Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0005_F06
(645 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0708 - 31103246-31103359,31104146-31104178,31104297-311043... 179 2e-45
05_06_0061 + 25274693-25274794,25274982-25275069,25275186-252752... 169 1e-42
02_01_0155 - 1080923-1081024,1081111-1081176,1081306-1081370,108... 169 1e-42
02_02_0624 - 12323702-12323777,12324219-12324304,12324360-123244... 169 2e-42
02_05_1357 + 35899480-35899578,35900247-35900334,35900438-359005... 167 5e-42
06_01_0907 + 7001946-7002050,7002389-7002476,7002606-7002679,700... 154 7e-38
01_01_0909 - 7163886-7163931,7164148-7164254,7164370-7164435,716... 124 6e-29
11_03_0182 + 11307275-11307368,11307485-11307594,11307654-113078... 78 5e-15
01_05_0340 - 21139885-21139978,21140169-21140272,21140379-211405... 71 6e-13
05_03_0590 - 15884485-15884489,15884702-15884790,15885086-158852... 71 1e-12
02_05_0161 + 26384079-26384086,26386173-26386226,26386376-263864... 69 2e-12
01_01_0565 - 4159946-4160042,4160140-4160243,4160378-4160533,416... 69 2e-12
06_03_0414 - 20548577-20549006,20553521-20553744 67 1e-11
07_03_0473 - 18525712-18525858,18526049-18526162,18526442-185265... 66 2e-11
09_02_0464 - 9591139-9591571,9592601-9592818 64 7e-11
05_07_0127 - 27872803-27873238,27873842-27874059 64 9e-11
10_08_0250 - 16179646-16179759,16180197-16180325,16180519-161806... 63 2e-10
10_03_0038 - 7297210-7297248,7297361-7297429,7297524-7297731,729... 63 2e-10
03_06_0407 - 33714563-33714636,33714966-33715152,33715943-337160... 63 2e-10
01_01_0893 + 7043130-7043182,7043309-7043335,7043461-7043560,704... 63 2e-10
05_01_0036 + 253734-253904,255216-255707 63 2e-10
03_01_0326 + 2535800-2535938,2536891-2536959,2537310-2537375,253... 63 2e-10
01_06_0712 + 31397167-31397402,31399823-31400252 63 2e-10
03_05_0601 + 26039326-26039367,26039958-26040035,26040136-260403... 62 3e-10
05_06_0082 - 25425050-25425479,25426551-25426783 61 6e-10
01_06_1343 - 36461476-36461961,36463355-36463519 61 6e-10
01_06_0186 + 27294973-27295211,27295610-27296045 59 3e-09
02_04_0402 + 22618998-22619043,22619206-22619345,22620067-226201... 59 3e-09
01_05_0673 + 24183512-24183514,24183625-24183694,24184203-241842... 59 3e-09
05_07_0205 - 28402436-28402505,28402604-28402681,28402789-284029... 58 5e-09
04_04_0191 + 23468410-23468455,23468560-23468699,23469119-234692... 58 5e-09
12_02_1213 + 27058329-27058370,27058634-27058711,27058807-270589... 58 6e-09
09_06_0029 + 20336634-20336881,20337737-20338208 58 6e-09
06_03_1387 - 29820358-29821035 58 6e-09
05_03_0286 - 11623575-11624063,11625098-11625262 58 6e-09
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 56 3e-08
05_01_0037 - 256891-256998,257347-257502,257753-257824,258737-25... 56 3e-08
09_02_0222 + 5968232-5968467,5970811-5971187,5972216-5972256,597... 55 4e-08
07_03_1397 + 26269186-26269525,26269727-26269932,26270225-262703... 52 4e-07
03_06_0475 + 34193951-34194023,34195414-34195486,34195572-341956... 52 5e-07
07_01_0926 - 7775536-7775616,7775695-7775787,7775903-7775965,777... 51 7e-07
08_02_1318 - 26111031-26111276,26112139-26112427,26112936-261130... 51 9e-07
03_06_0637 - 35219212-35219754,35220405-35220587 50 1e-06
03_06_0501 - 34380155-34380637,34380961-34381029,34382206-343822... 39 2e-06
05_06_0080 + 25420371-25420423,25420681-25420780,25421742-254218... 46 3e-05
05_06_0217 + 26457847-26457902,26458336-26458435,26458551-264586... 45 6e-05
06_03_1187 + 28267535-28267568,28267620-28267645,28267808-282679... 43 2e-04
03_01_0365 - 2839190-2839251,2839637-2839694,2839946-2840032,284... 42 4e-04
05_05_0118 - 22504483-22504566,22504650-22504742,22504852-225049... 41 7e-04
10_06_0181 - 11532765-11533203,11536867-11537036 39 0.003
01_06_1314 + 36215607-36215734,36215911-36216043,36216135-362162... 38 0.009
10_08_0165 + 15356748-15356811,15357113-15357186,15357311-153573... 37 0.012
07_03_0638 + 20196216-20196650,20196810-20196930,20197072-201971... 34 0.11
03_06_0408 - 33722741-33722893,33723174-33723350,33723798-337239... 31 0.59
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 31 0.78
03_01_0647 + 4745788-4745907,4746510-4746591,4746847-4746958,474... 30 1.8
02_03_0084 - 15041261-15041437,15041625-15041765,15042857-150429... 27 9.7
>02_05_0708 -
31103246-31103359,31104146-31104178,31104297-31104362,
31104532-31104596,31105456-31105519,31105629-31105738,
31105886-31105973,31106328-31106432
Length = 214
Score = 179 bits (435), Expect = 2e-45
Identities = 81/151 (53%), Positives = 112/151 (74%)
Frame = +1
Query: 190 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDT 369
S + IKCV VGDGAVGKTC+LI YT+NKFP++Y+PTVFDN++ V++ LGL+DT
Sbjct: 4 SASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVDSTTVNLGLWDT 63
Query: 370 AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQID 549
AGQEDY+RLRPLSY DVF++ FS+VS +S+EN+ +KW+PE+ H+ P +LVGT++D
Sbjct: 64 AGQEDYNRLRPLSYRGADVFVLAFSLVSRASYENIMKKWIPELQHYAPGVPIVLVGTKLD 123
Query: 550 LRDDPATMEKLAKIKQKPVSLEQGEKLAKEL 642
LR+D + L PV+ QGE+L K++
Sbjct: 124 LREDKHYL--LDHPGMIPVTTAQGEELRKQI 152
>05_06_0061 +
