Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_F14
         (748 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL121914-1|CAC12716.1|  192|Homo sapiens chromosome 20 open read...   111   3e-24
AK075565-1|BAC11704.1|  192|Homo sapiens protein ( Homo sapiens ...   111   3e-24
AJ311123-1|CAC67490.1|  192|Homo sapiens hypothetical protein pr...   111   3e-24
BC017725-1|AAH17725.1|  192|Homo sapiens chromosome 20 open read...   109   8e-24
AK055618-1|BAB70973.1|  272|Homo sapiens protein ( Homo sapiens ...    64   4e-10

>AL121914-1|CAC12716.1|  192|Homo sapiens chromosome 20 open reading
           frame 108 protein.
          Length = 192

 Score =  111 bits (267), Expect = 3e-24
 Identities = 53/126 (42%), Positives = 75/126 (59%)
 Frame = -2

Query: 456 YRDKIMSKAVITRNMSTDQRASISAKEKLKKAVKEYGATVIVFHVSISLLSLGGCYLLVS 277
           ++D   +      ++S  +    S  ++LKK  +EYG   +  H+ ISL+SLG  Y++VS
Sbjct: 61  HQDPSQATGTTGSSVSCTEEKKQSKSQQLKKIFQEYGTVGVSLHIGISLISLGIFYMVVS 120

Query: 276 SGVDLVALLKYLNISEGTILKAAGSNAGTFVVAYGVHKLFAPLRIGITLTATPFIVRYLR 97
           SGVD+ A+L  L   E  +     +   TFVVAY +HKLFAP+RI ITL + P IVRY R
Sbjct: 121 SGVDMPAILLKLGFKESLVQSKMAAGTSTFVVAYAIHKLFAPVRISITLVSVPLIVRYFR 180

Query: 96  NIGFLK 79
            +GF K
Sbjct: 181 KVGFFK 186


>AK075565-1|BAC11704.1|  192|Homo sapiens protein ( Homo sapiens
           cDNA PSEC0265 fis, clone NT2RP3003235. ).
          Length = 192

 Score =  111 bits (267), Expect = 3e-24
 Identities = 53/126 (42%), Positives = 75/126 (59%)
 Frame = -2

Query: 456 YRDKIMSKAVITRNMSTDQRASISAKEKLKKAVKEYGATVIVFHVSISLLSLGGCYLLVS 277
           ++D   +      ++S  +    S  ++LKK  +EYG   +  H+ ISL+SLG  Y++VS
Sbjct: 61  HQDPSQATGTTGSSVSCTEEKKQSKSQQLKKIFQEYGTVGVSLHIGISLISLGIFYMVVS 120

Query: 276 SGVDLVALLKYLNISEGTILKAAGSNAGTFVVAYGVHKLFAPLRIGITLTATPFIVRYLR 97
           SGVD+ A+L  L   E  +     +   TFVVAY +HKLFAP+RI ITL + P IVRY R
Sbjct: 121 SGVDMPAILLKLGFKESLVQSKMAAGTSTFVVAYAIHKLFAPVRISITLVSVPLIVRYFR 180

Query: 96  NIGFLK 79
            +GF K
Sbjct: 181 KVGFFK 186


>AJ311123-1|CAC67490.1|  192|Homo sapiens hypothetical protein
           protein.
          Length = 192

 Score =  111 bits (267), Expect = 3e-24
 Identities = 53/126 (42%), Positives = 75/126 (59%)
 Frame = -2

Query: 456 YRDKIMSKAVITRNMSTDQRASISAKEKLKKAVKEYGATVIVFHVSISLLSLGGCYLLVS 277
           ++D   +      ++S  +    S  ++LKK  +EYG   +  H+ ISL+SLG  Y++VS
Sbjct: 61  HQDPSQATGTTGSSVSCTEEKKQSKSQQLKKIFQEYGTVGVSLHIGISLISLGIFYMVVS 120

Query: 276 SGVDLVALLKYLNISEGTILKAAGSNAGTFVVAYGVHKLFAPLRIGITLTATPFIVRYLR 97
           SGVD+ A+L  L   E  +     +   TFVVAY +HKLFAP+RI ITL + P IVRY R
Sbjct: 121 SGVDMPAILLKLGFKESLVQSKMAAGTSTFVVAYAIHKLFAPVRISITLVSVPLIVRYFR 180

Query: 96  NIGFLK 79
            +GF K
Sbjct: 181 KVGFFK 186


>BC017725-1|AAH17725.1|  192|Homo sapiens chromosome 20 open reading
           frame 108 protein.
          Length = 192

 Score =  109 bits (263), Expect = 8e-24
 Identities = 52/126 (41%), Positives = 74/126 (58%)
 Frame = -2

Query: 456 YRDKIMSKAVITRNMSTDQRASISAKEKLKKAVKEYGATVIVFHVSISLLSLGGCYLLVS 277
           ++D   +      ++S  +    S  ++LKK  +EYG   +  H+ ISL+SLG  Y++VS
Sbjct: 61  HQDPSQATGTTGSSVSCTEEKKQSKSQQLKKIFQEYGTVGVSLHIGISLISLGIFYMVVS 120

Query: 276 SGVDLVALLKYLNISEGTILKAAGSNAGTFVVAYGVHKLFAPLRIGITLTATPFIVRYLR 97
           SGVD+ A+L  L   E  +     +   TFVVAY +HKLF P+RI ITL + P IVRY R
Sbjct: 121 SGVDMPAILLKLGFKESLVQSKMAAGTSTFVVAYAIHKLFVPVRISITLVSVPLIVRYFR 180

Query: 96  NIGFLK 79
            +GF K
Sbjct: 181 KVGFFK 186


>AK055618-1|BAB70973.1|  272|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31056 fis, clone HSYRA2000760. ).
          Length = 272

 Score = 64.5 bits (150), Expect = 4e-10
 Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
 Frame = -2

Query: 495 HLHSAHYLTLRNEYRDKIMSKAVITRNMSTD--QRASISAKEKLKKAVKEYGATVIVFHV 322
           H     +++ R  +     ++    +    D  Q  SIS  ++ KK  ++YG  +I  H+
Sbjct: 83  HKQGKQHVSFRRVFSSSATAQGTPEKKEEPDPLQDKSISLYQRFKKTFRQYGKVLIPVHL 142

Query: 321 SISLLSLGGCYLLVSSGVDLVALLKYLNISEGTILKAAGSNAGTFVVAYGVHKLFAPLRI 142
             S +  G  Y     GV++V  L+ + + +  +     S +G  + AY + K+  P R 
Sbjct: 143 ITSGVWFGTFYYAALKGVNVVPFLELIGLPDSVVSILKNSQSGNALTAYALFKIATPARY 202

Query: 141 GITLTATPFIVRYLRNIGFL 82
            +TL  T   V+YLR+ G++
Sbjct: 203 TVTLGGTSVTVKYLRSHGYM 222


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,896,903
Number of Sequences: 237096
Number of extensions: 2211646
Number of successful extensions: 4057
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4056
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)