Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_F08
         (584 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC053326-1|AAH53326.1|  497|Homo sapiens family with sequence si...    30   6.9  
AK025808-1|BAB15241.1|  497|Homo sapiens protein ( Homo sapiens ...    30   6.9  

>BC053326-1|AAH53326.1|  497|Homo sapiens family with sequence
           similarity 134, member B protein.
          Length = 497

 Score = 29.9 bits (64), Expect = 6.9
 Identities = 11/37 (29%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -2

Query: 355 IIIWWSVMR-WKVIHIMMVMVVGKVWVAKLIKMFIIS 248
           ++ W+  +  W+V H++ VM++G+V + ++IK  ++S
Sbjct: 104 LLFWFLALTPWRVYHLISVMILGRV-IMQIIKDMVLS 139


>AK025808-1|BAB15241.1|  497|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22155 fis, clone HRC00205. ).
          Length = 497

 Score = 29.9 bits (64), Expect = 6.9
 Identities = 11/37 (29%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = -2

Query: 355 IIIWWSVMR-WKVIHIMMVMVVGKVWVAKLIKMFIIS 248
           ++ W+  +  W+V H++ VM++G+V + ++IK  ++S
Sbjct: 104 LLFWFLALTPWRVYHLISVMILGRV-IMQIIKDMVLS 139


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,740,561
Number of Sequences: 237096
Number of extensions: 908219
Number of successful extensions: 2572
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2563
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)