Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_F12
(231 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12 pro... 113 7e-26
BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12 p... 113 7e-26
BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12 p... 113 7e-26
BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein. 113 7e-26
BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12 p... 113 7e-26
AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12 ... 113 7e-26
AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12 v... 112 2e-25
AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Riboso... 109 1e-24
BC113572-1|AAI13573.1| 472|Homo sapiens regulator of G-protein ... 29 2.7
BC104877-1|AAI04878.1| 472|Homo sapiens regulator of G-protein ... 29 2.7
BC033223-1|AAH33223.1| 192|Homo sapiens SLC45A4 protein protein. 29 2.7
AF465727-8|AAM03011.1| 435|Homo sapiens regulator of G protein ... 29 2.7
AF465727-6|AAM03009.1| 472|Homo sapiens regulator of G protein ... 29 2.7
AF156932-1|AAD40183.1| 472|Homo sapiens G protein signaling 6 r... 29 2.7
AF107620-1|AAD34718.1| 472|Homo sapiens regulator of G-protein ... 29 2.7
AF073920-1|AAC26049.2| 472|Homo sapiens regulator of G-protein ... 29 2.7
AL354798-8|CAI16639.1| 95|Homo sapiens protein ( Human DNA seq... 29 3.5
AB061683-1|BAB85807.1| 2849|Homo sapiens polycystin-1L1 protein. 28 4.6
AK129508-1|BAC85171.1| 474|Homo sapiens protein ( Homo sapiens ... 27 8.1
>L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 113 bits (273), Expect = 7e-26
Identities = 51/69 (73%), Positives = 62/69 (89%)
Frame = +1
Query: 1 RKKQKNIKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRAPHDI 180
RKKQKNIKH+GNIT ++++ IA+ MR RS+AR LSG++KEILGTAQSVGC V+GR PHDI
Sbjct: 92 RKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDI 151
Query: 181 IDDINSGAL 207
IDDINSGA+
Sbjct: 152 IDDINSGAV 160
>BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 113 bits (273), Expect = 7e-26
Identities = 51/69 (73%), Positives = 62/69 (89%)
Frame = +1
Query: 1 RKKQKNIKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRAPHDI 180
RKKQKNIKH+GNIT ++++ IA+ MR RS+AR LSG++KEILGTAQSVGC V+GR PHDI
Sbjct: 92 RKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDI 151
Query: 181 IDDINSGAL 207
IDDINSGA+
Sbjct: 152 IDDINSGAV 160
>BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 113 bits (273), Expect = 7e-26
Identities = 51/69 (73%), Positives = 62/69 (89%)
Frame = +1
Query: 1 RKKQKNIKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRAPHDI 180
RKKQKNIKH+GNIT ++++ IA+ MR RS+AR LSG++KEILGTAQSVGC V+GR PHDI
Sbjct: 92 RKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDI 151
Query: 181 IDDINSGAL 207
IDDINSGA+
Sbjct: 152 IDDINSGAV 160
>BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein.
Length = 132
Score = 113 bits (273), Expect = 7e-26
Identities = 51/69 (73%), Positives = 62/69 (89%)
Frame = +1
Query: 1 RKKQKNIKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRAPHDI 180
RKKQKNIKH+GNIT ++++ IA+ MR RS+AR LSG++KEILGTAQSVGC V+GR PHDI
Sbjct: 59 RKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDI 118
Query: 181 IDDINSGAL 207
IDDINSGA+
Sbjct: 119 IDDINSGAV 127
>BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 113 bits (273), Expect = 7e-26
Identities = 51/69 (73%), Positives = 62/69 (89%)
Frame = +1
Query: 1 RKKQKNIKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRAPHDI 180
RKKQKNIKH+GNIT ++++ IA+ MR RS+AR LSG++KEILGTAQSVGC V+GR PHDI
Sbjct: 92 RKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDI 151
Query: 181 IDDINSGAL 207
IDDINSGA+
Sbjct: 152 IDDINSGAV 160
>AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 113 bits (273), Expect = 7e-26
Identities = 51/69 (73%), Positives = 62/69 (89%)
Frame = +1
Query: 1 RKKQKNIKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRAPHDI 180
RKKQKNIKH+GNIT ++++ IA+ MR RS+AR LSG++KEILGTAQSVGC V+GR PHDI
Sbjct: 92 RKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDI 151
Query: 181 IDDINSGAL 207
IDDINSGA+
Sbjct: 152 IDDINSGAV 160
>AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12
variant protein.
Length = 197
Score = 112 bits (269), Expect = 2e-25
Identities = 50/69 (72%), Positives = 61/69 (88%)
Frame = +1
Query: 1 RKKQKNIKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRAPHDI 180
RKKQKNIKH+GNIT ++++ I + MR RS+AR LSG++KEILGTAQSVGC V+GR PHDI
Sbjct: 124 RKKQKNIKHSGNITFDEIVNIVRQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPHDI 183
Query: 181 IDDINSGAL 207
IDDINSGA+
Sbjct: 184 IDDINSGAV 192
>AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Ribosomal
Protein L12 LIKE protein) protein.
