Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_F06
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    24   0.93 
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   6.6  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   8.7  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 9/40 (22%), Positives = 19/40 (47%)
 Frame = +1

Query: 499 THHQQKTPFLLVGTQIDLRDDPATMEKLAKIKQKPVSLEQ 618
           THH  K P   +GT + +      +E++  +    +++ Q
Sbjct: 276 THHLDKNPENTLGTMLSIHPSKLDVEQMNLLHSNDLNMHQ 315


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1

Query: 481 KWVPEITHHQQKTPFLLVGTQIDL 552
           K   ++ +   KT  LLVG +ID+
Sbjct: 211 KRASDLCNEANKTKILLVGLKIDI 234


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/45 (22%), Positives = 21/45 (46%)
 Frame = +1

Query: 442 SVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDPATME 576
           S+ SPS+ +++     P   +  Q  P+  +     +  DP+ M+
Sbjct: 131 SIPSPSTTDDLSTNPTPPPHYTYQIIPYEALNVDDHILSDPSLMD 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,170
Number of Sequences: 336
Number of extensions: 3673
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)