Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_F03
         (281 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88184-14|AAK31520.1|  821|Caenorhabditis elegans Hypothetical p...    26   3.6  
U28992-6|AAO38603.1| 1163|Caenorhabditis elegans Hypothetical pr...    26   4.8  
U28992-5|AAO38602.1| 1185|Caenorhabditis elegans Hypothetical pr...    26   4.8  
Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical pr...    25   8.4  

>U88184-14|AAK31520.1|  821|Caenorhabditis elegans Hypothetical
           protein F36H5.1 protein.
          Length = 821

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 78  EKKASFTLFLNGIPTYSAFSCHT 10
           E + +FTL +   P YS   CHT
Sbjct: 674 EARVNFTLLIEPQPEYSFIMCHT 696


>U28992-6|AAO38603.1| 1163|Caenorhabditis elegans Hypothetical
           protein T05C1.4b protein.
          Length = 1163

 Score = 25.8 bits (54), Expect = 4.8
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = +3

Query: 126 IILKRRPSSQREVSASHMSTL 188
           + L+R+PS+  E+ A+H+ T+
Sbjct: 289 VALRRQPSANSEIDANHIGTM 309


>U28992-5|AAO38602.1| 1185|Caenorhabditis elegans Hypothetical
           protein T05C1.4a protein.
          Length = 1185

 Score = 25.8 bits (54), Expect = 4.8
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = +3

Query: 126 IILKRRPSSQREVSASHMSTL 188
           + L+R+PS+  E+ A+H+ T+
Sbjct: 289 VALRRQPSANSEIDANHIGTM 309


>Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical
           protein F10F2.2 protein.
          Length = 1343

 Score = 25.0 bits (52), Expect = 8.4
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +2

Query: 116 RDIDHTEASAIITAGGVGFSYVNLRL 193
           RDI  T   A   AG VG+S+ NL L
Sbjct: 324 RDIHATGRGAYEIAGTVGYSFGNLNL 349


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,085,991
Number of Sequences: 27780
Number of extensions: 73964
Number of successful extensions: 152
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 259761072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)