25274693-25274794,25274982-25275069,25275186-25275295,
25275542-25275605,25275713-25275777,25275864-25275929,
25276084-25276199,25276382-25276415
Length = 214
Score = 169 bits (412), Expect = 1e-42
Identities = 76/146 (52%), Positives = 105/146 (71%)
Frame = +1
Query: 205 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 384
IKCV VGDGAVGKTC+LI YT+NKFP++Y+PTVFDN++ V + G LGL+DTAGQED
Sbjct: 8 IKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVSVDGNIVNLGLWDTAGQED 67
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDDP 564
Y RLRPLSY D+F++ FS++S +S+ENV +KW+PE+ P +LVGT++DLRD
Sbjct: 68 YSRLRPLSYRGADIFVLAFSLISRASYENVLKKWMPELRRFAPNVPIVLVGTKLDLRDHR 127
Query: 565 ATMEKLAKIKQKPVSLEQGEKLAKEL 642
+ + ++ QGE+L K++
Sbjct: 128 SYLAD--HPAASAITTAQGEELRKQI 151
>02_01_0155 -
1080923-1081024,1081111-1081176,1081306-1081370,
1081938-1082001,1082359-1082507,1082591-1082678,
1083757-1083855
Length = 210
Score = 169 bits (412), Expect = 1e-42
Identities = 83/164 (50%), Positives = 112/164 (68%), Gaps = 13/164 (7%)
Frame = +1
Query: 190 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDT 369
S + IKCV VGDGAVGKTC+LISYT+N FP++YVPTVFDN++ V++ G LGL+DT
Sbjct: 2 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDT 61
Query: 370 AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEK-------------WVPEITHHQ 510
AGQEDY+RLRPLSY DVFL+ FS++S +S+ENV +K W+PE+ H+
Sbjct: 62 AGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKARDSLSFSVNNIDWIPELKHYA 121
Query: 511 QKTPFLLVGTQIDLRDDPATMEKLAKIKQKPVSLEQGEKLAKEL 642
P +LVGT++DLRDD + P++ QGE+L K++
Sbjct: 122 PGVPIILVGTKLDLRDDKQFF--VDHPGAVPITTAQGEELRKQI 163
>02_02_0624 -
12323702-12323777,12324219-12324304,12324360-12324425,
12324650-12324762,12324793-12324856,12324950-12325059,
12325473-12325560,12325651-12325749
Length = 233
Score = 169 bits (410), Expect = 2e-42
Identities = 71/120 (59%), Positives = 96/120 (80%)
Frame = +1
Query: 190 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDT 369
S + IKCV VGDGAVGKTC+LISYT+N FP++YVPTVFDN++ V++ G LGL+DT
Sbjct: 2 STARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDT 61
Query: 370 AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQID 549
AGQEDY+RLRPLSY DVFL+ FS++S +S+EN+ +KW+PE+ H+ P +LVGT+++
Sbjct: 62 AGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWIPELRHYAPNVPIVLVGTKLE 121
>02_05_1357 +
35899480-35899578,35900247-35900334,35900438-35900592,
35900652-35900715,35902910-35902974,35903061-35903126,
35903644-35903745
Length = 212
Score = 167 bits (407), Expect = 5e-42
Identities = 84/164 (51%), Positives = 110/164 (67%), Gaps = 15/164 (9%)
Frame = +1
Query: 190 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDT 369
S + IKCV VGDGAVGKTC+LISYT+N FP++YVPTVFDN++ V++ G LGL+DT
Sbjct: 2 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDT 61
Query: 370 AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEK---------------WVPEITH 504
AGQEDY+RLRPLSY DVFL+ FS++S +S+ENV +K W+PE+ H
Sbjct: 62 AGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKAIKSCRPLSLLSLHEWIPELRH 121
Query: 505 HQQKTPFLLVGTQIDLRDDPATMEKLAKIKQKPVSLEQGEKLAK 636
+ P +LVGT++DLRDD + P+S QGE+L K
Sbjct: 122 YAPGVPIILVGTKLDLRDDKQFF--VDHPGAVPISTAQGEELRK 163
>06_01_0907 +
7001946-7002050,7002389-7002476,7002606-7002679,
7002829-7002892,7004355-7004419,7004557-7004622,
7004725-7004757,7004968-7005045,7005295-7005303
Length = 193
Score = 154 bits (373), Expect = 7e-38
Identities = 77/151 (50%), Positives = 102/151 (67%)
Frame = +1
Query: 190 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDT 369
S + IKCV VGDGAVGKTC+LI YT+NKFP++YVPTVFDN++ V++ G LGL+DT
Sbjct: 4 SASRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYVPTVFDNFSANVVVDGTTVNLGLWDT 63
Query: 370 AGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQID 549
AGQEDY+RLRPLSY DVF++ FS+ W+PE+ H+ P +LVGT++D
Sbjct: 64 AGQEDYNRLRPLSYRGADVFVLAFSL------------WLPELQHYAPGVPIVLVGTKLD 111
Query: 550 LRDDPATMEKLAKIKQKPVSLEQGEKLAKEL 642
LR+D + L PV+ QGE+L K +
Sbjct: 112 LREDKHYL--LDHPSLVPVTTAQGEELRKHI 140
>01_01_0909 -
7163886-7163931,7164148-7164254,7164370-7164435,
7164720-7164784,7164937-7165000,7165685-7165794,
7165972-7166059,7166100-7166297
Length = 247
Score = 124 bits (299), Expect = 6e-29
Identities = 63/159 (39%), Positives = 96/159 (60%), Gaps = 2/159 (1%)
Frame = +1
Query: 166 CYIENYY*SKMQTIKCVVVGDG--AVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGG 339
C + Y +K T++C + +V ++ + +Y+PTVFDN++ V + G
Sbjct: 25 CMLICYTCNKFPTVECRAAANPFLSVLAPARRAGLSSLRLDLDYIPTVFDNFSANVSVDG 84
Query: 340 EPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT 519
LGL+DTAGQEDY RLRPLSY DVF++ FS++S +S+ENV++KW+PE+
Sbjct: 85 SVVNLGLWDTAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFAPGV 144
Query: 520 PFLLVGTQIDLRDDPATMEKLAKIKQKPVSLEQGEKLAK 636
P +LVGT++DLR+D A + ++ EQGE+L K
Sbjct: 145 PVVLVGTKLDLREDRAYLAD--HPASSIITTEQGEELRK 181
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = +1
Query: 205 IKCVVVGDGAVGKTCLLISYTTNKFPS 285
IKCV VGDGAVGKTC+LI YT NKFP+
Sbjct: 11 IKCVTVGDGAVGKTCMLICYTCNKFPT 37
>11_03_0182 +
11307275-11307368,11307485-11307594,11307654-11307856,
11307879-11307964,11308861-11308934,11308936-11309078,
11309485-11309594,11309645-11309787
Length = 320
Score = 78.2 bits (184), Expect = 5e-15
Identities = 38/78 (48%), Positives = 53/78 (67%)
Frame = +1
Query: 286 EYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSF 465
+Y+PTVFDN++ V + G LGL+ TAGQEDY RLR LSY D+F++ FS++S +S
Sbjct: 3 DYIPTVFDNFSANVSVDGNIINLGLWGTAGQEDYSRLRILSYRGADIFVLAFSLISRASH 62
Query: 466 ENVKEKWVPEITHHQQKT 519
ENV ++ E T H+ T
Sbjct: 63 ENVLKE--HEDTDHRYCT 78
>01_05_0340 -
21139885-21139978,21140169-21140272,21140379-21140534,
21140622-21140693,21140782-21140829,21140923-21140970,
21141807-21141879,21142333-21142346
Length = 202
Score = 71.3 bits (167), Expect = 6e-13
Identities = 42/146 (28%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 384
K +++GD VGK+CLL+ + + + Y+ T+ ++ + TV G+ L ++DTAGQE
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQER 69
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDLRDD 561
+ + Y +V + V SF NVK+ W+ EI + + LLVG + DL ++
Sbjct: 70 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYASENVNKLLVGNKCDLAEN 128
Query: 562 PATMEKLAKIKQKPVSLEQGEKLAKE 639
+ K + + E AK+
Sbjct: 129 RVVSYEAGKALADEIGIPFLETSAKD 154
>05_03_0590 -
15884485-15884489,15884702-15884790,15885086-15885251,
15885333-15885393,15886256-15886392,15887936-15888002
Length = 174
Score = 70.5 bits (165), Expect = 1e-12
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Frame = +1
Query: 202 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVT-VMIGGEPYTLGLFDTAGQ 378
+ K V++GDG VGKT L++ Y + F + TV +Y +++ G P TL ++DTAGQ
Sbjct: 14 SFKLVLLGDGRVGKTSLVLRYVNDVFSDKQEATVQASYLTKRLVVEGVPITLSIWDTAGQ 73
Query: 379 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQK 516
E + L P+ Y D L+ + + +F V KWV E+ K
Sbjct: 74 EKFHALGPIYYRDADAALLVYDITDNDTFLRV-TKWVKELKQMANK 118
>02_05_0161 +
26384079-26384086,26386173-26386226,26386376-26386448,
26386775-26386822,26386906-26386953,26387990-26388061,
26388156-26388311,26388428-26388531,26388628-26388724
Length = 219
Score = 69.3 bits (162), Expect = 2e-12
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 384
K +++GD VGK+CLL+ + + + Y+ T+ ++ + TV G+ L ++DTAGQE
Sbjct: 26 KLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQER 85
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDLRDD 561
+ + Y ++ + V SF NVK+ W+ EI + LLVG + DL +
Sbjct: 86 FRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASDNVNKLLVGNKSDLTAN 144
Query: 562 PATMEKLAK 588
+ AK
Sbjct: 145 KVVSSETAK 153
>01_01_0565 -
4159946-4160042,4160140-4160243,4160378-4160533,
4160629-4160700,4161796-4161843,4161923-4161970,
4162295-4162367,4163188-4163201
Length = 203
Score = 69.3 bits (162), Expect = 2e-12
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 384
K +++GD VGK+CLL+ + + + Y+ T+ ++ + TV G+ L ++DTAGQE
Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQER 69
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDLRDD 561
+ + Y ++ + V SF NVK+ W+ EI + LLVG + DL +
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASDNVNKLLVGNKSDLTAN 128
Query: 562 PATMEKLAK 588
+ AK
Sbjct: 129 KVVSSETAK 137
>06_03_0414 - 20548577-20549006,20553521-20553744
Length = 217
Score = 67.3 bits (157), Expect = 1e-11
Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 384
K V++GD VGK+ LL +T N+F E T+ +A ++ + G+ ++DTAGQE
Sbjct: 16 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQER 75
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDLR 555
Y + Y L+ + V S+FENV E+W+ E+ H +LVG + DLR
Sbjct: 76 YRAITSAYYRGAVGALLVYDVTRHSTFENV-ERWLKELRDHTDPNIVVMLVGNKSDLR 132
>07_03_0473 -
18525712-18525858,18526049-18526162,18526442-18526522,
18526787-18526865,18526902-18526996,18527092-18527170,
18527339-18527450,18527682-18527770,18527868-18527938,
18528846-18528962
Length = 327
Score = 66.5 bits (155), Expect = 2e-11
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Frame = +1
Query: 190 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFD 366
S + K V +GD +VGKT ++ + +KF + Y T+ D + T+ + L L+D
Sbjct: 5 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWD 64
Query: 367 TAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHQQKTPFLLVGTQ 543
TAGQE + L P + V ++ F V S SF N KW+ E+ T +LVG +
Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNT-SKWIEEVRTERGSDVIIVLVGNK 123
Query: 544 IDLRD 558
DL D
Sbjct: 124 TDLVD 128
>09_02_0464 - 9591139-9591571,9592601-9592818
Length = 216
Score = 64.5 bits (150), Expect = 7e-11
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 384
K V++GD VGK+ LL +T N+F E T+ +A ++ + + ++DTAGQE
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQER 73
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDLR 555
Y + Y LV + V +FENV E+W+ E+ H +LVG + DLR
Sbjct: 74 YRAITSAYYRGAVGALVVYDVTRHVTFENV-ERWLKELRDHTDANIVIMLVGNKADLR 130
>05_07_0127 - 27872803-27873238,27873842-27874059
Length = 217
Score = 64.1 bits (149), Expect = 9e-11
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 384
K V++GD VGK+ LL +T N+F E T+ +A ++ + + ++DTAGQE
Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQER 73
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDLRDD 561
Y + Y LV + V +FENV E+W+ E+ H +LVG + DLR
Sbjct: 74 YRAITSAYYRGAVGALVVYDVTRHVTFENV-ERWMRELKDHTDANIVIMLVGNKADLRHL 132
Query: 562 PATMEKLAK 588
A + AK
Sbjct: 133 RAVSTEDAK 141
>10_08_0250 -
16179646-16179759,16180197-16180325,16180519-16180640,
16181073-16181138,16182202-16182270,16182989-16183157
Length = 222
Score = 63.3 bits (147), Expect = 2e-10
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 7/127 (5%)
Frame = +1
Query: 202 TIKCVVVGDGAVGKTCLLISYTTNK----FPSEYVPTVFDNYAVTVM-IGGEPYTLGLFD 366
+ K +++GD VGK+ LL+S+ + PT+ ++ + + IGG+ L ++D
Sbjct: 19 SFKILLIGDSGVGKSSLLVSFVVAAAAAHLDDDIAPTIGVDFKIKFLTIGGKKLKLTIWD 78
Query: 367 TAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPF--LLVGT 540
TAGQE + + Y ++ + V SF N+ E W EI H +LVG
Sbjct: 79 TAGQERFRTITSSYYRGAQGIILVYDVTKRESFTNLAEVWSKEIESHSSNKDCIKMLVGN 138
Query: 541 QIDLRDD 561
+ID D+
Sbjct: 139 KIDKEDE 145
>10_03_0038 -
7297210-7297248,7297361-7297429,7297524-7297731,
7297829-7297911,7298859-7298998,7299132-7299183
Length = 196
Score = 63.3 bits (147), Expect = 2e-10
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 2/146 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPS-EYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 384
K V +GD VGK+CLL+ +T +F E + T + A V + G+ L ++DTAGQE
Sbjct: 10 KFVTIGDAGVGKSCLLLQFTDKRFREVEDLTTGVEYGACVVAVDGKNTKLQIWDTAGQEA 69
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDLRDD 561
+ + Y L+ + + +F N W+ + T H + +L+G + DL
Sbjct: 70 FRCITRSYYRGNAACLLVYDITRRETFFNHLASWLEDATQHASARMTIILIGNKCDLS-- 127
Query: 562 PATMEKLAKIKQKPVSLEQGEKLAKE 639
++ VS ++GE+ AKE
Sbjct: 128 ----------HRRVVSYQEGEQFAKE 143
>03_06_0407 -
33714563-33714636,33714966-33715152,33715943-33716093,
33716520-33716632,33717022-33717085,33717180-33717391,
33717540-33717621,33717811-33717866,33718004-33718072,
33718524-33718772,33718873-33719049,33719556-33719702,
33719794-33719926,33720093-33720307
Length = 642
Score = 63.3 bits (147), Expect = 2e-10
Identities = 33/121 (27%), Positives = 60/121 (49%)
Frame = +1
Query: 199 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 378
Q ++ VV+GD GK+ L++S T FP E VP V + + + + DT+
Sbjct: 14 QGVRVVVIGDPGTGKSSLVVSVATEAFP-ENVPRVMPPTRLPADYFPDRVPITIVDTSSS 72
Query: 379 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRD 558
++ D ++ ++ P++ E + W+PE+ Q K P ++VG ++DLRD
Sbjct: 73 PEHRAKLIAECQAADAVVLTYACDRPATLERLSTFWLPELRRLQLKAPVIVVGCKLDLRD 132
Query: 559 D 561
+
Sbjct: 133 E 133
Score = 41.9 bits (94), Expect = 4e-04
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 9/145 (6%)
Frame = +1
Query: 190 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFD 366
++ +C V G GKT LL S+ + PS+ +P + +A TV + G TL +F
Sbjct: 420 TQRNVFQCYVFGPRGAGKTALLQSF-LGRQPSDALPMNGERFAANTVELSGSRKTL-VFR 477
Query: 367 TAGQEDYDRLRPL-----SYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQ---KTP 522
++D +RPL S DV + + S++ ++ V TH + + P
Sbjct: 478 EIPEDD---VRPLLADRESLAPCDVAVFVYDSCDEFSWQRTRDLLVEVATHGENTGYEVP 534
Query: 523 FLLVGTQIDLRDDPATMEKLAKIKQ 597
L+V + DL P +++ ++ Q
Sbjct: 535 CLIVAAKDDLDQSPLALQESTRVSQ 559
>01_01_0893 +
7043130-7043182,7043309-7043335,7043461-7043560,
7045110-7045256,7045342-7045422,7045509-7045654,
7046030-7046099
Length = 207
Score = 63.3 bits (147), Expect = 2e-10
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Frame = +1
Query: 205 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 381
+K +++GD VGKT L+ Y KF ++Y T+ D V I +TL ++DTAGQE
Sbjct: 9 LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQE 68
Query: 382 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENV---KEKWVPEIT-HHQQKTPFLLVGTQID 549
+ L Y D ++ + V SFE + +E+++ + + + PF+++G +ID
Sbjct: 69 RFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVLGNKID 128
Query: 550 L 552
+
Sbjct: 129 V 129
>05_01_0036 + 253734-253904,255216-255707
Length = 220
Score = 62.9 bits (146), Expect = 2e-10
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 384
K V++GD VGK+ LL +T N+F E T+ +A T+ + G+ ++DTAGQE
Sbjct: 16 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQER 75
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDLR 555
Y + Y ++ + V P++F+N+ +W+ E+ H +LVG + DL+
Sbjct: 76 YRAITSAYYRGALGAVLVYDVSKPTTFDNI-SRWLKELRDHADANIRIMLVGNKTDLK 132
>03_01_0326 +
2535800-2535938,2536891-2536959,2537310-2537375,
2537979-2538100,2538501-2538629,2540462-2540569
Length = 210
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Frame = +1
Query: 202 TIKCVVVGDGAVGKTCLLISYTT-NKFPSEYVPTVFDNYAVTVM-IGGEPYTLGLFDTAG 375
+ K +++GD AVGK+ LL+S+ + + E PT+ ++ + + + G+ L ++DTAG
Sbjct: 12 SFKILLIGDSAVGKSSLLVSFVSASHIDDEIAPTIGVDFKIKFLTVNGKKLKLTIWDTAG 71
Query: 376 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH--QQKTPFLLVGTQID 549
QE + + Y ++ + V SF N+ + W EI H ++ +LVG ++D
Sbjct: 72 QERFRGITSSYYRGAHGIILVYDVTKRESFTNLADVWAKEIELHSTNKECIKMLVGNKVD 131
Query: 550 LRDD 561
++
Sbjct: 132 KNEE 135
>01_06_0712 + 31397167-31397402,31399823-31400252
Length = 221
Score = 62.9 bits (146), Expect = 2e-10
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 384