Length = 165
Score = 109 bits (263), Expect = 1e-24
Identities = 49/69 (71%), Positives = 60/69 (86%)
Frame = +1
Query: 1 RKKQKNIKHNGNITMEDVIGIAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGRAPHDI 180
RKKQKNIKHNGNIT ++++ IA+ MR RS+AR LSG++KEI GTAQS+GC V+G PHDI
Sbjct: 92 RKKQKNIKHNGNITFDEIVNIARQMRHRSLARELSGTIKEIPGTAQSMGCNVDGHHPHDI 151
Query: 181 IDDINSGAL 207
IDDINSGA+
Sbjct: 152 IDDINSGAV 160
>BC113572-1|AAI13573.1| 472|Homo sapiens regulator of G-protein
signaling 6 protein.
Length = 472
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 13 KNIKHNGNITMEDVIG-IAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGR 165
+N+K G T ED I K+M+ S AR+L + + L A+ G ++ G+
Sbjct: 412 QNVKDGGRYTFEDAQEHIYKLMKSDSYARFLRSNAYQDLLLAKKKGKSLAGK 463
>BC104877-1|AAI04878.1| 472|Homo sapiens regulator of G-protein
signaling 6 protein.
Length = 472
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 13 KNIKHNGNITMEDVIG-IAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGR 165
+N+K G T ED I K+M+ S AR+L + + L A+ G ++ G+
Sbjct: 412 QNVKDGGRYTFEDAQEHIYKLMKSDSYARFLRSNAYQDLLLAKKKGKSLAGK 463
>BC033223-1|AAH33223.1| 192|Homo sapiens SLC45A4 protein protein.
Length = 192
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = -3
Query: 172 GGPCPPQCIQ-QIVLCQG 122
G PCPPQC Q + LC+G
Sbjct: 141 GIPCPPQCCQGHVALCRG 158
>AF465727-8|AAM03011.1| 435|Homo sapiens regulator of G protein
signaling 6 alpha2-GGL protein.
Length = 435
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 13 KNIKHNGNITMEDVIG-IAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGR 165
+N+K G T ED I K+M+ S AR+L + + L A+ G ++ G+
Sbjct: 375 QNVKDGGRYTFEDAQEHIYKLMKSDSYARFLRSNAYQDLLLAKKKGKSLAGK 426
>AF465727-6|AAM03009.1| 472|Homo sapiens regulator of G protein
signaling 6 alpha2 protein.
Length = 472
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 13 KNIKHNGNITMEDVIG-IAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGR 165
+N+K G T ED I K+M+ S AR+L + + L A+ G ++ G+
Sbjct: 412 QNVKDGGRYTFEDAQEHIYKLMKSDSYARFLRSNAYQDLLLAKKKGKSLAGK 463
>AF156932-1|AAD40183.1| 472|Homo sapiens G protein signaling 6
regulator protein.
Length = 472
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 13 KNIKHNGNITMEDVIG-IAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGR 165
+N+K G T ED I K+M+ S AR+L + + L A+ G ++ G+
Sbjct: 412 QNVKDGGRYTFEDAQEHIYKLMKSDSYARFLRSNAYQDLLLAKKKGKSLAGK 463
>AF107620-1|AAD34718.1| 472|Homo sapiens regulator of G-protein
signaling-6 short isoform protein.
Length = 472
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 13 KNIKHNGNITMEDVIG-IAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGR 165
+N+K G T ED I K+M+ S AR+L + + L A+ G ++ G+
Sbjct: 412 QNVKDGGRYTFEDAQEHIYKLMKSDSYARFLRSNAYQDLLLAKKKGKSLAGK 463
>AF073920-1|AAC26049.2| 472|Homo sapiens regulator of G-protein
signaling 6 protein.
Length = 472
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 13 KNIKHNGNITMEDVIG-IAKIMRPRSMARYLSGSVKEILGTAQSVGCTVEGR 165
+N+K G T ED I K+M+ S AR+L + + L A+ G ++ G+
Sbjct: 412 QNVKDGGRYTFEDAQEHIYKLMKSDSYARFLRSNAYQDLLLAKKKGKSLAGK 463
>AL354798-8|CAI16639.1| 95|Homo sapiens protein ( Human DNA
sequence from clone RP11-756A22 on chromosome 13
Contains the 3' end of a novel gene, the CENJP gene for
centromere protein J ).
Length = 95
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -3
Query: 169 GPCPPQCIQQIVLCQGFLLLSLRGNVPLNEDALSWQCQ*HLPL*YF 32
G C P C+Q I C+GF+ + + +N+ + Q +LP YF
Sbjct: 29 GLCLPYCLQNIFNCRGFIYQEMNWIIHINKKLGKFIHQ-NLPWRYF 73
>AB061683-1|BAB85807.1| 2849|Homo sapiens polycystin-1L1 protein.
Length = 2849
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 51 CHWHCQDNASSFNGTLPLRLSKRNPWHSTICWMHCG 158
C H Q +S G +P PW S+ W CG
Sbjct: 2107 CPPHTQAPSSGLEGLMPQWSRALQPWWSSAVWAICG 2142
>AK129508-1|BAC85171.1| 474|Homo sapiens protein ( Homo sapiens
cDNA FLJ25997 fis, clone DMC06923, highly similar to Ig
gamma-1 chain C region. ).
Length = 474
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 100 LSGSVKEILGTAQSVGCTVEGRAPHDIIDDINSGALT 210
L+ S K G ++GC V+ P + NSGALT
Sbjct: 155 LAPSSKSTSGGTAALGCLVKDYFPESVTVSWNSGALT 191
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,995,766
Number of Sequences: 237096
Number of extensions: 760864
Number of successful extensions: 2187
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2187
length of database: 76,859,062
effective HSP length: 55
effective length of database: 63,818,782
effective search space used: 1340194422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -