Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_F14
(748 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 24 1.7
AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase pro... 23 3.0
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 4.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 7.0
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 9.3
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 23.8 bits (49), Expect = 1.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 620 AMVLSVSPLQCRAMFLDHLVGITHISICQVPNG 522
+M +VSPLQC + FL G +C NG
Sbjct: 6 SMYNNVSPLQCTSPFLG---GPQLTDVCSASNG 35
>AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase
protein.
Length = 85
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +1
Query: 325 MKNDDCCTILFDSLFQFFFSTYRSSLI 405
+ N+ C ++ +LF F TY SLI
Sbjct: 24 LHNNMCTSLNLSNLFWLFVGTYFPSLI 50
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.6 bits (46), Expect = 4.0
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -2
Query: 378 EKLKKAVKEYGATVIVFHVSI 316
+K++ K+ ATV+ FHV++
Sbjct: 49 DKMRPPKKDGQATVVYFHVTV 69
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +1
Query: 349 ILFDSLFQFFFSTYRSSLICTHVSS 423
++++S + F TY++S++ TH S
Sbjct: 74 LMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +1
Query: 349 ILFDSLFQFFFSTYRSSLICTHVSS 423
++++S + F TY++S++ TH S
Sbjct: 74 LMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +1
Query: 349 ILFDSLFQFFFSTYRSSLICTHVSS 423
++++S + F TY++S++ TH S
Sbjct: 74 LMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +1
Query: 349 ILFDSLFQFFFSTYRSSLICTHVSS 423
++++S + F TY++S++ TH S
Sbjct: 74 LMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +1
Query: 349 ILFDSLFQFFFSTYRSSLICTHVSS 423
++++S + F TY++S++ TH S
Sbjct: 74 LMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +1
Query: 349 ILFDSLFQFFFSTYRSSLICTHVSS 423
++++S + F TY++S++ TH S
Sbjct: 74 LMYNSADEGFDGTYQTSVVVTHNGS 98
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.8 bits (44), Expect = 7.0
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -3
Query: 338 SSFFMSAFHCF 306
SSFF FHC+
Sbjct: 420 SSFFQQFFHCY 430
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 9.3
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -1
Query: 187 CCGLWSAQ 164
CCG WS+Q
Sbjct: 366 CCGKWSSQ 373
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,786
Number of Sequences: 438
Number of extensions: 4187
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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