K V++GD VGK+ LL +T N+F E T+ +A ++ + G+ ++DTAGQE
Sbjct: 20 KTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQIWDTAGQER 79
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT-PFLLVGTQIDLR 555
Y + Y L+ + V ++F+NV +W+ E+ H + +LVG + DLR
Sbjct: 80 YRAITSAYYRGAVGALLVYDVTRRATFDNV-ARWLKELRDHTDPSIVVMLVGNKSDLR 136
>03_05_0601 +
26039326-26039367,26039958-26040035,26040136-26040303,
26040994-26041042,26041502-26041575,26041940-26041948
Length = 139
Score = 62.5 bits (145), Expect = 3e-10
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Frame = +1
Query: 190 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFD 366
+K++ K V++GD GK+ L++ + +F T+ + + T+ + E ++D
Sbjct: 7 NKIRNAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWD 66
Query: 367 TAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHQQKTPFLLVGTQ 543
TAGQE Y L P+ Y +V + + +P+SF K KWV E+ T L G +
Sbjct: 67 TAGQERYHSLAPMYYRGAAAAIVVYDITNPASFTRAK-KWVQELQAQGNSSTVVALAGNK 125
Query: 544 IDL 552
DL
Sbjct: 126 ADL 128
>05_06_0082 - 25425050-25425479,25426551-25426783
Length = 220
Score = 61.3 bits (142), Expect = 6e-10
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 384
K V++GD VGK+ LL +T N+F E T+ +A ++ + G+ ++DTAGQE
Sbjct: 19 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDTAGQER 78
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT-PFLLVGTQIDLR 555
Y + Y L+ + V ++F+NV +W+ E+ H + +L+G + DLR
Sbjct: 79 YRAITSAYYRGAVGALLVYDVTRRATFDNV-GRWLRELRDHTDPSIVCMLIGNKSDLR 135
>01_06_1343 - 36461476-36461961,36463355-36463519
Length = 216
Score = 61.3 bits (142), Expect = 6e-10
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 384
K V++GD VGK+ +L +T N+F E T+ +A T+ I G+ ++DTAGQE
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQIWDTAGQER 73
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDL 552
Y + Y L+ F + +F+NV ++W+ E+ H ++VG + DL
Sbjct: 74 YRAITSAYYRGAVGALLVFDITKRQTFDNV-QRWLRELRDHADANIVVMMVGNKSDL 129
>01_06_0186 + 27294973-27295211,27295610-27296045
Length = 224
Score = 59.3 bits (137), Expect = 3e-09
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 384
K V++GD VGK+ LL + ++F E T+ +A TV + ++DTAGQE
Sbjct: 21 KVVLIGDSGVGKSNLLSRFARDEFSLETRSTIGVEFATKTVRVDDRLVKAQIWDTAGQER 80
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDLR 555
Y + Y LV + V +FEN E+W+ E+ H +LVG + DLR
Sbjct: 81 YRAITSAYYRGAVGALVVYDVTRRITFENA-ERWLKELRDHTDANIVVMLVGNKADLR 137
>02_04_0402 +
22618998-22619043,22619206-22619345,22620067-22620149,
22620234-22620438,22620524-22620592,22621099-22621188
Length = 210
Score = 58.8 bits (136), Expect = 3e-09
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 2/146 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQED 384
K +++GD VGK+CLL+ +T +F + T+ + A + I +P L ++DTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQES 67
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDLRDD 561
+ + Y L+ + + +F ++ W+ + H +L+G + DL
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRETFNHL-ASWLEDARQHANANMTVMLIGNKCDLS-- 124
Query: 562 PATMEKLAKIKQKPVSLEQGEKLAKE 639
++ VS E+GE+ AKE
Sbjct: 125 ----------HRRAVSYEEGEQFAKE 140
>01_05_0673 +
24183512-24183514,24183625-24183694,24184203-24184259,
24184348-24184465,24185044-24185133,24185209-24185388,
24185474-24185551,24185642-24185711
Length = 221
Score = 58.8 bits (136), Expect = 3e-09
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Frame = +1
Query: 202 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQ 378
+ K V+VGDG GKT + + T +F +Y PT+ + + + +DTAGQ
Sbjct: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQ 72
Query: 379 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRD 558
E + LR Y ++ F V S +++NV W ++ + P +L G ++D+++
Sbjct: 73 EKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVKN 131
>05_07_0205 -
28402436-28402505,28402604-28402681,28402789-28402968,
28403051-28403140,28403258-28403375,28403461-28403517,
28404155-28404224,28404317-28404319
Length = 221
Score = 58.4 bits (135), Expect = 5e-09
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
Frame = +1
Query: 202 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQ 378
+ K V+VGDG GKT + + T +F +Y PT+ + + + +DTAGQ
Sbjct: 13 SFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQ 72
Query: 379 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRD 558
E + LR Y ++ F V S +++NV W ++ + P +L G ++D+++
Sbjct: 73 EKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNV-PTWHRDLCRVCENIPIVLCGNKVDVKN 131
>04_04_0191 +
23468410-23468455,23468560-23468699,23469119-23469201,
23469346-23469550,23469632-23469735,23470290-23470449
Length = 245
Score = 58.4 bits (135), Expect = 5e-09
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQED 384
K +++GD VGK+CLL+ +T +F + T+ + A + + P L ++DTAGQE
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITVDSRPVKLQIWDTAGQES 67
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDLRDD 561
+ + Y L+ + + +F ++ W+ + H +LVG + DL
Sbjct: 68 FRSITRSYYRGAAGALLVYDITRRETFNHL-ASWLEDARQHANANMTIMLVGNKSDLS-- 124
Query: 562 PATMEKLAKIKQKPVSLEQGEKLAKE 639
++ VS E+GE+ AKE
Sbjct: 125 ----------HRRAVSYEEGEQFAKE 140
