Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_F08
         (584 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z81570-3|CAB04603.1|  351|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z70284-20|CAA94286.2|  543|Caenorhabditis elegans Hypothetical p...    28   5.6  
Z70271-8|CAA94238.2|  543|Caenorhabditis elegans Hypothetical pr...    28   5.6  
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr...    27   7.4  
AL032651-1|CAB60580.1|  681|Caenorhabditis elegans Hypothetical ...    27   7.4  
AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical ...    27   9.8  

>Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical
           protein K12G11.3 protein.
          Length = 349

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -1

Query: 197 MNHHCLNCRYC-QSHDPSDH 141
           MN +CLNC +C + H+P  H
Sbjct: 96  MNFNCLNCEFCKKGHEPLCH 115


>Z81570-3|CAB04603.1|  351|Caenorhabditis elegans Hypothetical
           protein K12G11.4 protein.
          Length = 351

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 11/21 (52%), Positives = 16/21 (76%), Gaps = 2/21 (9%)
 Frame = -1

Query: 197 MNHHCLNCRYCQS-HDP-SDH 141
           +N +CLNC YC++ H+P  DH
Sbjct: 97  INANCLNCEYCKTGHEPLCDH 117


>Z70284-20|CAA94286.2|  543|Caenorhabditis elegans Hypothetical
           protein W08D2.8 protein.
          Length = 543

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 427 NKTYRKNHNKTYRKNYNKTYRKNHNKTYRRN 519
           NKT RK+H  T R N N T  +  ++   +N
Sbjct: 471 NKTNRKSHTSTDRTNSNNTLTRKKSRDAGKN 501



 Score = 27.1 bits (57), Expect = 9.8
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
 Frame = +1

Query: 427 NKTYRKNHNKTYRKNY---NKTYRKNHNKTYRRNHNKT 531
           N    K  ++  R N    NKT RK+H  T R N N T
Sbjct: 452 NPAIEKKKSEDRRNNMDRRNKTNRKSHTSTDRTNSNNT 489


>Z70271-8|CAA94238.2|  543|Caenorhabditis elegans Hypothetical
           protein W08D2.8 protein.
          Length = 543

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 427 NKTYRKNHNKTYRKNYNKTYRKNHNKTYRRN 519
           NKT RK+H  T R N N T  +  ++   +N
Sbjct: 471 NKTNRKSHTSTDRTNSNNTLTRKKSRDAGKN 501



 Score = 27.1 bits (57), Expect = 9.8
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
 Frame = +1

Query: 427 NKTYRKNHNKTYRKNY---NKTYRKNHNKTYRRNHNKT 531
           N    K  ++  R N    NKT RK+H  T R N N T
Sbjct: 452 NPAIEKKKSEDRRNNMDRRNKTNRKSHTSTDRTNSNNT 489


>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical
           protein F30H5.3 protein.
          Length = 1599

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -1

Query: 362 YIHYYMVVCYEVESYSYNDGDGGGKSLGCQIDQNVY 255
           Y +YY     E ESY YN  DG   +   + D   Y
Sbjct: 686 YRYYYNSQTQECESYQYNGCDGNSNNFATREDCEGY 721


>AL032651-1|CAB60580.1|  681|Caenorhabditis elegans Hypothetical
           protein Y6D1A.1 protein.
          Length = 681

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -1

Query: 221 HLKMNCLKMNHHCLNCRYCQSHDPSD--HASGVC-RP*YSDRTAE 96
           H   NC  +  H   CRYC   DP+   H  G+C +P  S + AE
Sbjct: 634 HSFKNCRLVKLHV--CRYCNDEDPNVELHNYGLCPKPTPSQKPAE 676


>AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical
           protein D2063.1 protein.
          Length = 326

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 9/14 (64%), Positives = 12/14 (85%), Gaps = 1/14 (7%)
 Frame = -1

Query: 188 HCLNCRYCQS-HDP 150
           +CLNC YCQ+ H+P
Sbjct: 100 NCLNCEYCQTGHEP 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,283,785
Number of Sequences: 27780
Number of extensions: 143782
Number of successful extensions: 531
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)