Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_F07
         (579 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68220-2|CAA92485.1|  234|Caenorhabditis elegans Hypothetical pr...    33   0.19 
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr...    31   0.78 
Z99288-10|CAB16552.2|  338|Caenorhabditis elegans Hypothetical p...    28   4.2  
Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z81483-7|CAB03964.2|  338|Caenorhabditis elegans Hypothetical pr...    28   4.2  
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ...    27   9.6  
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.      27   9.6  

>Z68220-2|CAA92485.1|  234|Caenorhabditis elegans Hypothetical
           protein T20D3.2 protein.
          Length = 234

 Score = 32.7 bits (71), Expect = 0.19
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +2

Query: 32  QYQTCSGRSSFYCLSLCASASKPIPDCQRTLFYYITYR 145
           Q+  C G S + C++L    +KP PD   T  Y  T+R
Sbjct: 101 QFYQCLGSSYYTCMNLYTLLNKPQPDFSNTFDYVRTFR 138


>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
            F32H2.5 protein.
          Length = 2586

 Score = 30.7 bits (66), Expect = 0.78
 Identities = 20/54 (37%), Positives = 24/54 (44%)
 Frame = +2

Query: 233  STLCW*RQNIVSAIGSLDLTNRQKLGAATAGVALDNVNGHGVSLTDTHIPGFGD 394
            S  C  R      IG +DL+    LG A     LDNV+ HG+ L     P  GD
Sbjct: 1819 SLRCLARHGRFLEIGKVDLSQNSSLGMAKL---LDNVSVHGILLDSIMDPTVGD 1869


>Z99288-10|CAB16552.2|  338|Caenorhabditis elegans Hypothetical
           protein ZK262.11 protein.
          Length = 338

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 507 LKWGTLAISGIFLVA-KAFAVMSWXSLWKRFTLP 409
           L++ TL I+GIF    +     SW  LWK+F  P
Sbjct: 108 LQFVTLGITGIFENRFRIICKFSWVPLWKKFITP 141


>Z81573-3|CAB04624.3|  398|Caenorhabditis elegans Hypothetical
           protein M02G9.2 protein.
          Length = 398

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +2

Query: 41  TCSGRSSFYCLSLCASASKPIPDCQ 115
           TC    S  CLS+CAS+  P  +CQ
Sbjct: 218 TCRTSCSSACLSVCASSGVPGNECQ 242


>Z81483-7|CAB03964.2|  338|Caenorhabditis elegans Hypothetical
           protein C43D7.6 protein.
          Length = 338

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -1

Query: 507 LKWGTLAISGIFLVA-KAFAVMSWXSLWKRFTLP 409
           L++ TL I+GIF    +     SW  LWK+F  P
Sbjct: 108 LQFVTLGITGIFENRFRIICKFSWVPLWKKFITP 141


>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
           protein Y76A2B.1 protein.
          Length = 1057

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 399 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPI 271
           T+SP P   V    TP   T S +TP+V  P+F   V  + P+
Sbjct: 485 TISPEPVTIVKPASTP--ATDSVSTPSVVGPAFGKKVPEQPPV 525


>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
           protein Y76A2B.1 protein.
          Length = 1057

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 399 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPI 271
           T+SP P   V    TP   T S +TP+V  P+F   V  + P+
Sbjct: 485 TISPEPVTIVKPASTP--ATDSVSTPSVVGPAFGKKVPEQPPV 525


>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
          Length = 1057

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 399 TLSPNPGMCVSVRLTPWPFTLSSATPAVAAPSFCLLVKSKEPI 271
           T+SP P   V    TP   T S +TP+V  P+F   V  + P+
Sbjct: 485 TISPEPVTIVKPASTP--ATDSVSTPSVVGPAFGKKVPEQPPV 525


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,283,909
Number of Sequences: 27780
Number of extensions: 269522
Number of successful extensions: 654
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)