>12_02_1213 +
27058329-27058370,27058634-27058711,27058807-27058974,
27059834-27059882,27060084-27060157,27060692-27060785,
27060924-27061003,27061311-27061322
Length = 198
Score = 58.0 bits (134), Expect = 6e-09
Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 2/123 (1%)
Frame = +1
Query: 190 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFD 366
+K++ K V++GD GK+ L++ + +F T+ + + T+ + E ++D
Sbjct: 7 NKIRNAKLVLLGDVGTGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWD 66
Query: 367 TAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHQQKTPFLLVGTQ 543
TAGQE Y L P+ Y +V + + + +SF K KWV E+ T L G +
Sbjct: 67 TAGQERYHSLAPMYYRGAAAAIVVYDITNAASFTRAK-KWVQELQAQGNPNTIMALAGNK 125
Query: 544 IDL 552
D+
Sbjct: 126 ADM 128
>09_06_0029 + 20336634-20336881,20337737-20338208
Length = 239
Score = 58.0 bits (134), Expect = 6e-09
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 384
K VVVGD AVGKT LL +T ++F + T+ + T+ + + ++DTAGQE
Sbjct: 24 KVVVVGDSAVGKTQLLGRFTKDEFFLDSKSTIGVEFQTRTLSLHRKRVKAQIWDTAGQER 83
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHQQKTPFLLVGTQIDLRDD 561
Y + Y +V + + +FENV +WV E+ H T L+G + D+
Sbjct: 84 YRAVTSAYYRGALGAMVVYDITRRRTFENV-ARWVEELRAHADGSTVVALIGNKADM--- 139
Query: 562 PATMEKLAKIKQKPVSLEQG 621
PA ++A + + EQG
Sbjct: 140 PAGRREVAADEAARFAEEQG 159
>06_03_1387 - 29820358-29821035
Length = 225
Score = 58.0 bits (134), Expect = 6e-09
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 384
K VV+GD AVGKT LL +T ++F + T+ + TV IGG+ ++DTAGQE
Sbjct: 9 KVVVIGDSAVGKTQLLGRFTKDEFFIDSKSTIGIEFQTRTVEIGGKRVKAQIWDTAGQER 68
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHQQKTPFLLVGTQIDL 552
Y + Y ++ + V S SF + +W+ ++ H +L+G + DL
Sbjct: 69 YRAVTSAYYRGALGAMLVYDVTSRRSFHHA-ARWLHDLRAHADNSIVVMLIGNKADL 124
>05_03_0286 - 11623575-11624063,11625098-11625262
Length = 217
Score = 58.0 bits (134), Expect = 6e-09
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 384
K V++GD VGK+ +L +T N F + T+ +A ++ + G+ ++DTAGQE
Sbjct: 14 KMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQER 73
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT-PFLLVGTQIDL 552
Y + Y L+ + + SF+NV +W+ E+ H + ++VG + DL
Sbjct: 74 YRAITSAYYRGAVGALLVYDITKRQSFDNV-HRWLRELRDHADSSIVIMMVGNKSDL 129
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 55.6 bits (128), Expect = 3e-08
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Frame = +1
Query: 202 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQ 378
+ K ++VGDG GKT + + T +F Y PT+ + + +DTAGQ
Sbjct: 441 SFKLILVGDGGTGKTTFVKRHITGEFEKRYEPTIGVEVRPLDFHTSRGKVRFCCWDTAGQ 500
Query: 379 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRD 558
E + LR Y ++ F V S +++NV W +I P +L G ++D+++
Sbjct: 501 EKFGGLRDGYYIHGHCAIIMFDVTSRLTYKNV-PTWHKDICRVCDNIPIVLCGNKVDMKN 559
>05_01_0037 -
256891-256998,257347-257502,257753-257824,258737-258784,
259071-259143,259237-259250
Length = 156
Score = 55.6 bits (128), Expect = 3e-08
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 387
K +++GD +VGK+CLL+ + + T+ + G+ L ++DTAGQE +
Sbjct: 10 KLLLIGDSSVGKSCLLLRFAKIR---------------TIELDGKTVKLQIWDTAGQERF 54
Query: 388 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPF-LLVGTQIDLRDDP 564
+ Y ++ + V SF NVK+ W+ EI + + LLVG + DL D
Sbjct: 55 RTITSSYYRGAHGIIIVYDVTDMESFNNVKQ-WLSEIDRYASDSVCKLLVGNKCDLVDSK 113
Query: 565 ATMEKLAKIKQKPVSLEQGEKLAKE 639
+ AK + + + E AKE
Sbjct: 114 VVDTEEAKAFAESLGISFLETSAKE 138
>09_02_0222 +
5968232-5968467,5970811-5971187,5972216-5972256,
5972808-5972843
Length = 229
Score = 55.2 bits (127), Expect = 4e-08
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 384
K V++GD AVGK+ LL + N+F + T+ + T+ I ++DTAGQE
Sbjct: 20 KVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQER 79
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT-PFLLVGTQIDL 552
Y + Y ++ + + SF++V +W+ E+ H K +L+G + DL
Sbjct: 80 YRAVTSAYYRGAVGAMLVYDITKRQSFDHV-ARWLEELRGHADKNIVIMLIGNKSDL 135
>07_03_1397 +
26269186-26269525,26269727-26269932,26270225-26270327,
26270570-26270577
Length = 218
Score = 52.0 bits (119), Expect = 4e-07
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQED 384
K V++GD +VGK+ LL + N+F T+ + ++I G+ ++DTAGQE
Sbjct: 16 KIVLLGDSSVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTAGQER 75
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI-THHQQKTPFLLVGTQIDLR 555
+ + Y L+ + + +F++V +W+ E+ TH +LVG + DL+
Sbjct: 76 FRAVTSAYYRGAVGALLVYDISRRQTFDSV-GRWLNELHTHSDMNVVTILVGNKTDLK 132
>03_06_0475 +
34193951-34194023,34195414-34195486,34195572-34195672,
34195912-34196009,34196326-34196388,34196534-34196626,
34196697-34196774
Length = 192
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +1
Query: 205 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 381
IK +++GD VGK+CLL+ ++ F + ++ T+ ++ + TV + G+ L ++DTAGQE
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQE 75
Query: 382 DY 387
+
Sbjct: 76 RF 77
>07_01_0926 -
7775536-7775616,7775695-7775787,7775903-7775965,
7776326-7776423,7776661-7776761,7776865-7776937,
7778575-7778647
Length = 193
