Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_F14
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-20|CAB60503.2| 263|Caenorhabditis elegans Hypothetical... 46 3e-05
AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi dom... 31 0.66
Z78019-7|CAB01454.2| 547|Caenorhabditis elegans Hypothetical pr... 30 2.0
U64849-7|AAC48048.1| 307|Caenorhabditis elegans Hypothetical pr... 29 3.5
U61953-5|AAC48080.2| 297|Caenorhabditis elegans Hypothetical pr... 29 4.6
U80023-11|AAG24044.1| 331|Caenorhabditis elegans Seven tm recep... 28 8.1
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 8.1
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 8.1
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 8.1
>AL132860-20|CAB60503.2| 263|Caenorhabditis elegans Hypothetical
protein Y56A3A.22 protein.
Length = 263
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = -2
Query: 375 KLKKAVKEYGATVIVFHVSISLLSLGGCYLLVSSGVDLVALLKYLNISEGTI--LKAAGS 202
K+K K Y + H + YL+V SGVD+++LL++L++ + + +K
Sbjct: 83 KVKYYFKRYWYIAVPAHAASCTAWFIALYLVVKSGVDVISLLEWLHMPDAIVEKVKNTPE 142
Query: 201 NAGTFVVAYGVHKLFAPLRIGITLTATPFIVRYLRNIGFLK 79
AG VV+ ++K+ P R TL LR +G LK
Sbjct: 143 TAGVVVVSLILYKIAMPFRYMTTLLLIQATFWTLRRLGKLK 183
>AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi
domain-containing protein2 protein.
Length = 975
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 569 GLGTLLCIEEERLTAPWQSYLFICGSRQVVGRDFKMNKHLII 694
G +LCI E+ +T Q Y FI Q++ +D K++K L +
Sbjct: 602 GCTFVLCITEDNITCLHQKYKFIEHHTQMIVQDMKLSKALSV 643
>Z78019-7|CAB01454.2| 547|Caenorhabditis elegans Hypothetical
protein ZK863.3 protein.
Length = 547
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = -2
Query: 699 RNIIKCLFI-LKSRPTTCLDPHMNKYDCHGAVSLSSSMQS---NVPRPFSGNHT 550
R+ +KC+ I +++RP CL H+N +G L +QS +V R + HT
Sbjct: 206 RSKMKCIGITIETRPDYCLPRHLNDMLLYGCTRLEIGVQSTYEDVARDTNRGHT 259
>U64849-7|AAC48048.1| 307|Caenorhabditis elegans Hypothetical
protein K04A8.2 protein.
Length = 307
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = -2
Query: 267 DLVALLKYLNISEGTILKAAGSNAGTFVVAYGVHKLFAPLRIGITL 130
DL +LK I + L G GT ++Y VH+++ P+R+ + +
Sbjct: 220 DLREMLKIKCILKKGGLLFLGVPIGTDAISYNVHRIYGPVRLALMM 265
>U61953-5|AAC48080.2| 297|Caenorhabditis elegans Hypothetical
protein R08C7.4 protein.
Length = 297
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -2
Query: 534 GSQWGQGHKYLSDHLHSAHYLTLRNEYRDKIMSKAVITRNMSTDQR 397
G +G+ K+L + HY + YR K SK V+ NM D+R
Sbjct: 120 GPMYGEESKWLEIIEYVEHYRLVECHYRSKFHSKWVV--NMDIDER 163
>U80023-11|AAG24044.1| 331|Caenorhabditis elegans Seven tm receptor
protein 47 protein.
Length = 331
Score = 27.9 bits (59), Expect = 8.1
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Frame = -2
Query: 408 TDQRASISAKEKLKKAVKEYGATVIVFHVSISLLSLGGCYLLVSSGVDLV---ALLKYLN 238
+D+ + K + A+K++ +IV + + L LVS+GVD+ L+ +
Sbjct: 160 SDEYMMVEMLNKYELAIKDFPRFIIVIYGADGSLRYRNVMYLVSAGVDVAIQYLLIIFCG 219
Query: 237 ISEGTILKAAGSNAGTFVVAYGVHKLFAPLRIGITLTATPFIV 109
I ++ N V +HK F LR I T P ++
Sbjct: 220 IKMHLVMNQGFKNVS--VANKKIHKQF--LRALIVQTIVPTVL 258
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -2
Query: 465 RNEYRDKIMSKAVITRNMSTDQRASISAKEKLKKAVKEYGA 343
+ E +K +A I ST+Q++ + A+ KLK+A +E A
Sbjct: 9359 QKETDEKQKLEAEIAGKKSTEQKSKLEAEAKLKRAAEEDAA 9399
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -2
Query: 465 RNEYRDKIMSKAVITRNMSTDQRASISAKEKLKKAVKEYGA 343
+ E +K +A I ST+Q++ + A+ KLK+A +E A
Sbjct: 9379 QKETDEKQKLEAEIAGKKSTEQKSKLEAEAKLKRAAEEDAA 9419
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -2
Query: 465 RNEYRDKIMSKAVITRNMSTDQRASISAKEKLKKAVKEYGA 343
+ E +K +A I ST+Q++ + A+ KLK+A +E A
Sbjct: 9379 QKETDEKQKLEAEIAGKKSTEQKSKLEAEAKLKRAAEEDAA 9419
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,409,718
Number of Sequences: 27780
Number of extensions: 360046
Number of successful extensions: 1024
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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