREKQPWCEFAESAEEGPTTRFLRELAVKYAM 487
C E +P C E + G +FLRE KY M
Sbjct: 627 CVTESEPLCLVVEYCDNGDLLKFLRE-RCKYMM 658
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,399,515
Number of Sequences: 27780
Number of extensions: 309397
Number of successful extensions: 930
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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