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/62 (33%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Frame = +1
Query: 205 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQE 381
IK +++GD VGK+CLL+ ++ F + ++ T+ ++ + T+ + G+ L ++DTAGQE
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
Query: 382 DY 387
+
Sbjct: 76 RF 77
>08_02_1318 -
26111031-26111276,26112139-26112427,26112936-26113036,
26113628-26113878,26114842-26114865,26115793-26116129
Length = 415
Score = 50.8 bits (116), Expect = 9e-07
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM-IGGEPYTLGLFDTAGQED 384
K V++GD AVGK+ LL Y N+F T+ + M I G+ ++DTAGQE
Sbjct: 15 KVVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQSMDINGKDVKAQIWDTAGQER 74
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEI 498
+ + Y L+ + + S+F+NV +W+ E+
Sbjct: 75 FRAVTSAYYRGAFGALLVYDISRRSTFDNV-GRWLQEL 111
>03_06_0637 - 35219212-35219754,35220405-35220587
Length = 241
Score = 50.4 bits (115), Expect = 1e-06
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 20/136 (14%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM------------------- 330
K V++GD VGK+ LL +T N F + T+ +A +
Sbjct: 20 KIVLIGDSGVGKSNLLSRFTRNSFSLDSKSTIGVEFATRTIQYYCFPKGPLLNCFNFVTQ 79
Query: 331 IGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH- 507
+ G+ ++DTAGQE Y + Y L+ + V ++FENVK +W+ E+ H
Sbjct: 80 VEGKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVK-RWLKELRDHA 138
Query: 508 QQKTPFLLVGTQIDLR 555
+L+G +IDL+
Sbjct: 139 DSNIVVMLIGNKIDLK 154
>03_06_0501 -
34380155-34380637,34380961-34381029,34382206-34382229,
34382622-34382786
Length = 246
Score = 39.1 bits (87), Expect(2) = 2e-06
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 331 IGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH- 507
I G+ ++DTAGQE Y + Y L+ + + +FEN+ ++W+ E+ H
Sbjct: 87 IEGQTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENI-QRWLRELRDHA 145
Query: 508 QQKTPFLLVGTQIDL 552
++VG + DL
Sbjct: 146 DSNIVIMMVGNKSDL 160
Score = 30.3 bits (65), Expect(2) = 2e-06
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVM 330
K V++GD VGK+ +L +T N+F E T+ +A +
Sbjct: 14 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTL 54
>05_06_0080 +
25420371-25420423,25420681-25420780,25421742-25421888,
25421959-25422039,25422147-25422296
Length = 176
Score = 45.6 bits (103), Expect = 3e-05
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Frame = +1
Query: 262 YTTNKFPSEYVPTVFDNYAVT-VMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVC 438
Y KF ++Y T+ ++ V +TL ++DTAGQE + L Y D ++
Sbjct: 19 YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLV 78
Query: 439 FSVVSPSSFENV---KEKWVPEIT-HHQQKTPFLLVGTQIDL 552
+ V S SF+N+ +E+++ + + PF+L+G ++D+
Sbjct: 79 YDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVLLGNKVDV 120
>05_06_0217 +
26457847-26457902,26458336-26458435,26458551-26458697,
26459040-26459120,26459251-26459396,26459509-26459572
Length = 197
Score = 44.8 bits (101), Expect = 6e-05
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 6/126 (4%)
Frame = +1
Query: 262 YTTNKFPSEYVPTVFDNYAVT-VMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVC 438
Y KF +Y T+ ++ V+I TL ++DTAGQE + L Y D ++
Sbjct: 20 YVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQERFQSLGVAFYRGADCCMLV 79
Query: 439 FSVVSPSSFENVKEKWVPEITHHQQKT-----PFLLVGTQIDLRDDPATMEKLAKIKQKP 603
+ V + SF N W E + PF+L+G +ID+ D + + K K
Sbjct: 80 YDVNAKRSF-NALNTWHDEFLTQASPSDPKHFPFILLGNKIDI--DAGNRRAIPEKKAKE 136
Query: 604 VSLEQG 621
+ +G
Sbjct: 137 WCVSKG 142
>06_03_1187 +
28267535-28267568,28267620-28267645,28267808-28267975,
28268148-28268196,28268329-28268402,28268512-28268841
Length = 226
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +1
Query: 352 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFL- 528
L ++DTAGQE Y L P+ Y +V + + S S+ + KWV E+ +Q P L
Sbjct: 42 LDIWDTAGQERYHSLAPMYYRGAAAAVVVYDISSTDSYIRAR-KWVDEL--QRQGNPHLV 98
Query: 529 --LVGTQIDLRD 558
LVG ++DL +
Sbjct: 99 MALVGNKVDLEE 110
>03_01_0365 -
2839190-2839251,2839637-2839694,2839946-2840032,
2840117-2840206,2840575-2840650,2840877-2840971,
2841090-2841173,2841270-2841343,2841803-2841827
Length = 216
Score = 41.9 bits (94), Expect = 4e-04
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Frame = +1
Query: 190 SKMQTIKCVVVGDGAVGKTCLLISYTTNKF-PSEYVPTVFDNYAVTVMIGGEPYT-LGLF 363
SK K V++GD VGK+C+++ + +F P+ V + T+ + ++
Sbjct: 27 SKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTIVKFEIW 86
Query: 364 DTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGT 540
DTAGQE +V + + SP SF + WV E+ H +LVG
Sbjct: 87 DTAGQE----------RGAAAAVVVYDITSPESFSKA-QYWVKELQKHGSPDIIMVLVGN 135
Query: 541 QIDLRDD 561
+ DL ++
Sbjct: 136 KADLHEN 142
>05_05_0118 -
22504483-22504566,22504650-22504742,22504852-22504914,
22505048-22505145,22505378-22505478,22505581-22505653,
22505872-22505910,22506946-22507018
Length = 207
Score = 41.1 bits (92), Expect = 7e-04
Identities = 17/52 (32%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +1
Query: 235 VGKTCLLISYTTNKFPSEYVPTVFDNYAV-TVMIGGEPYTLGLFDTAGQEDY 387
VGK+CLL+ ++ F + ++ T+ ++ + T+ + G+ L ++DTAGQE +
