Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0005_F02
         (658 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           26   0.91 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   4.9  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     23   8.5  

>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 9/45 (20%), Positives = 24/45 (53%)
 Frame = +1

Query: 190 KHSIPEHETIAIIWQCVMSRGEWNKKEELLAEQAAKHLRHYTPLL 324
           K +  +++T   +W+ +++   WN++    A +  K+   + P+L
Sbjct: 5   KQNASDNKTTEALWKLILAPYGWNEQMNEAAREFLKNYPDFIPML 49


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = -1

Query: 322 TAVCNVGDAWPLARLVT-PPSCSTRL 248
           T  C V D   L   V+ PP+CSTRL
Sbjct: 387 TIRCCVPDLKSLREFVSRPPACSTRL 412


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 12/64 (18%), Positives = 31/64 (48%)
 Frame = +1

Query: 190 KHSIPEHETIAIIWQCVMSRGEWNKKEELLAEQAAKHLRHYTPLLAAFAQSAKAELALLS 369
           K +   + T   +W+ +++   W   +E + E A + L++Y+  +      +  ++ L S
Sbjct: 5   KQNASNNTTEEALWKLILAPYGW---DEQMNEAAREFLKNYSDFIPMLIGQSHYKIDLRS 61

Query: 370 KVQE 381
            ++E
Sbjct: 62  LIKE 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,330
Number of Sequences: 2352
Number of extensions: 8059
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)