Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_F08
         (584 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0229 - 1771701-1774164,1774694-1774847,1774980-1775055,177...    33   0.22 
11_01_0666 + 5433582-5433668,5433698-5434225                           29   3.6  
11_01_0494 + 3804913-3805679,3806341-3806530                           28   4.8  
10_08_0793 - 20614583-20614897,20615417-20615660,20617713-206178...    28   6.3  
12_01_0227 - 1718726-1721183,1721804-1721957,1722090-1722165,172...    27   8.3  
05_03_0467 - 14366969-14367742,14368335-14368754,14370339-143704...    27   8.3  

>11_01_0229 -
           1771701-1774164,1774694-1774847,1774980-1775055,
           1775439-1775477,1778516-1778674,1778741-1778851,
           1779014-1779064,1779173-1779256
          Length = 1045

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 15/63 (23%), Positives = 31/63 (49%)
 Frame = -1

Query: 326 ESYSYNDGDGGGKSLGCQIDQNVYYLLKMNRLKMNHLKMNCLKMNHHCLNCRYCQSHDPS 147
           + Y ++  +GGG+SL    ++ + YL   N++  NH+    + + H       C+  DP 
Sbjct: 140 QKYQWHKNEGGGESLNQLSERCISYL---NKVAQNHIGERVIVVGHGAAILELCRHTDPP 196

Query: 146 DHA 138
           + +
Sbjct: 197 NRS 199


>11_01_0666 + 5433582-5433668,5433698-5434225
          Length = 204

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 186 VMIHLQTVHLQMIHLQTIHLQ 248
           +M+H    HLQ IHL T+HL+
Sbjct: 29  LMLHGWGAHLQSIHLATVHLE 49


>11_01_0494 + 3804913-3805679,3806341-3806530
          Length = 318

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
 Frame = -1

Query: 362 YIHYYMVVCYEVESYSYNDGDGGGKSLGCQIDQNVYYLLKMNR-LKMNHLKMNCLKMNHH 186
           Y HY  ++C  + S      D  G  +G +        +  N  ++++H +  C  ++ H
Sbjct: 245 YDHYNELMC-TIRSQPRTAADASGLLVGRETCDACPAQIDENASVRLSHQE-GCFSVSGH 302

Query: 185 CLNCRYCQSHDP 150
           C +CR  + H P
Sbjct: 303 CPSCRCSRGHGP 314


>10_08_0793 -
           20614583-20614897,20615417-20615660,20617713-20617899,
           20618508-20618547,20618699-20618775,20618965-20619091
          Length = 329

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 203 LKMNHHCLNCRYCQSHDPSDHASG 132
           L+ +HH  N  YC+ H  S HA G
Sbjct: 105 LQDHHHECNGPYCRCHSSSKHAKG 128


>12_01_0227 -
           1718726-1721183,1721804-1721957,1722090-1722165,
           1722327-1722485,1722552-1722662,1722791-1722841,
           1722948-1723192,1723745-1725278
          Length = 1595

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = -1

Query: 296 GGKSLGCQIDQNVYYLLKMNRLKMNHLKMNCLKMNHHCLNCRYCQSHDP 150
           GG+SL    +Q + YL   N++  NH+    + + H       C+  DP
Sbjct: 702 GGESLNQLSEQGISYL---NKVAQNHIGERVIVVGHGAAILELCRHTDP 747


>05_03_0467 -
           14366969-14367742,14368335-14368754,14370339-14370496,
           14370571-14370664,14371536-14371649,14371794-14371985,
           14372095-14372176,14372280-14372471,14372773-14373371
          Length = 874

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 31  YRSECLSILDKNEMECHPHSNFSAVLSEYYG 123
           Y SEC+SI +  E  C P+     V+ + YG
Sbjct: 506 YISECISIFESMEGHCAPNIGTINVMIKVYG 536


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,144,038
Number of Sequences: 37544
Number of extensions: 146519
Number of successful extensions: 582
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)