Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_F11
         (686 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2887|AAN09510.1|  335|Drosophila melanogaster CG14208-P...    29   6.0  
AE014298-2886|AAN09509.1|  441|Drosophila melanogaster CG14208-P...    29   6.0  
AE014298-2649|AAN09453.1|  357|Drosophila melanogaster CG32494-P...    29   6.0  
AE014297-3325|AAF56134.2| 1033|Drosophila melanogaster CG17379-P...    29   7.9  

>AE014298-2887|AAN09510.1|  335|Drosophila melanogaster CG14208-PA,
           isoform A protein.
          Length = 335

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = -1

Query: 404 CSGGSSGYFRRLSPTLV*RRPSTPPYHL 321
           C+ G SG +  LSPTLV   PST  Y L
Sbjct: 133 CTSGFSGLWAGLSPTLVSALPSTIIYFL 160


>AE014298-2886|AAN09509.1|  441|Drosophila melanogaster CG14208-PB,
           isoform B protein.
          Length = 441

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = -1

Query: 404 CSGGSSGYFRRLSPTLV*RRPSTPPYHL 321
           C+ G SG +  LSPTLV   PST  Y L
Sbjct: 133 CTSGFSGLWAGLSPTLVSALPSTIIYFL 160


>AE014298-2649|AAN09453.1|  357|Drosophila melanogaster CG32494-PA
           protein.
          Length = 357

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 10/21 (47%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = +3

Query: 15  HSKSYVYTYIYVY-CCNVYFW 74
           H+ +Y+ T++YVY C NV+ W
Sbjct: 269 HTHAYIRTHLYVYVCTNVFEW 289


>AE014297-3325|AAF56134.2| 1033|Drosophila melanogaster CG17379-PA
           protein.
          Length = 1033

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +3

Query: 237 TSVFFF*RGECIYALPLPIALGGSSPPMQMVRGCGG 344
           ++V F  R E ++   +PIALGGSSP + + R   G
Sbjct: 41  STVIFEKRLENLHGYEVPIALGGSSPRLIVYRDLEG 76


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,695,164
Number of Sequences: 53049
Number of extensions: 938582
Number of successful extensions: 2001
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1997
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)