Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_F07
         (579 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   1.6  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   1.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   5.0  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   8.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   8.8  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 465 AKAFAVMSWXSLWKRFTLPAAVTL 394
           AK  +V  W S W     P+A T+
Sbjct: 328 AKTISVQQWNSYWGILGFPSAPTI 351


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 465 AKAFAVMSWXSLWKRFTLPAAVTL 394
           AK  +V  W S W     P+A T+
Sbjct: 328 AKTISVQQWNSYWGILGFPSAPTI 351


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 13/51 (25%), Positives = 22/51 (43%)
 Frame = +2

Query: 353 GVSLTDTHIPGFGDKVTAAGKVNLFHNDXHDITAKAFATRNMPDIANVPHF 505
           G  +T+      G +  AAG+  LF  D ++   +   T +     N+ HF
Sbjct: 527 GEVITNEEAEKRGKEYDAAGRTYLFDLDYNESEEQCPYTVDAAIYGNISHF 577


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +2

Query: 458 AFATRNMPDIANVPHFNTVRGGIDYIFTR*DWCI 559
           AF+   +P+    PHFN   G     F    +C+
Sbjct: 431 AFSESCLPEEILCPHFNVTDGETTKTFCCKGYCM 464


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 238 PLLVTTEYSKRYR 276
           P ++T +YSKRY+
Sbjct: 315 PQILTYKYSKRYK 327


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,935
Number of Sequences: 438
Number of extensions: 3247
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)