Sbjct: 39 VGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 90
>10_06_0181 - 11532765-11533203,11536867-11537036
Length = 202
Score = 39.1 bits (87), Expect = 0.003
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Frame = +1
Query: 208 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 387
K V++GD AVGK+ +L + N+F D+ A T+ + + TL L D Y
Sbjct: 12 KVVLIGDSAVGKSQILARFARNEFS-------IDSKA-TIGVEFQTRTL-LID----HKY 58
Query: 388 DRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKT-PFLLVGTQIDLRDDP 564
+ Y L+ + + SF+++ +W+ E+ H K +LVG + DL D+
Sbjct: 59 RAVTSAYYRGALGALLVYDITKRQSFDHI-PRWLEELRGHADKNIVIMLVGNKSDLEDER 117
Query: 565 ATMEKLAK 588
A + AK
Sbjct: 118 AVSTEDAK 125
>01_06_1314 +
36215607-36215734,36215911-36216043,36216135-36216281,
36217172-36217348,36217469-36217717,36217917-36217964,
36218364-36218419,36218639-36218720,36219260-36219515,
36219563-36219629,36219688-36219724,36219918-36220030,
36220838-36220988,36221352-36221538,36221768-36221841
Length = 634
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/47 (29%), Positives = 28/47 (59%)
Frame = +1
Query: 421 DVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQIDLRDD 561
DV ++ ++ P++ E + W PE+ Q + P ++VG ++DLR +
Sbjct: 58 DVVVLTYACDQPATLERLSSFWFPELRRLQLEAPVIVVGCKLDLRGE 104
>10_08_0165 +
15356748-15356811,15357113-15357186,15357311-15357394,
15357508-15357602,15357737-15357790,15357791-15357896,
15358236-15358277,15358585-15358674,15358788-15358984,
15359355-15359413,15360166-15362252
Length = 983
Score = 37.1 bits (82), Expect = 0.012
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 20/121 (16%)
Frame = +1
Query: 205 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTL--GLFDTAGQ 378
+K V++GD VGK+C+++ + +F TV ++ + + T+ ++DTAGQ
Sbjct: 45 VKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTLALEDSTTVKFEIWDTAGQ 104
Query: 379 ED------------------YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH 504
E Y L PL Y +V + + S SF N + WV
Sbjct: 105 ESICVAIRYQRSHENWLIFRYAALAPLYYRGAGAAIVVYDITSSESF-NKAQYWVKMYVD 163
Query: 505 H 507
H
Sbjct: 164 H 164
>07_03_0638 +
20196216-20196650,20196810-20196930,20197072-20197168,
20197284-20197323,20197648-20197731,20198966-20199130
Length = 313
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 1/117 (0%)
Frame = +1
Query: 202 TIKCVVVGDGAVGKTCLLISYT-TNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQ 378
++K ++GD +GKT ++ Y ++ + T + T+ + G ++D AG
Sbjct: 128 SLKVSLLGDCQIGKTSFMVKYVGDDEEQNGLQMTGLNLMDKTLAVRGARIAFSIWDVAGD 187
Query: 379 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHQQKTPFLLVGTQID 549
+ P++ L F + S + NV + W + +L+GT+ D
Sbjct: 188 SQFLDHVPIACKDAVAILYMFDLTSRCTLTNVID-WYERARKWNKTAIPILIGTKFD 243
>03_06_0408 -
33722741-33722893,33723174-33723350,33723798-33723947,
33724085-33724145,33724338-33724558
Length = 253
Score = 31.5 bits (68), Expect = 0.59
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Frame = +1
Query: 205 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQED 384
++ V+GD GK+ L+ + T +FP + D+ V+ P L + D
Sbjct: 15 VRVAVIGDHGTGKSSLVATIATGRFPDQ------DDGVARVL---PPARLPV-------D 58
Query: 385 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-QQKTPFLLVGTQIDLRD 558
Y P P T + + P++ E + W+P+I Q K P +L G ++DL D
Sbjct: 59 YF---PARVPVT----IVDTSSRPNTLERITTFWLPKIRRLLQSKVPVILAGCKVDLSD 110
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 31.1 bits (67), Expect = 0.78
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Frame = +1
Query: 313 YAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSV---VSPSSFE---NV 474
Y V V + G P+ DT G E + +R TD+ ++ S V P + E +
Sbjct: 467 YQVIVQVDGNPHACVFLDTPGHEAFGAMRARGARVTDICIIVVSADDGVRPQTNEAIAHA 526
Query: 475 KEKWVPEITHHQQKTPFLLVGTQIDLRDDPATMEKLAKIKQKPVSLE--QGEKLAKEL 642
K VP I K FL++ + I + + + + K + E E++ +EL
Sbjct: 527 KAAGVP-IVIAINKVYFLVISSSITVVKRKILLSCFSNLLIKQIDKEGANAERVMQEL 583
>03_01_0647 +
4745788-4745907,4746510-4746591,4746847-4746958,
4747607-4747697,4747805-4747969
Length = 189
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 190 SKMQTIKCVVVGDGAVGKTCLLISYTTNKFPSEY 291
S + K V +GD AVGKT ++ + +KF + Y
Sbjct: 6 SALAKYKLVFLGDQAVGKTAIITRFMYDKFDATY 39
>02_03_0084 -
15041261-15041437,15041625-15041765,15042857-15042946,
15043111-15043201,15043953-15044155,15045361-15045438,
15045535-15045651,15046111-15046161,15046405-15046500,
15046726-15046742,15046938-15047064,15050585-15050681,
15051565-15051638,15051910-15051993,15052099-15052290,
15054191-15054319,15055607-15055639,15055747-15055843,
15055940-15055990,15057494-15057564,15058305-15058455,
15058625-15058703,15059265-15059346,15060335-15060335,
15060565-15060620,15060969-15061018,15061511-15061580
Length = 834
Score = 27.5 bits (58), Expect = 9.7
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +3
Query: 423 CISCLLQCSKS*FF*KCEGKVG 488
C+ CL+ C + ++ KC G++G
Sbjct: 30 CLVCLVTCEQKVYYLKCSGQLG 51
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,355,937
Number of Sequences: 37544
Number of extensions: 334995
Number of successful extensions: 854
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -