Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_F03
         (281 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047704-1|AAH47704.1|  183|Homo sapiens SPATA3 protein protein.       28   4.8  
AY032925-1|AAK54455.1|  183|Homo sapiens testis and spermatogene...    28   4.8  
AK093385-1|BAC04149.1|  192|Homo sapiens protein ( Homo sapiens ...    28   4.8  

>BC047704-1|AAH47704.1|  183|Homo sapiens SPATA3 protein protein.
          Length = 183

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +3

Query: 15  GKRKPNMLVFRLRKE*RKPSSHLN 86
           G+  PN+L F  RK  RKPSSH N
Sbjct: 138 GRGLPNLLTF-YRKSSRKPSSHRN 160


>AY032925-1|AAK54455.1|  183|Homo sapiens testis and spermatogenesis
           cell apoptosis related protein 1 protein.
          Length = 183

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +3

Query: 15  GKRKPNMLVFRLRKE*RKPSSHLN 86
           G+  PN+L F  RK  RKPSSH N
Sbjct: 138 GRGLPNLLTF-YRKSSRKPSSHRN 160


>AK093385-1|BAC04149.1|  192|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36066 fis, clone TESTI2019257. ).
          Length = 192

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +3

Query: 15  GKRKPNMLVFRLRKE*RKPSSHLN 86
           G+  PN+L F  RK  RKPSSH N
Sbjct: 147 GRGLPNLLTF-YRKSSRKPSSHRN 169


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,681,846
Number of Sequences: 237096
Number of extensions: 472344
Number of successful extensions: 753
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 753
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1386033866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)