Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_F12
         (231 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              29   0.010
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   1.5  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   2.0  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   2.0  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    20   4.6  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    19   6.1  

>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 28.7 bits (61), Expect = 0.010
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +1

Query: 112 VKEILGTAQSVGCTVEGRAPHDIIDDINSGALTIDE 219
           +K  L T QSV C  E      IIDDIN G + +D+
Sbjct: 22  LKSGLHTVQSV-CMKEIGTAQQIIDDINEGKINMDD 56


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +1

Query: 103  SGSVKEILGTAQSVGCTVEGRAPHDIIDDINSGA 204
            +G  +   GT+ S G     + P D+ + I  G+
Sbjct: 1244 AGIAETSAGTSNSRGAAQMSKVPRDVSEGIYDGS 1277


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 1   RKKQKNIKHNGNITMEDVIGIAKIMRP 81
           ++ ++  +  G + ME+ +  AK MRP
Sbjct: 183 QEAKRRFEKYGQLFMEETLKAAKRMRP 209


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 12/40 (30%), Positives = 15/40 (37%)
 Frame = +3

Query: 30  WKYHNGRCHWHCQDNASSFNGTLPLRLSKRNPWHSTICWM 149
           W +   R H   Q     F   LP  L  R P  + + WM
Sbjct: 320 WNFRGPRTHRMPQLIRKIFLKYLPTILMMRRPKKTRLRWM 359


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 19.8 bits (39), Expect = 4.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1

Query: 186 IDDVMGGPALHSAS 145
           IDD +G  A H AS
Sbjct: 334 IDDPVGASATHGAS 347


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
            protein.
          Length = 1124

 Score = 19.4 bits (38), Expect = 6.1
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 166  PCPPQCIQQIVLCQ 125
            P PP    Q+V CQ
Sbjct: 1109 PLPPALPPQVVSCQ 1122


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,698
Number of Sequences: 438
Number of extensions: 1228
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3785850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)